Literature DB >> 2259624

An analytical study of the dimerization of in vitro generated RNA of Moloney murine leukemia virus MoMuLV.

C Roy1, N Tounekti, M Mougel, J L Darlix, C Paoletti, C Ehresmann, B Ehresmann, J Paoletti.   

Abstract

The genome of Moloney murine leukemia virus(MoMuLV) is composed of two identical RNA molecules joined at their 5' ends by the dimer linkage structure (DLS). Recently it was shown that in vitro generated MuLV RNA formed dimeric molecules and that dimerization sequences are located within the Psi encapsidation domain between positions 215 and 420. Conditions for the spontaneous dimerization of a MuLV RNA fragment encompassing the Psi domain have been investigated. The rate of spontaneous MuLV RNA dimer formation is dependent upon RNA, NaCl and MgCl2 concentrations as well as temperature. Thermal denaturation of in vitro generated dimer RNA of 350 nt, from positions 215 to 565, gave a Tm of about 58 degrees C in 100 mM NaCl. This Tm value is very close to that found for RNA corresponding to the 5' 755 nt and to the genomic 70 S RNA isolated from virions. According to thrermodynamic parameters derived from denaturation curves of MuLV dimer RNA generated in vitro, the dimer linkage structure probably involves short sequences.

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Year:  1990        PMID: 2259624      PMCID: PMC332864          DOI: 10.1093/nar/18.24.7287

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

1.  Structure of 50 to 70S RNA from Moloney sarcoma viruses.

Authors:  J Maisel; W Bender; S Hu; P H Duesberg; N Davidson
Journal:  J Virol       Date:  1978-01       Impact factor: 5.103

2.  High-molecular-weight RNAs of AKR, NZB, and wild mouse viruses and avian reticuloendotheliosis virus all have similar dimer structures.

Authors:  W Bender; Y H Chien; S Chattopadhyay; P K Vogt; M B Gardner; N Davidson
Journal:  J Virol       Date:  1978-03       Impact factor: 5.103

3.  RD-114, baboon, and woolly monkey viral RNA's compared in size and structure.

Authors:  H J Kung; S Hu; W Bender; J M Bailey; N Davidson; M O Nicolson; R M McAllister
Journal:  Cell       Date:  1976-04       Impact factor: 41.582

4.  A study of the dimer formation of Rous sarcoma virus RNA and of its effect on viral protein synthesis in vitro.

Authors:  E Bieth; C Gabus; J L Darlix
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

5.  On the application of polyelectrolyte limiting laws to the helix-coil transition of DNA. V. Ionic effects on renaturation kinetics.

Authors:  G S Manning
Journal:  Biopolymers       Date:  1976-07       Impact factor: 2.505

Review 6.  The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides.

Authors:  G S Manning
Journal:  Q Rev Biophys       Date:  1978-05       Impact factor: 5.318

7.  Simplification of the empirical relationship between melting temperature of DNA, its GC content and concentration of sodium ions in solution.

Authors:  F Frank-Kamenetskii
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

8.  Determination of DNA base compositions from melting profiles in dilute buffers.

Authors:  R J Owen; L R Hill; S P Lapage
Journal:  Biopolymers       Date:  1969       Impact factor: 2.505

9.  Physical properties of ribosomal ribonucleic acid isolated from bacteria deficient in ribonuclease I.

Authors:  K A Cammack; D S Miller; K H Grinstead
Journal:  Biochem J       Date:  1970-05       Impact factor: 3.857

10.  Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules.

Authors:  W Bender; N Davidson
Journal:  Cell       Date:  1976-04       Impact factor: 41.582

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  28 in total

1.  Two distinct Moloney murine leukemia virus RNAs produced from a single locus dimerize at random.

Authors:  Jessica A Flynn; Alice Telesnitsky
Journal:  Virology       Date:  2005-10-10       Impact factor: 3.616

2.  Preliminary physical mapping of RNA-RNA linkages in the genomic RNA of Moloney murine leukemia virus.

Authors:  Catherine S Hibbert; Alan Rein
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

3.  The human immunodeficiency virus type 1 packaging signal and major splice donor region have a conserved stable secondary structure.

Authors:  G P Harrison; A M Lever
Journal:  J Virol       Date:  1992-07       Impact factor: 5.103

4.  Dimerization of human immunodeficiency virus (type 1) RNA: stimulation by cations and possible mechanism.

Authors:  R Marquet; F Baudin; C Gabus; J L Darlix; M Mougel; C Ehresmann; B Ehresmann
Journal:  Nucleic Acids Res       Date:  1991-05-11       Impact factor: 16.971

5.  Characterization of a natural heterodimer between MLV genomic RNA and the SD' retroelement generated by alternative splicing.

Authors:  Stéphan Maurel; Laurent Houzet; Eric L Garcia; Alice Telesnitsky; Marylène Mougel
Journal:  RNA       Date:  2007-10-10       Impact factor: 4.942

6.  The Cys-His motif of Ty3 NC can be contributed by Gag3 or Gag3-Pol3 polyproteins.

Authors:  K J Orlinsky; S B Sandmeyer
Journal:  J Virol       Date:  1994-07       Impact factor: 5.103

7.  Monitoring retroviral RNA dimerization in vivo via hammerhead ribozyme cleavage.

Authors:  B K Pal; L Scherer; L Zelby; E Bertrand; J J Rossi
Journal:  J Virol       Date:  1998-10       Impact factor: 5.103

8.  Characterization of human immunodeficiency virus type 1 dimeric RNA from wild-type and protease-defective virions.

Authors:  W Fu; R J Gorelick; A Rein
Journal:  J Virol       Date:  1994-08       Impact factor: 5.103

9.  Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro.

Authors:  E Skripkin; J C Paillart; R Marquet; B Ehresmann; C Ehresmann
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

10.  Analytical study of avian reticuloendotheliosis virus dimeric RNA generated in vivo and in vitro.

Authors:  J L Darlix; C Gabus; B Allain
Journal:  J Virol       Date:  1992-12       Impact factor: 5.103

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