| Literature DB >> 22590426 |
Steffen Thies, Christian Näther, Rainer Herges.
Abstract
The asymmetric unit of the title compound, C(12)H(12)N(4)O(2), consists of one half-mol-ecule, which is located on a center of inversion. The molecule has a step-like shape; the azo group adopting a trans configuration, with the pyridine rings being parallel-displace.Entities:
Year: 2012 PMID: 22590426 PMCID: PMC3344664 DOI: 10.1107/S1600536812018326
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H12N4O2 | |
| Mo | |
| Orthorhombic, | Cell parameters from 4972 reflections |
| θ = 4.7–28.8° | |
| µ = 0.10 mm−1 | |
| Block, colourless | |
| 0.3 × 0.2 × 0.2 mm | |
| Stoe IPDS-1 diffractometer | 1002 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 27.1°, θmin = 3.0° |
| Phi scans | |
| 5829 measured reflections | |
| 1235 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1235 reflections | Δρmax = 0.26 e Å−3 |
| 84 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.030 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.66974 (9) | 0.6358 (2) | 0.34371 (9) | 0.0314 (3) | |
| C1 | 0.62249 (10) | 0.7907 (2) | 0.39360 (9) | 0.0263 (3) | |
| H1 | 0.6591 | 0.9134 | 0.4119 | 0.032* | |
| C2 | 0.52211 (9) | 0.7811 (2) | 0.42010 (8) | 0.0211 (3) | |
| C3 | 0.46546 (10) | 0.60269 (19) | 0.38987 (8) | 0.0205 (3) | |
| C4 | 0.51423 (10) | 0.4414 (2) | 0.33786 (9) | 0.0250 (3) | |
| H4 | 0.4794 | 0.3190 | 0.3161 | 0.030* | |
| C5 | 0.61506 (11) | 0.4644 (2) | 0.31870 (10) | 0.0301 (3) | |
| H5 | 0.6475 | 0.3513 | 0.2857 | 0.036* | |
| N2 | 0.47208 (8) | 0.94965 (17) | 0.47068 (7) | 0.0228 (3) | |
| O1 | 0.36924 (7) | 0.60036 (15) | 0.41627 (7) | 0.0277 (3) | |
| C6 | 0.30947 (11) | 0.4230 (2) | 0.38338 (11) | 0.0321 (4) | |
| H6A | 0.3032 | 0.4284 | 0.3124 | 0.048* | |
| H6B | 0.2438 | 0.4320 | 0.4130 | 0.048* | |
| H6C | 0.3410 | 0.2888 | 0.4024 | 0.048* |
| N1 | 0.0230 (6) | 0.0348 (6) | 0.0364 (7) | −0.0008 (5) | 0.0067 (5) | −0.0042 (5) |
| C1 | 0.0237 (7) | 0.0271 (7) | 0.0280 (6) | −0.0044 (5) | 0.0010 (5) | −0.0020 (5) |
| C2 | 0.0227 (6) | 0.0202 (6) | 0.0203 (5) | 0.0000 (5) | −0.0014 (4) | −0.0006 (4) |
| C3 | 0.0200 (6) | 0.0208 (6) | 0.0205 (6) | 0.0011 (5) | −0.0014 (4) | 0.0011 (4) |
| C4 | 0.0273 (7) | 0.0216 (6) | 0.0261 (6) | −0.0009 (5) | −0.0004 (5) | −0.0045 (5) |
| C5 | 0.0292 (7) | 0.0283 (7) | 0.0329 (7) | 0.0039 (6) | 0.0052 (5) | −0.0058 (5) |
| N2 | 0.0231 (5) | 0.0202 (5) | 0.0251 (5) | −0.0017 (4) | −0.0012 (4) | −0.0022 (4) |
| O1 | 0.0193 (5) | 0.0241 (5) | 0.0396 (6) | −0.0030 (4) | 0.0020 (4) | −0.0086 (4) |
| C6 | 0.0230 (7) | 0.0288 (7) | 0.0444 (8) | −0.0068 (6) | −0.0037 (6) | −0.0068 (6) |
| N1—C5 | 1.3360 (19) | C4—C5 | 1.3832 (19) |
| N1—C1 | 1.3369 (18) | C4—H4 | 0.9400 |
| C1—C2 | 1.3936 (18) | C5—H5 | 0.9400 |
| C1—H1 | 0.9400 | N2—N2i | 1.260 (2) |
| C2—C3 | 1.4044 (17) | O1—C6 | 1.4333 (16) |
| C2—N2 | 1.4209 (16) | C6—H6A | 0.9700 |
| C3—O1 | 1.3384 (16) | C6—H6B | 0.9700 |
| C3—C4 | 1.3897 (17) | C6—H6C | 0.9700 |
| C5—N1—C1 | 116.29 (12) | C3—C4—H4 | 120.6 |
| N1—C1—C2 | 123.89 (12) | N1—C5—C4 | 124.74 (13) |
| N1—C1—H1 | 118.1 | N1—C5—H5 | 117.6 |
| C2—C1—H1 | 118.1 | C4—C5—H5 | 117.6 |
| C1—C2—C3 | 118.65 (11) | N2i—N2—C2 | 113.10 (14) |
| C1—C2—N2 | 123.30 (11) | C3—O1—C6 | 117.56 (10) |
| C3—C2—N2 | 117.91 (11) | O1—C6—H6A | 109.5 |
| O1—C3—C4 | 125.58 (11) | O1—C6—H6B | 109.5 |
| O1—C3—C2 | 116.77 (11) | H6A—C6—H6B | 109.5 |
| C4—C3—C2 | 117.62 (12) | O1—C6—H6C | 109.5 |
| C5—C4—C3 | 118.73 (12) | H6A—C6—H6C | 109.5 |
| C5—C4—H4 | 120.6 | H6B—C6—H6C | 109.5 |