Literature DB >> 22590401

Methyl 5-hy-droxy-3-phenyl-1,2-oxazolidine-5-carboxyl-ate.

Jia Ye1, Ya-Nan Liu, Yu Cheng.   

Abstract

In the title compound, C(11)H(13)NO(4), the isoxazolidine ring has an envelope conformation with the O atom as the flap. In the crystal, mol-ecules are liked via N-H⋯O and bifurcated O-H⋯(O,N) hydrogen bonds forming chains propagating along [010]. There are also C-H⋯O inter-actions present.

Entities:  

Year:  2012        PMID: 22590401      PMCID: PMC3344639          DOI: 10.1107/S1600536812017576

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of isoxazolidine-containing compounds as building blocks in synthesis, see: Carrillo et al. (2006 ▶); Lv et al. (2010 ▶); Ibrahem et al. (2007 ▶); Sharma et al. (1999 ▶). For information on conjugation additions to α,β-unsaturated ketones, see: Wu et al. (2006 ▶). For standard bond-lengths see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H13NO4 M = 223.22 Monoclinic, a = 11.8322 (3) Å b = 6.0853 (1) Å c = 15.8570 (3) Å β = 101.864 (2)° V = 1117.35 (4) Å3 Z = 4 Cu Kα radiation μ = 0.85 mm−1 T = 291 K 0.40 × 0.36 × 0.30 mm

Data collection

Oxford Gemini S Ultra diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.726, T max = 0.784 10901 measured reflections 2165 independent reflections 1921 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.097 S = 1.05 2165 reflections 151 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.12 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812017576/su2406sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017576/su2406Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812017576/su2406Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13NO4F(000) = 472
Mr = 223.22Dx = 1.327 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 7888 reflections
a = 11.8322 (3) Åθ = 3.8–71.9°
b = 6.0853 (1) ŵ = 0.85 mm1
c = 15.8570 (3) ÅT = 291 K
β = 101.864 (2)°Block, colourless
V = 1117.35 (4) Å30.40 × 0.36 × 0.30 mm
Z = 4
Oxford Gemini S Ultra diffractometer2165 independent reflections
Radiation source: Enhance Ultra (Cu) X-ray Source1921 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.034
Detector resolution: 15.9149 pixels mm-1θmax = 72.1°, θmin = 5.7°
ω scansh = −14→13
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −6→7
Tmin = 0.726, Tmax = 0.784l = −19→18
10901 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.097H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0323P)2 + 0.2933P] where P = (Fo2 + 2Fc2)/3
2165 reflections(Δ/σ)max < 0.001
151 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.12 e Å3
Experimental. Absorption correction: (CrysAlisPro; Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.79693 (8)0.06822 (15)0.78232 (6)0.0518 (3)
O20.82481 (9)−0.20986 (16)0.88556 (6)0.0604 (4)
O31.04065 (10)−0.0305 (2)0.89858 (10)0.0901 (5)
O40.96722 (8)0.30583 (16)0.89779 (7)0.0641 (4)
N10.67179 (10)0.0582 (2)0.76513 (8)0.0535 (4)
C10.3265 (2)−0.1664 (6)0.87113 (15)0.1076 (12)
C20.4303 (2)−0.2651 (4)0.90278 (16)0.1061 (10)
C30.53265 (17)−0.1617 (3)0.89530 (14)0.0857 (7)
C40.53083 (13)0.0405 (3)0.85666 (10)0.0629 (5)
C50.42474 (15)0.1361 (4)0.82446 (13)0.0843 (7)
C60.32309 (17)0.0312 (5)0.83205 (16)0.1066 (10)
C70.63963 (12)0.1531 (2)0.84333 (10)0.0577 (5)
C80.74876 (13)0.1335 (3)0.91548 (10)0.0613 (5)
C90.83371 (12)0.0138 (2)0.87205 (9)0.0522 (4)
C100.96003 (12)0.0898 (2)0.89183 (9)0.0553 (5)
C111.08082 (14)0.4029 (3)0.90958 (12)0.0719 (6)
H10.25820−0.235400.876500.1290*
H20.43250−0.401700.929400.1270*
H30.60300−0.230200.916700.1030*
H40.6564 (13)−0.088 (3)0.7630 (10)0.062 (4)*
H50.421400.272200.797400.1010*
H60.252300.097500.810100.1280*
H70.622600.309500.832700.0690*
H8A0.777800.277400.935600.0740*
H8B0.733100.049900.963900.0740*
H90.84150−0.277400.845100.0900*
H11A1.075200.558700.917300.1080*
H11B1.112800.374400.859700.1080*
H11C1.129900.340200.959500.1080*
U11U22U33U12U13U23
O10.0502 (5)0.0495 (6)0.0538 (5)−0.0012 (4)0.0064 (4)0.0012 (4)
O20.0731 (7)0.0478 (6)0.0577 (6)−0.0060 (5)0.0076 (5)0.0027 (4)
O30.0607 (7)0.0555 (7)0.1493 (12)0.0081 (6)0.0105 (7)−0.0051 (7)
O40.0539 (6)0.0465 (6)0.0867 (8)−0.0031 (4)0.0023 (5)0.0018 (5)
N10.0496 (6)0.0472 (7)0.0608 (7)−0.0018 (5)0.0049 (5)−0.0032 (5)
C10.0765 (14)0.163 (3)0.0888 (15)−0.0423 (16)0.0295 (11)−0.0271 (16)
C20.1073 (18)0.1077 (18)0.1067 (16)−0.0414 (14)0.0303 (13)0.0013 (13)
C30.0734 (11)0.0809 (13)0.1028 (14)−0.0142 (10)0.0179 (10)0.0070 (11)
C40.0565 (8)0.0657 (10)0.0669 (9)−0.0030 (7)0.0136 (7)−0.0112 (8)
C50.0627 (10)0.0975 (14)0.0922 (13)0.0080 (10)0.0149 (9)−0.0081 (11)
C60.0572 (11)0.153 (2)0.1111 (18)−0.0031 (13)0.0211 (11)−0.0198 (17)
C70.0593 (8)0.0481 (8)0.0653 (9)0.0006 (6)0.0120 (7)−0.0059 (6)
C80.0593 (8)0.0635 (9)0.0605 (8)−0.0063 (7)0.0110 (7)−0.0115 (7)
C90.0564 (8)0.0463 (7)0.0511 (7)−0.0023 (6)0.0046 (6)−0.0007 (6)
C100.0566 (8)0.0474 (8)0.0588 (8)0.0015 (6)0.0044 (6)0.0008 (6)
C110.0593 (9)0.0615 (10)0.0893 (12)−0.0118 (8)0.0026 (8)0.0030 (8)
O1—N11.4507 (16)C5—C61.389 (3)
O1—C91.4384 (17)C7—C81.544 (2)
O2—C91.3852 (16)C8—C91.517 (2)
O3—C101.1897 (18)C9—C101.534 (2)
O4—C101.3195 (16)C1—H10.9300
O4—C111.445 (2)C2—H20.9300
O2—H90.8200C3—H30.9300
N1—C71.4866 (19)C5—H50.9300
N1—H40.907 (18)C6—H60.9300
C1—C21.367 (4)C7—H70.9800
C1—C61.350 (5)C8—H8A0.9700
C2—C31.391 (3)C8—H8B0.9700
C3—C41.373 (3)C11—H11A0.9600
C4—C71.511 (2)C11—H11B0.9600
C4—C51.383 (3)C11—H11C0.9600
N1—O1—C9105.41 (10)O4—C10—C9111.15 (11)
C10—O4—C11117.46 (12)C2—C1—H1120.00
C9—O2—H9109.00C6—C1—H1120.00
O1—N1—C7104.68 (10)C1—C2—H2120.00
C7—N1—H4109.2 (10)C3—C2—H2120.00
O1—N1—H4103.7 (10)C2—C3—H3120.00
C2—C1—C6120.0 (2)C4—C3—H3120.00
C1—C2—C3120.2 (2)C4—C5—H5120.00
C2—C3—C4120.62 (19)C6—C5—H5120.00
C3—C4—C5118.15 (17)C1—C6—H6120.00
C3—C4—C7122.23 (15)C5—C6—H6120.00
C5—C4—C7119.50 (16)N1—C7—H7108.00
C4—C5—C6120.8 (2)C4—C7—H7108.00
C1—C6—C5120.3 (2)C8—C7—H7108.00
C4—C7—C8117.92 (13)C7—C8—H8A111.00
N1—C7—C8105.64 (11)C7—C8—H8B111.00
N1—C7—C4108.18 (12)C9—C8—H8A111.00
C7—C8—C9103.42 (12)C9—C8—H8B111.00
O1—C9—O2111.23 (10)H8A—C8—H8B109.00
O1—C9—C8104.16 (11)O4—C11—H11A109.00
C8—C9—C10118.11 (12)O4—C11—H11B109.00
O1—C9—C10102.52 (11)O4—C11—H11C109.00
O2—C9—C8108.85 (12)H11A—C11—H11B109.00
O2—C9—C10111.50 (11)H11A—C11—H11C109.00
O3—C10—O4124.61 (14)H11B—C11—H11C109.00
O3—C10—C9124.22 (12)
C9—O1—N1—C738.90 (12)C3—C4—C7—C8−38.7 (2)
N1—O1—C9—O276.12 (13)C5—C4—C7—N1−94.88 (18)
N1—O1—C9—C8−40.98 (12)C5—C4—C7—C8145.43 (16)
N1—O1—C9—C10−164.61 (9)C4—C5—C6—C10.0 (4)
C11—O4—C10—O32.8 (2)N1—C7—C8—C9−3.24 (15)
C11—O4—C10—C9−175.29 (12)C4—C7—C8—C9117.76 (14)
O1—N1—C7—C4−148.04 (11)C7—C8—C9—O126.43 (14)
O1—N1—C7—C8−20.90 (13)C7—C8—C9—O2−92.30 (13)
C6—C1—C2—C30.4 (4)C7—C8—C9—C10139.28 (12)
C2—C1—C6—C5−0.6 (4)O1—C9—C10—O3−103.08 (16)
C1—C2—C3—C40.4 (3)O1—C9—C10—O475.06 (13)
C2—C3—C4—C5−1.0 (3)O2—C9—C10—O316.0 (2)
C2—C3—C4—C7−176.90 (18)O2—C9—C10—O4−165.86 (11)
C3—C4—C5—C60.8 (3)C8—C9—C10—O3143.17 (16)
C7—C4—C5—C6176.83 (19)C8—C9—C10—O4−38.69 (17)
C3—C4—C7—N181.02 (19)
D—H···AD—HH···AD···AD—H···A
N1—H4···O1i0.907 (18)2.315 (18)3.1158 (15)147.0 (13)
O2—H9···O1i0.822.513.0673 (13)127
O2—H9···N1i0.821.992.7826 (16)162
C11—H11A···O3ii0.962.543.480 (2)166
C11—H11C···O2iii0.962.533.419 (2)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H4⋯O1i0.907 (18)2.315 (18)3.1158 (15)147.0 (13)
O2—H9⋯O1i0.822.513.0673 (13)127
O2—H9⋯N1i0.821.992.7826 (16)162
C11—H11A⋯O3ii0.962.543.480 (2)166
C11—H11C⋯O2iii0.962.533.419 (2)154

Symmetry codes: (i) ; (ii) ; (iii) .

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