Literature DB >> 22594521

Genomic in situ hybridization reveals both auto- and allopolyploid origins of different North and Central American hexaploid potato (Solanum sect. Petota) species.

Galina Pendinen1, David M Spooner, Jiming Jiang, Tatjana Gavrilenko.   

Abstract

Wild potato ( Solanum L. sect. Petota Dumort.) species contain diploids (2n = 2x = 24) to hexaploids (2n = 6x = 72). J.G. Hawkes classified all hexaploid Mexican species in series Demissa Bukasov and, according to a classic five-genome hypothesis of M. Matsubayashi in 1991, all members of series Demissa are allopolyploids. We investigated the genome composition of members of Hawkes's series Demissa with genomic in situ hybridization (GISH), using labeled DNA of their putative progenitors having diploid AA, BB, or PP genome species or with DNA of tetraploid species having AABB or AAA(a)A(a) genomes. GISH analyses support S. hougasii Correll as an allopolyploid with one AA component genome and another BB component genome. Our results also indicate that the third genome of S. hougasii is more closely related to P or a P genome-related species. Solanum demissum Lindl., in contrast, has all three chromosome sets related to the basic A genome, similar to the GISH results of polyploid species of series Acaulia Juz. Our results support a more recent taxonomic division of the Mexican hexaploid species into two groups: the allopolyploid Iopetala group containing S. hougasii, and an autopolyploid Acaulia group containing S. demissum with South American species S. acaule Bitter and S. albicans (Ochoa) Ochoa.

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Year:  2012        PMID: 22594521     DOI: 10.1139/g2012-027

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  7 in total

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Authors:  James A Shapiro
Journal:  Interface Focus       Date:  2017-08-18       Impact factor: 3.906

2.  A revision of the Old World Black Nightshades (Morelloid clade of Solanum L., Solanaceae).

Authors:  Tiina Särkinen; Peter Poczai; Gloria E Barboza; Gerard M van der Weerden; Maria Baden; Sandra Knapp
Journal:  PhytoKeys       Date:  2018-07-25       Impact factor: 1.635

3.  Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres.

Authors:  Haiqin Zhang; Andrea Koblížková; Kai Wang; Zhiyun Gong; Ludmila Oliveira; Giovana A Torres; Yufeng Wu; Wenli Zhang; Petr Novák; C Robin Buell; Jiří Macas; Jiming Jiang
Journal:  Plant Cell       Date:  2014-04-11       Impact factor: 11.277

4.  Chromosome painting in meiosis reveals pairing of specific chromosomes in polyploid Solanum species.

Authors:  Li He; Guilherme T Braz; Giovana A Torres; Jiming Jiang
Journal:  Chromosoma       Date:  2018-09-21       Impact factor: 4.316

5.  Complete chloroplast genome sequence of Solanum hjertingii, one of the wild potato relatives.

Authors:  Tae-Ho Park
Journal:  Mitochondrial DNA B Resour       Date:  2022-04-25       Impact factor: 0.610

Review 6.  Application of Genomic In Situ Hybridization in Horticultural Science.

Authors:  Fahad Ramzan; Adnan Younis; Ki-Byung Lim
Journal:  Int J Genomics       Date:  2017-03-28       Impact factor: 2.326

7.  Complete chloroplast genome sequence of the wild diploid potato relative, Solanum acaule.

Authors:  Tae-Ho Park
Journal:  Mitochondrial DNA B Resour       Date:  2021-03-26       Impact factor: 0.658

  7 in total

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