| Literature DB >> 22606196 |
Sammer Yousuf, Muhammad Arshad, Hafiza Madiha Butt, Sumayya Saeed, Fatima Z Basha.
Abstract
The crystal structure of the title compound, C(8)H(6)FN(3)O, is stabilized by C-H⋯O hydrogen bonds, which link the mol-ecules into chains running parallel to the a axis.Entities:
Year: 2012 PMID: 22606196 PMCID: PMC3344193 DOI: 10.1107/S1600536812013426
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H6FN3O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2831 reflections |
| θ = 2.3–27.8° | |
| µ = 0.12 mm−1 | |
| Block, colourless | |
| 0.35 × 0.28 × 0.20 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 1476 independent reflections |
| Radiation source: fine-focus sealed tube | 1239 reflections with |
| Graphite monochromator | |
| ω scan | θmax = 25.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 8606 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1476 reflections | (Δ/σ)max < 0.001 |
| 118 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.61761 (8) | 0.03188 (12) | 0.73973 (5) | 0.0358 (3) | |
| N1 | 0.77319 (12) | −0.13811 (15) | 0.83252 (7) | 0.0361 (3) | |
| N2 | 0.68380 (11) | −0.09577 (14) | 0.87237 (7) | 0.0336 (3) | |
| N3 | 0.60363 (13) | −0.07646 (17) | 0.91283 (7) | 0.0451 (4) | |
| C1 | 0.89336 (12) | 0.19093 (16) | 0.64990 (8) | 0.0305 (3) | |
| H1B | 0.9536 | 0.1521 | 0.6830 | 0.037* | |
| C2 | 0.92779 (14) | 0.28254 (17) | 0.58742 (8) | 0.0348 (4) | |
| H2A | 1.0106 | 0.3060 | 0.5782 | 0.042* | |
| C3 | 0.83684 (14) | 0.33759 (17) | 0.53966 (8) | 0.0342 (3) | |
| C4 | 0.71318 (14) | 0.30861 (18) | 0.55138 (8) | 0.0366 (4) | |
| H4A | 0.6536 | 0.3492 | 0.5182 | 0.044* | |
| C5 | 0.67981 (13) | 0.21777 (17) | 0.61363 (8) | 0.0333 (3) | |
| H5A | 0.5965 | 0.1968 | 0.6227 | 0.040* | |
| C6 | 0.76889 (12) | 0.15677 (16) | 0.66330 (7) | 0.0273 (3) | |
| C7 | 0.72692 (12) | 0.05618 (16) | 0.72799 (7) | 0.0277 (3) | |
| C8 | 0.82354 (13) | −0.01705 (17) | 0.78080 (8) | 0.0313 (3) | |
| H8A | 0.8882 | −0.0650 | 0.7499 | 0.038* | |
| H8B | 0.8611 | 0.0669 | 0.8110 | 0.038* | |
| F1 | 0.87045 (9) | 0.42468 (11) | 0.47751 (5) | 0.0478 (3) |
| O1 | 0.0225 (6) | 0.0481 (6) | 0.0370 (5) | −0.0033 (4) | −0.0003 (4) | −0.0021 (5) |
| N1 | 0.0337 (7) | 0.0341 (7) | 0.0405 (7) | 0.0037 (5) | 0.0029 (6) | 0.0004 (5) |
| N2 | 0.0346 (7) | 0.0329 (7) | 0.0333 (6) | −0.0019 (5) | −0.0049 (6) | 0.0031 (5) |
| N3 | 0.0413 (8) | 0.0548 (9) | 0.0392 (7) | 0.0024 (7) | 0.0065 (6) | 0.0069 (6) |
| C1 | 0.0248 (7) | 0.0338 (8) | 0.0328 (7) | 0.0029 (6) | −0.0019 (6) | −0.0054 (6) |
| C2 | 0.0293 (8) | 0.0374 (8) | 0.0376 (7) | −0.0015 (6) | 0.0049 (6) | −0.0064 (6) |
| C3 | 0.0414 (9) | 0.0314 (7) | 0.0299 (7) | −0.0013 (6) | 0.0036 (6) | −0.0031 (6) |
| C4 | 0.0355 (9) | 0.0378 (8) | 0.0366 (8) | 0.0021 (6) | −0.0068 (6) | −0.0006 (6) |
| C5 | 0.0260 (7) | 0.0343 (8) | 0.0394 (8) | 0.0003 (6) | −0.0025 (6) | −0.0041 (6) |
| C6 | 0.0241 (7) | 0.0274 (7) | 0.0304 (7) | 0.0011 (6) | 0.0005 (5) | −0.0075 (5) |
| C7 | 0.0232 (7) | 0.0287 (7) | 0.0313 (7) | 0.0004 (5) | −0.0009 (5) | −0.0098 (5) |
| C8 | 0.0254 (7) | 0.0336 (7) | 0.0348 (7) | −0.0004 (6) | 0.0003 (6) | −0.0012 (6) |
| F1 | 0.0544 (6) | 0.0501 (6) | 0.0389 (5) | −0.0045 (4) | 0.0040 (4) | 0.0089 (4) |
| O1—C7 | 1.2154 (16) | C3—C4 | 1.373 (2) |
| N1—N2 | 1.2425 (17) | C4—C5 | 1.377 (2) |
| N1—C8 | 1.4652 (19) | C4—H4A | 0.9300 |
| N2—N3 | 1.1296 (17) | C5—C6 | 1.3936 (19) |
| C1—C2 | 1.387 (2) | C5—H5A | 0.9300 |
| C1—C6 | 1.3942 (19) | C6—C7 | 1.4826 (19) |
| C1—H1B | 0.9300 | C7—C8 | 1.5229 (19) |
| C2—C3 | 1.370 (2) | C8—H8A | 0.9700 |
| C2—H2A | 0.9300 | C8—H8B | 0.9700 |
| C3—F1 | 1.3591 (16) | ||
| N2—N1—C8 | 115.85 (12) | C4—C5—H5A | 119.5 |
| N3—N2—N1 | 170.98 (14) | C6—C5—H5A | 119.5 |
| C2—C1—C6 | 120.33 (13) | C5—C6—C1 | 119.02 (13) |
| C2—C1—H1B | 119.8 | C5—C6—C7 | 118.29 (12) |
| C6—C1—H1B | 119.8 | C1—C6—C7 | 122.69 (12) |
| C3—C2—C1 | 118.38 (13) | O1—C7—C6 | 121.43 (12) |
| C3—C2—H2A | 120.8 | O1—C7—C8 | 119.67 (12) |
| C1—C2—H2A | 120.8 | C6—C7—C8 | 118.90 (11) |
| F1—C3—C2 | 118.53 (13) | N1—C8—C7 | 113.59 (12) |
| F1—C3—C4 | 118.33 (13) | N1—C8—H8A | 108.8 |
| C2—C3—C4 | 123.14 (14) | C7—C8—H8A | 108.8 |
| C3—C4—C5 | 118.09 (14) | N1—C8—H8B | 108.8 |
| C3—C4—H4A | 121.0 | C7—C8—H8B | 108.8 |
| C5—C4—H4A | 121.0 | H8A—C8—H8B | 107.7 |
| C4—C5—C6 | 121.04 (13) | ||
| C6—C1—C2—C3 | −0.2 (2) | C2—C1—C6—C7 | 178.42 (12) |
| C1—C2—C3—F1 | −178.68 (12) | C5—C6—C7—O1 | −2.87 (19) |
| C1—C2—C3—C4 | 1.1 (2) | C1—C6—C7—O1 | 177.86 (12) |
| F1—C3—C4—C5 | 178.78 (12) | C5—C6—C7—C8 | 177.46 (12) |
| C2—C3—C4—C5 | −1.0 (2) | C1—C6—C7—C8 | −1.81 (18) |
| C3—C4—C5—C6 | −0.1 (2) | N2—N1—C8—C7 | −54.22 (16) |
| C4—C5—C6—C1 | 1.0 (2) | O1—C7—C8—N1 | 11.84 (17) |
| C4—C5—C6—C7 | −178.34 (12) | C6—C7—C8—N1 | −168.49 (11) |
| C2—C1—C6—C5 | −0.84 (19) |
| H··· | ||||
| C1—H1 | 0.93 | 2.45 | 3.3722 (17) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1 | 0.93 | 2.45 | 3.3722 (17) | 174 |
Symmetry code: (i) .