| Literature DB >> 22606156 |
Abstract
In the title mol-ecule, C(11)H(14)ClN(3)O(2), the morpholine ring has a chair conformation. In the crystal, pairs of mol-ecules are linked into inversion dimers by N-H⋯O hydrogen bonds.Entities:
Year: 2012 PMID: 22606156 PMCID: PMC3344153 DOI: 10.1107/S1600536812012615
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H14ClN3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1502 reflections |
| θ = 3.0–27.5° | |
| µ = 0.30 mm−1 | |
| β = 94.03 (3)° | Block, colorless |
| 0.22 × 0.20 × 0.19 mm | |
| Bruker SMART CCD diffractometer | 1502 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 27.5°, θmin = 3.0° |
| φ and ω scans | |
| 11894 measured reflections | |
| 2857 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2857 reflections | (Δ/σ)max < 0.001 |
| 154 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.92775 (5) | 0.08842 (12) | 0.30739 (8) | 0.0988 (4) | |
| O2 | 1.39233 (12) | 0.0438 (2) | 0.09026 (16) | 0.0612 (5) | |
| C6 | 1.18312 (16) | 0.0784 (3) | 0.0412 (2) | 0.0493 (6) | |
| N3 | 1.25450 (14) | 0.0646 (2) | −0.0549 (2) | 0.0561 (5) | |
| H3A | 1.2345 | 0.0708 | −0.1403 | 0.067* | |
| N1 | 1.35490 (13) | 0.0024 (2) | −0.26930 (19) | 0.0535 (5) | |
| O1 | 1.35069 (15) | −0.0687 (2) | −0.55127 (17) | 0.0697 (5) | |
| N2 | 1.40369 (14) | 0.0221 (3) | −0.1380 (2) | 0.0656 (6) | |
| H2A | 1.4667 | 0.0212 | −0.1292 | 0.079* | |
| C5 | 1.35207 (17) | 0.0425 (3) | −0.0260 (2) | 0.0504 (6) | |
| C8 | 1.1131 (2) | 0.0212 (3) | 0.2519 (3) | 0.0674 (7) | |
| H8A | 1.1185 | −0.0217 | 0.3381 | 0.081* | |
| C11 | 1.09794 (16) | 0.1525 (3) | −0.0004 (3) | 0.0592 (6) | |
| H11A | 1.0931 | 0.1986 | −0.0850 | 0.071* | |
| C9 | 1.02870 (18) | 0.0905 (3) | 0.2072 (3) | 0.0644 (7) | |
| C10 | 1.02095 (18) | 0.1582 (3) | 0.0826 (3) | 0.0672 (7) | |
| H10A | 0.9641 | 0.2076 | 0.0543 | 0.081* | |
| C7 | 1.19009 (18) | 0.0152 (3) | 0.1684 (2) | 0.0608 (7) | |
| H7A | 1.2474 | −0.0321 | 0.1986 | 0.073* | |
| C3 | 1.3409 (2) | 0.0735 (3) | −0.5071 (3) | 0.0734 (8) | |
| H3B | 1.2720 | 0.0954 | −0.5020 | 0.088* | |
| H3C | 1.3669 | 0.1373 | −0.5739 | 0.088* | |
| C4 | 1.3938 (2) | 0.0989 (3) | −0.3690 (3) | 0.0666 (7) | |
| H4A | 1.4634 | 0.0822 | −0.3741 | 0.080* | |
| H4B | 1.3847 | 0.1972 | −0.3409 | 0.080* | |
| C2 | 1.3146 (2) | −0.1633 (3) | −0.4542 (2) | 0.0763 (8) | |
| H2B | 1.3226 | −0.2609 | −0.4849 | 0.092* | |
| H2C | 1.2451 | −0.1462 | −0.4478 | 0.092* | |
| C1 | 1.3671 (2) | −0.1449 (3) | −0.3145 (3) | 0.0709 (8) | |
| H1A | 1.3404 | −0.2101 | −0.2496 | 0.085* | |
| H1B | 1.4362 | −0.1662 | −0.3191 | 0.085* |
| Cl1 | 0.0664 (5) | 0.1530 (10) | 0.0797 (6) | −0.0135 (5) | 0.0244 (4) | −0.0336 (5) |
| O2 | 0.0541 (9) | 0.0801 (13) | 0.0483 (10) | 0.0043 (8) | −0.0044 (8) | −0.0082 (8) |
| C6 | 0.0484 (12) | 0.0545 (15) | 0.0446 (12) | 0.0017 (10) | 0.0000 (10) | −0.0067 (10) |
| N3 | 0.0462 (10) | 0.0747 (15) | 0.0468 (11) | 0.0059 (9) | −0.0007 (8) | −0.0015 (9) |
| N1 | 0.0532 (11) | 0.0632 (14) | 0.0438 (10) | 0.0018 (9) | 0.0020 (9) | −0.0021 (9) |
| O1 | 0.0918 (13) | 0.0737 (13) | 0.0449 (9) | 0.0106 (10) | 0.0143 (9) | 0.0027 (9) |
| N2 | 0.0474 (11) | 0.0996 (19) | 0.0493 (11) | 0.0054 (11) | −0.0004 (9) | −0.0114 (11) |
| C5 | 0.0500 (12) | 0.0519 (15) | 0.0488 (13) | 0.0021 (10) | 0.0005 (10) | −0.0025 (10) |
| C8 | 0.0644 (15) | 0.090 (2) | 0.0474 (13) | −0.0009 (15) | 0.0025 (12) | −0.0051 (13) |
| C11 | 0.0540 (13) | 0.0626 (17) | 0.0605 (14) | 0.0053 (12) | 0.0002 (11) | 0.0021 (13) |
| C9 | 0.0565 (14) | 0.080 (2) | 0.0576 (15) | −0.0081 (13) | 0.0085 (12) | −0.0203 (14) |
| C10 | 0.0518 (13) | 0.073 (2) | 0.0767 (18) | 0.0061 (13) | 0.0022 (13) | −0.0102 (15) |
| C7 | 0.0557 (13) | 0.0742 (19) | 0.0519 (14) | 0.0092 (13) | 0.0002 (11) | −0.0006 (13) |
| C3 | 0.093 (2) | 0.069 (2) | 0.0590 (16) | 0.0070 (16) | 0.0062 (14) | 0.0129 (14) |
| C4 | 0.0748 (17) | 0.0613 (18) | 0.0641 (16) | −0.0030 (13) | 0.0083 (13) | 0.0052 (13) |
| C2 | 0.111 (2) | 0.0663 (19) | 0.0530 (15) | −0.0077 (17) | 0.0139 (15) | −0.0052 (13) |
| C1 | 0.103 (2) | 0.0593 (17) | 0.0501 (13) | 0.0035 (16) | 0.0059 (14) | 0.0055 (12) |
| Cl1—C9 | 1.748 (3) | C8—H8A | 0.9300 |
| O2—C5 | 1.226 (3) | C11—C10 | 1.374 (3) |
| C6—C7 | 1.373 (3) | C11—H11A | 0.9300 |
| C6—C11 | 1.392 (3) | C9—C10 | 1.369 (4) |
| C6—N3 | 1.407 (3) | C10—H10A | 0.9300 |
| N3—C5 | 1.361 (3) | C7—H7A | 0.9300 |
| N3—H3A | 0.8600 | C3—C4 | 1.503 (4) |
| N1—N2 | 1.414 (3) | C3—H3B | 0.9700 |
| N1—C4 | 1.456 (3) | C3—H3C | 0.9700 |
| N1—C1 | 1.461 (3) | C4—H4A | 0.9700 |
| O1—C3 | 1.409 (4) | C4—H4B | 0.9700 |
| O1—C2 | 1.411 (3) | C2—C1 | 1.505 (4) |
| N2—C5 | 1.356 (3) | C2—H2B | 0.9700 |
| N2—H2A | 0.8600 | C2—H2C | 0.9700 |
| C8—C9 | 1.369 (4) | C1—H1A | 0.9700 |
| C8—C7 | 1.377 (4) | C1—H1B | 0.9700 |
| C7—C6—C11 | 118.8 (2) | C6—C7—C8 | 120.7 (2) |
| C7—C6—N3 | 123.8 (2) | C6—C7—H7A | 119.7 |
| C11—C6—N3 | 117.3 (2) | C8—C7—H7A | 119.7 |
| C5—N3—C6 | 126.35 (19) | O1—C3—C4 | 112.0 (2) |
| C5—N3—H3A | 116.8 | O1—C3—H3B | 109.2 |
| C6—N3—H3A | 116.8 | C4—C3—H3B | 109.2 |
| N2—N1—C4 | 110.6 (2) | O1—C3—H3C | 109.2 |
| N2—N1—C1 | 109.9 (2) | C4—C3—H3C | 109.2 |
| C4—N1—C1 | 109.2 (2) | H3B—C3—H3C | 107.9 |
| C3—O1—C2 | 110.0 (2) | N1—C4—C3 | 109.0 (2) |
| C5—N2—N1 | 120.60 (19) | N1—C4—H4A | 109.9 |
| C5—N2—H2A | 119.7 | C3—C4—H4A | 109.9 |
| N1—N2—H2A | 119.7 | N1—C4—H4B | 109.9 |
| O2—C5—N2 | 121.4 (2) | C3—C4—H4B | 109.9 |
| O2—C5—N3 | 124.1 (2) | H4A—C4—H4B | 108.3 |
| N2—C5—N3 | 114.4 (2) | O1—C2—C1 | 111.6 (2) |
| C9—C8—C7 | 119.6 (3) | O1—C2—H2B | 109.3 |
| C9—C8—H8A | 120.2 | C1—C2—H2B | 109.3 |
| C7—C8—H8A | 120.2 | O1—C2—H2C | 109.3 |
| C10—C11—C6 | 120.6 (2) | C1—C2—H2C | 109.3 |
| C10—C11—H11A | 119.7 | H2B—C2—H2C | 108.0 |
| C6—C11—H11A | 119.7 | N1—C1—C2 | 108.9 (2) |
| C8—C9—C10 | 120.9 (2) | N1—C1—H1A | 109.9 |
| C8—C9—Cl1 | 119.9 (2) | C2—C1—H1A | 109.9 |
| C10—C9—Cl1 | 119.1 (2) | N1—C1—H1B | 109.9 |
| C9—C10—C11 | 119.4 (2) | C2—C1—H1B | 109.9 |
| C9—C10—H10A | 120.3 | H1A—C1—H1B | 108.3 |
| C11—C10—H10A | 120.3 |
| H··· | ||||
| N2—H2 | 0.86 | 2.03 | 2.865 (3) | 162 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.03 | 2.865 (3) | 162 |
Symmetry code: (i) .