Literature DB >> 22594497

The importance of examining the proportion of circulating DNA originating from tumor, microenvironment and normal cells in colorectal cancer patients.

Florent Mouliere1, Alain R Thierry.   

Abstract

INTRODUCTION: The pressing need to determine the KRAS/BRAF mutational status for selecting patients with colorectal cancer (CRC) for anti-EGFR therapy provides a great opportunity to use circulating DNA (ctDNA) as a theranostic tool for personalized medicine. Better understanding of ctDNA origin (necrosis, apoptosis and active release) may increase the reliability of using abnormal ctDNA as biomarker. AREAS COVERED: The authors showed that examining the proportion of ctDNA originating from tumor, microenvironment and normal cells, through size distribution and mutation load may help to discriminate mechanisms of ctDNA release. EXPERT OPINION: Contrary to the literature, it was observed that tumor-derived ctDNA was mostly shorter than 100 bp. Tumor-derived ctDNA from cancer patients exhibited a specific ctDNA size distribution profile and significantly higher ctDNA fragmentation than ctDNA from healthy individuals. Examination of the KRAS and BRAF mutational load in 48 mutated samples revealed very high variation ranging from 0.037 to 68.8%. This suggests either that tumor cells variably release ctDNA compared with tumor-associated stroma cells or normal cells, or that mutant ctDNA analysis may depend on tumor clonality. Detection of point mutation by quantifying the proportion of mutant ctDNA fragments provides a powerful tool for assessing the proportion of ctDNA from different origins.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22594497     DOI: 10.1517/14712598.2012.688023

Source DB:  PubMed          Journal:  Expert Opin Biol Ther        ISSN: 1471-2598            Impact factor:   4.388


  29 in total

1.  Clinical validation of the detection of KRAS and BRAF mutations from circulating tumor DNA.

Authors:  Alain R Thierry; Florent Mouliere; Safia El Messaoudi; Caroline Mollevi; Evelyne Lopez-Crapez; Fanny Rolet; Brigitte Gillet; Celine Gongora; Pierre Dechelotte; Bruno Robert; Maguy Del Rio; Pierre-Jean Lamy; Frederic Bibeau; Michelle Nouaille; Virginie Loriot; Anne-Sophie Jarrousse; Franck Molina; Muriel Mathonnet; Denis Pezet; Marc Ychou
Journal:  Nat Med       Date:  2014-03-23       Impact factor: 53.440

Review 2.  Circulating cell-free nucleic acids: characteristics and applications.

Authors:  Ondrej Pös; Orsolya Biró; Tomas Szemes; Bálint Nagy
Journal:  Eur J Hum Genet       Date:  2018-04-23       Impact factor: 4.246

3.  Identification of double-stranded genomic DNA spanning all chromosomes with mutated KRAS and p53 DNA in the serum exosomes of patients with pancreatic cancer.

Authors:  Christoph Kahlert; Sonia A Melo; Alexei Protopopov; Jiabin Tang; Sahil Seth; Moritz Koch; Jianhua Zhang; Juergen Weitz; Lynda Chin; Andrew Futreal; Raghu Kalluri
Journal:  J Biol Chem       Date:  2014-01-07       Impact factor: 5.157

4.  Controversies in the Interpretation of Liquid Biopsy Data in Lymphoma.

Authors:  Maria Cristina Pirosa; Sven Borchmann; Fabrice Jardin; Gianluca Gaidano; Davide Rossi
Journal:  Hemasphere       Date:  2022-05-13

Review 5.  The Influence of Proteins on Fate and Biological Role of Circulating DNA.

Authors:  Oleg Tutanov; Svetlana Tamkovich
Journal:  Int J Mol Sci       Date:  2022-06-29       Impact factor: 6.208

6.  Multi-marker analysis of circulating cell-free DNA toward personalized medicine for colorectal cancer.

Authors:  Florent Mouliere; Safia El Messaoudi; Dalong Pang; Anatoly Dritschilo; Alain R Thierry
Journal:  Mol Oncol       Date:  2014-03-24       Impact factor: 6.603

Review 7.  Methylated circulating tumor DNA as a biomarker for colorectal cancer diagnosis, prognosis, and prediction.

Authors:  Farah J Nassar; Zahraa S Msheik; Rihab R Nasr; Sally N Temraz
Journal:  Clin Epigenetics       Date:  2021-05-17       Impact factor: 6.551

Review 8.  DNA studies using atomic force microscopy: capabilities for measurement of short DNA fragments.

Authors:  Dalong Pang; Alain R Thierry; Anatoly Dritschilo
Journal:  Front Mol Biosci       Date:  2015-01-29

9.  The receptor for advanced glycation end products (RAGE) enhances autophagy and neutrophil extracellular traps in pancreatic cancer.

Authors:  B A Boone; L Orlichenko; N E Schapiro; P Loughran; G C Gianfrate; J T Ellis; A D Singhi; R Kang; D Tang; M T Lotze; H J Zeh
Journal:  Cancer Gene Ther       Date:  2015-04-24       Impact factor: 5.987

10.  Characterization of Plasma Cell-Free DNA Integrity Using Droplet-Based Digital PCR: Toward the Development of Circulating Tumor DNA-Dedicated Assays.

Authors:  Geoffroy Poulet; Fanny Garlan; Sonia Garrigou; Eleonora Zonta; Leonor Benhaim; Marie-Jennifer Carrillon; Audrey Didelot; Delphine Le Corre; Claire Mulot; Philippe Nizard; Frederic Ginot; Audrey Boutonnet-Rodat; Helene Blons; Jean-Baptiste Bachet; Julien Taïeb; Aziz Zaanan; Vanna Geromel; Laurence Pellegrina; Pierre Laurent-Puig; Shu-Fang Wang-Renault; Valerie Taly
Journal:  Front Oncol       Date:  2021-05-06       Impact factor: 6.244

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.