Literature DB >> 22590405

4'-tert-Butyl-5-chloro-3H-spiro-[1,3-benzothia-zole-2,1'-cyclo-hexa-ne].

Mehmet Akkurt, Gökçe Cihan-Üstündağ, Gültaze Capan, Yılmaz Dağdemir, Muhammad Nawaz Tahir.   

Abstract

In the title compound, C(16)H(22)ClNS, the nine-membered 2,3-dihydro-1,3-benzothia-zole ring system is essentially planar, with a maximum deviation of 0.025 (2) Å for the N atom. Its plane is almost perpendicular to the main plane of the substituted cyclo-hexane ring, which adopts a chair conformation. In the crystal, the molecules are linked by C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 22590405      PMCID: PMC3344643          DOI: 10.1107/S1600536812017539

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzothia­zole derivatives, see: Coudert et al. (1988 ▶); Karalı et al. (2010 ▶); Palmer et al. (1971 ▶). For the crystal structures of similar compounds, see, for example: Akkurt et al. (2010 ▶); Aryai et al. (1976 ▶); Karalı et al. (2010 ▶). For standard values of bond lengths, see: Allen et al. (1987 ▶). For details of ring-puckering analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C16H22ClNS M = 295.87 Monoclinic, a = 15.2810 (18) Å b = 8.9830 (8) Å c = 11.8750 (13) Å β = 109.580 (3)° V = 1535.8 (3) Å3 Z = 4 Mo Kα radiation μ = 0.37 mm−1 T = 296 K 0.27 × 0.20 × 0.18 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.915, T max = 0.935 14074 measured reflections 3849 independent reflections 2330 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.128 S = 1.02 3849 reflections 179 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812017539/su2411sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017539/su2411Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812017539/su2411Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H22ClNSF(000) = 632
Mr = 295.87Dx = 1.280 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 776 reflections
a = 15.2810 (18) Åθ = 3.3–19.5°
b = 8.9830 (8) ŵ = 0.37 mm1
c = 11.8750 (13) ÅT = 296 K
β = 109.580 (3)°Prism, colourless
V = 1535.8 (3) Å30.27 × 0.20 × 0.18 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3849 independent reflections
Radiation source: fine-focus sealed tube2330 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
ω scansθmax = 28.5°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −20→20
Tmin = 0.915, Tmax = 0.935k = −11→10
14074 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0473P)2 + 0.2285P] where P = (Fo2 + 2Fc2)/3
3849 reflections(Δ/σ)max < 0.001
179 parametersΔρmax = 0.25 e Å3
1 restraintΔρmin = −0.24 e Å3
Experimental. Spectroscopic data for the title compound: IR (KBr) ν = 3370 (N—H), 2962, 2912, 2862 (C—H), 1585, 1571, 1473, 1442 (C=C) cm-1; 1H-NMR (DMSO-d6, 500 MHz) d= 0.83–0.86 (9H, m, 4'-C(CH3)3-cyc.), 0.95–1.02 (1H, m, CH/CH2-cyc.), 1.09–1.36 (2H, m, CH/CH2-cyc.), 1.58–1.72 (4H, m, CH/CH2-cyc.), 2.15–2.22 (2H, m, CH/CH2-cyc.), 6.40, 6.47 (1H, 2 d, J=2.0 Hz, H4-bt.), 6.50 (1H, dd, J=8.1, 2.0 Hz, H6-bt.), 6.90 (1H, d, J=7.8 Hz, H7-bt.), 6.73, 6.97 (1H, 2 s, NH) p.p.m. (cyc.=cyclohexane, bt.=benzothiazole).
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.35486 (5)0.80459 (8)0.13722 (7)0.0761 (3)
S10.02827 (4)0.69814 (6)0.07426 (5)0.0503 (2)
N1−0.00626 (14)0.8895 (2)0.2213 (2)0.0628 (8)
C1−0.08493 (14)0.7159 (2)0.07911 (17)0.0369 (7)
C2−0.16334 (16)0.6409 (2)0.0125 (2)0.0474 (8)
C3−0.24750 (16)0.6684 (2)0.0286 (2)0.0515 (8)
C4−0.25028 (16)0.7710 (2)0.1132 (2)0.0469 (8)
C5−0.17272 (16)0.8482 (2)0.1807 (2)0.0447 (7)
C6−0.08920 (15)0.8210 (2)0.16337 (18)0.0390 (7)
C70.07535 (15)0.8422 (2)0.1936 (2)0.0442 (7)
C80.11774 (16)0.9705 (2)0.1463 (2)0.0519 (8)
C90.20566 (15)0.9285 (2)0.1218 (2)0.0500 (8)
C100.27931 (14)0.8647 (2)0.23261 (18)0.0408 (7)
C110.23620 (15)0.7316 (2)0.27578 (19)0.0438 (7)
C120.14820 (15)0.7730 (2)0.30136 (19)0.0467 (8)
C130.37389 (16)0.8291 (2)0.2176 (2)0.0509 (8)
C140.4048 (2)0.9596 (3)0.1572 (3)0.0845 (14)
C150.44715 (18)0.8047 (3)0.3408 (2)0.0800 (11)
C160.36933 (18)0.6896 (3)0.1415 (2)0.0651 (10)
H1N−0.0005 (17)0.955 (2)0.2742 (16)0.070 (8)*
H2−0.160000.57120−0.043800.0570*
H3−0.301000.61850−0.016900.0620*
H5−0.176500.917500.237000.0540*
H8A0.072401.007000.073000.0620*
H8B0.131601.051000.204100.0620*
H9A0.230401.016000.095200.0600*
H9B0.190900.855500.058100.0600*
H100.291300.941000.295000.0490*
H11A0.221800.654300.215300.0520*
H11B0.281200.691600.347900.0520*
H12A0.122600.684500.325200.0560*
H12B0.163600.842900.367400.0560*
H14A0.467500.943600.159500.1270*
H14B0.401601.050200.198500.1270*
H14C0.364700.966900.075500.1270*
H15A0.506600.787900.332000.1200*
H15B0.430400.719700.378200.1200*
H15C0.450400.891200.389600.1200*
H16A0.319300.699300.067000.0980*
H16B0.359000.603700.183500.0980*
H16C0.426800.678400.126200.0980*
U11U22U33U12U13U23
Cl10.0543 (4)0.0816 (5)0.1046 (6)0.0027 (3)0.0428 (4)−0.0018 (4)
S10.0456 (3)0.0510 (4)0.0568 (4)−0.0017 (3)0.0203 (3)−0.0182 (3)
N10.0467 (12)0.0636 (14)0.0770 (15)−0.0030 (10)0.0191 (11)−0.0390 (12)
C10.0441 (12)0.0319 (11)0.0363 (11)0.0025 (9)0.0158 (9)0.0017 (8)
C20.0533 (14)0.0404 (12)0.0483 (13)−0.0035 (10)0.0168 (11)−0.0086 (10)
C30.0460 (14)0.0488 (14)0.0571 (15)−0.0096 (11)0.0139 (12)−0.0054 (11)
C40.0438 (13)0.0414 (12)0.0586 (15)0.0046 (10)0.0214 (11)0.0072 (10)
C50.0531 (14)0.0361 (11)0.0492 (13)0.0061 (10)0.0229 (11)−0.0011 (9)
C60.0455 (13)0.0295 (10)0.0412 (12)0.0022 (9)0.0133 (10)−0.0016 (9)
C70.0402 (13)0.0395 (12)0.0517 (13)−0.0018 (9)0.0139 (11)−0.0117 (10)
C80.0483 (14)0.0382 (12)0.0580 (15)0.0040 (10)0.0030 (11)0.0069 (10)
C90.0518 (14)0.0434 (12)0.0515 (14)−0.0031 (10)0.0131 (11)0.0118 (10)
C100.0424 (12)0.0352 (11)0.0411 (12)−0.0016 (9)0.0091 (10)−0.0016 (9)
C110.0465 (13)0.0404 (12)0.0400 (12)0.0039 (10)0.0087 (10)0.0094 (9)
C120.0554 (15)0.0414 (12)0.0440 (13)−0.0032 (10)0.0176 (11)−0.0010 (9)
C130.0451 (14)0.0488 (13)0.0572 (15)0.0010 (10)0.0151 (11)−0.0043 (11)
C140.070 (2)0.0732 (19)0.126 (3)−0.0153 (15)0.0536 (19)0.0001 (18)
C150.0468 (16)0.105 (2)0.077 (2)0.0111 (15)0.0061 (15)−0.0186 (16)
C160.0638 (17)0.0669 (16)0.0687 (17)0.0053 (13)0.0278 (14)−0.0127 (13)
Cl1—C41.741 (3)C2—H20.9300
S1—C11.757 (2)C3—H30.9300
S1—C71.875 (2)C5—H50.9300
N1—C61.369 (3)C8—H8A0.9700
N1—C71.456 (3)C8—H8B0.9700
N1—H1N0.844 (18)C9—H9A0.9700
C1—C21.371 (3)C9—H9B0.9700
C1—C61.393 (3)C10—H100.9800
C2—C31.384 (4)C11—H11A0.9700
C3—C41.375 (3)C11—H11B0.9700
C4—C51.375 (3)C12—H12A0.9700
C5—C61.381 (3)C12—H12B0.9700
C7—C121.519 (3)C14—H14A0.9600
C7—C81.519 (3)C14—H14B0.9600
C8—C91.515 (3)C14—H14C0.9600
C9—C101.528 (3)C15—H15A0.9600
C10—C131.548 (3)C15—H15B0.9600
C10—C111.534 (3)C15—H15C0.9600
C11—C121.521 (3)C16—H16A0.9600
C13—C151.531 (3)C16—H16B0.9600
C13—C161.533 (3)C16—H16C0.9600
C13—C141.529 (4)
C1—S1—C792.59 (10)C7—C8—H8A109.00
C6—N1—C7118.31 (19)C7—C8—H8B109.00
C6—N1—H1N122.4 (18)C9—C8—H8A109.00
C7—N1—H1N119.2 (18)C9—C8—H8B109.00
C2—C1—C6120.3 (2)H8A—C8—H8B108.00
S1—C1—C6111.63 (16)C8—C9—H9A109.00
S1—C1—C2128.03 (16)C8—C9—H9B109.00
C1—C2—C3120.35 (19)C10—C9—H9A109.00
C2—C3—C4118.6 (2)C10—C9—H9B109.00
Cl1—C4—C3119.39 (19)H9A—C9—H9B108.00
Cl1—C4—C5118.43 (17)C9—C10—H10107.00
C3—C4—C5122.2 (2)C11—C10—H10107.00
C4—C5—C6118.9 (2)C13—C10—H10107.00
C1—C6—C5119.7 (2)C10—C11—H11A109.00
N1—C6—C1114.0 (2)C10—C11—H11B109.00
N1—C6—C5126.29 (19)C12—C11—H11A109.00
S1—C7—N1103.38 (15)C12—C11—H11B109.00
N1—C7—C8111.46 (17)H11A—C11—H11B108.00
S1—C7—C8110.32 (15)C7—C12—H12A109.00
S1—C7—C12109.96 (13)C7—C12—H12B109.00
C8—C7—C12109.82 (19)C11—C12—H12A109.00
N1—C7—C12111.75 (19)C11—C12—H12B109.00
C7—C8—C9113.43 (16)H12A—C12—H12B108.00
C8—C9—C10111.89 (18)C13—C14—H14A110.00
C9—C10—C11107.78 (18)C13—C14—H14B109.00
C9—C10—C13115.16 (18)C13—C14—H14C109.00
C11—C10—C13113.56 (16)H14A—C14—H14B109.00
C10—C11—C12112.56 (16)H14A—C14—H14C109.00
C7—C12—C11112.28 (18)H14B—C14—H14C109.00
C10—C13—C15109.36 (19)C13—C15—H15A110.00
C10—C13—C16112.15 (19)C13—C15—H15B109.00
C14—C13—C16108.1 (2)C13—C15—H15C110.00
C15—C13—C16108.70 (18)H15A—C15—H15B110.00
C14—C13—C15108.4 (2)H15A—C15—H15C109.00
C10—C13—C14110.04 (18)H15B—C15—H15C109.00
C1—C2—H2120.00C13—C16—H16A110.00
C3—C2—H2120.00C13—C16—H16B109.00
C2—C3—H3121.00C13—C16—H16C109.00
C4—C3—H3121.00H16A—C16—H16B109.00
C4—C5—H5121.00H16A—C16—H16C109.00
C6—C5—H5121.00H16B—C16—H16C110.00
C7—S1—C1—C2180.00 (19)C4—C5—C6—N1178.9 (2)
C7—S1—C1—C6−0.14 (15)C4—C5—C6—C1−0.5 (3)
C1—S1—C7—N1−1.11 (14)S1—C7—C8—C9−68.5 (2)
C1—S1—C7—C8−120.40 (16)N1—C7—C8—C9177.21 (19)
C1—S1—C7—C12118.33 (16)C12—C7—C8—C952.8 (2)
C6—N1—C7—S12.3 (2)S1—C7—C12—C1169.25 (19)
C6—N1—C7—C8120.8 (2)N1—C7—C12—C11−176.55 (16)
C6—N1—C7—C12−115.9 (2)C8—C7—C12—C11−52.3 (2)
C7—N1—C6—C1−2.6 (3)C7—C8—C9—C10−56.6 (2)
C7—N1—C6—C5178.01 (19)C8—C9—C10—C1156.2 (2)
S1—C1—C2—C3179.60 (16)C8—C9—C10—C13−175.93 (15)
C6—C1—C2—C3−0.3 (3)C9—C10—C11—C12−56.7 (2)
S1—C1—C6—N11.5 (2)C13—C10—C11—C12174.45 (17)
S1—C1—C6—C5−179.09 (15)C9—C10—C13—C1446.7 (2)
C2—C1—C6—N1−178.61 (18)C9—C10—C13—C15165.71 (17)
C2—C1—C6—C50.8 (3)C9—C10—C13—C16−73.6 (2)
C1—C2—C3—C4−0.6 (3)C11—C10—C13—C14171.7 (2)
C2—C3—C4—C50.9 (3)C11—C10—C13—C15−69.4 (2)
C2—C3—C4—Cl1−178.66 (16)C11—C10—C13—C1651.3 (2)
Cl1—C4—C5—C6179.20 (15)C10—C11—C12—C756.6 (2)
C3—C4—C5—C6−0.4 (3)
D—H···AD—HH···AD···AD—H···A
C8—H8B···Cg1i0.972.843.796 (2)169
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8BCg1i0.972.843.796 (2)169

Symmetry code: (i) .

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3.  Benzothiazolines as antituberculous agents.

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5.  5-Chloro-benzothia-zole-2-spiro-3'-indolin-2'-one.

Authors:  Mehmet Akkurt; Selvi Karaca; Görkem Ermut; Nilgün Karalı; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-20

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
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