Literature DB >> 22595008

Cations in charge: magnesium ions in RNA folding and catalysis.

Jessica C Bowman1, Timothy K Lenz, Nicholas V Hud, Loren Dean Williams.   

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Year:  2012        PMID： 22595008     DOI： 10.1016/j.sbi.2012.04.006

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


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  67 in total

1.  How do metal ions direct ribozyme folding?

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2.  Molecular modeling of nucleic acid structure: electrostatics and solvation.

Authors:  T E Cheatham; B R Brooks; P A Kollman
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2001-08

3.  Quantitative Studies of an RNA Duplex Electrostatics by Ion Counting.

Authors:  Magdalena Gebala; Daniel Herschlag
Journal:  Biophys J       Date:  2019-08-12       Impact factor: 4.033

4.  How Does Mg2+ Modulate the RNA Folding Mechanism: A Case Study of the G:C W:W Trans Basepair.

Authors:  Antarip Halder; Rohit Roy; Dhananjay Bhattacharyya; Abhijit Mitra
Journal:  Biophys J       Date:  2017-05-12       Impact factor: 4.033

5.  Decoding on the ribosome depends on the structure of the mRNA phosphodiester backbone.

Authors:  Hannah E Keedy; Erica N Thomas; Hani S Zaher
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-02       Impact factor: 11.205

6.  Rapid colorimetric assays to qualitatively distinguish RNA and DNA in biomolecular samples.

Authors:  Jennifer Patterson; Cameron Mura
Journal:  J Vis Exp       Date:  2013-02-04       Impact factor: 1.355

7.  Many-body effect in ion binding to RNA.

Authors:  Yuhong Zhu; Shi-Jie Chen
Journal:  J Chem Phys       Date:  2014-08-07       Impact factor: 3.488

8.  Physical Principles and Extant Biology Reveal Roles for RNA-Containing Membraneless Compartments in Origins of Life Chemistry.

Authors:  Raghav R Poudyal; Fatma Pir Cakmak; Christine D Keating; Philip C Bevilacqua
Journal:  Biochemistry       Date:  2018-03-21       Impact factor: 3.162

Review 9.  RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.

Authors:  Jiří Šponer; Giovanni Bussi; Miroslav Krepl; Pavel Banáš; Sandro Bottaro; Richard A Cunha; Alejandro Gil-Ley; Giovanni Pinamonti; Simón Poblete; Petr Jurečka; Nils G Walter; Michal Otyepka
Journal:  Chem Rev       Date:  2018-01-03       Impact factor: 60.622

10.  Exploring the electrostatic energy landscape for tetraloop-receptor docking.

Authors:  Zhaojian He; Yuhong Zhu; Shi-Jie Chen
Journal:  Phys Chem Chem Phys       Date:  2013-12-10       Impact factor: 3.676
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