| Literature DB >> 22590287 |
Kwang Ha1.
Abstract
The title compound, C(17)H(16)N(4)O(6), is aEntities:
Year: 2012 PMID: 22590287 PMCID: PMC3344525 DOI: 10.1107/S1600536812015504
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H16N4O6 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3572 reflections |
| θ = 2.5–25.3° | |
| µ = 0.12 mm−1 | |
| Block, yellow | |
| 0.31 × 0.17 × 0.15 mm |
| Bruker SMART 1000 CCD diffractometer | 4120 independent reflections |
| Radiation source: fine-focus sealed tube | 2286 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.3°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 23432 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4120 reflections | (Δ/σ)max < 0.001 |
| 252 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.18305 (12) | 0.22185 (11) | 0.21082 (6) | 0.0397 (4) | |
| O2 | 0.63010 (14) | 0.28176 (13) | 0.05617 (7) | 0.0495 (4) | |
| O3 | 0.50263 (15) | 0.25797 (13) | −0.01460 (7) | 0.0522 (5) | |
| O4 | 0.62220 (12) | −0.00556 (11) | 0.48734 (6) | 0.0383 (4) | |
| O5 | 0.96696 (14) | −0.02327 (15) | 0.27155 (8) | 0.0636 (5) | |
| O6 | 1.08562 (13) | −0.02659 (13) | 0.34711 (8) | 0.0536 (5) | |
| N1 | 0.52991 (16) | 0.26527 (13) | 0.03929 (9) | 0.0372 (4) | |
| N2 | 0.34001 (16) | 0.22765 (13) | 0.29410 (8) | 0.0325 (4) | |
| H2N | 0.491 (2) | 0.0128 (18) | 0.4342 (13) | 0.061 (8)* | |
| N3 | 0.48198 (14) | 0.01663 (13) | 0.39362 (9) | 0.0300 (4) | |
| H3N | 0.266 (3) | 0.2203 (19) | 0.2781 (13) | 0.079 (9)* | |
| N4 | 0.98619 (16) | −0.02418 (14) | 0.32658 (9) | 0.0388 (5) | |
| C1 | 0.26324 (17) | 0.23326 (14) | 0.17156 (9) | 0.0293 (5) | |
| C2 | 0.23969 (18) | 0.23465 (14) | 0.10807 (9) | 0.0321 (5) | |
| H2 | 0.1619 | 0.2290 | 0.0947 | 0.038* | |
| C3 | 0.32499 (18) | 0.24381 (14) | 0.06613 (9) | 0.0320 (5) | |
| H3 | 0.3065 | 0.2433 | 0.0241 | 0.038* | |
| C4 | 0.44063 (18) | 0.25404 (14) | 0.08474 (9) | 0.0296 (5) | |
| C5 | 0.46937 (17) | 0.25358 (14) | 0.14490 (9) | 0.0294 (5) | |
| H5 | 0.5479 | 0.2608 | 0.1567 | 0.035* | |
| C6 | 0.38325 (17) | 0.24253 (14) | 0.18915 (9) | 0.0270 (4) | |
| C7 | 0.41546 (18) | 0.23887 (14) | 0.25139 (9) | 0.0305 (5) | |
| H7 | 0.4948 | 0.2449 | 0.2619 | 0.037* | |
| C8 | 0.36602 (19) | 0.22306 (16) | 0.35868 (9) | 0.0349 (5) | |
| H8A | 0.3365 | 0.2858 | 0.3787 | 0.042* | |
| H8B | 0.4508 | 0.2208 | 0.3644 | 0.042* | |
| C9 | 0.31172 (18) | 0.12934 (15) | 0.38808 (9) | 0.0330 (5) | |
| H9A | 0.2285 | 0.1280 | 0.3777 | 0.040* | |
| H9B | 0.3179 | 0.1364 | 0.4327 | 0.040* | |
| C10 | 0.36533 (17) | 0.02741 (15) | 0.36953 (9) | 0.0320 (5) | |
| H10A | 0.3166 | −0.0295 | 0.3847 | 0.038* | |
| H10B | 0.3678 | 0.0229 | 0.3247 | 0.038* | |
| C11 | 0.57442 (17) | 0.00744 (14) | 0.36110 (9) | 0.0274 (4) | |
| H11 | 0.5665 | 0.0098 | 0.3182 | 0.033* | |
| C12 | 0.68702 (17) | −0.00597 (14) | 0.38544 (8) | 0.0261 (4) | |
| C13 | 0.70501 (18) | −0.01066 (14) | 0.45046 (9) | 0.0281 (4) | |
| C14 | 0.82265 (18) | −0.02299 (16) | 0.47050 (9) | 0.0353 (5) | |
| H14 | 0.8382 | −0.0277 | 0.5127 | 0.042* | |
| C15 | 0.91170 (18) | −0.02810 (16) | 0.43079 (9) | 0.0347 (5) | |
| H15 | 0.9885 | −0.0358 | 0.4453 | 0.042* | |
| C16 | 0.89073 (17) | −0.02195 (15) | 0.36768 (9) | 0.0293 (4) | |
| C17 | 0.78028 (17) | −0.01169 (14) | 0.34546 (9) | 0.0293 (5) | |
| H17 | 0.7675 | −0.0085 | 0.3029 | 0.035* |
| O1 | 0.0255 (8) | 0.0574 (10) | 0.0362 (9) | −0.0014 (7) | 0.0025 (7) | 0.0090 (7) |
| O2 | 0.0335 (9) | 0.0701 (12) | 0.0450 (10) | 0.0044 (8) | 0.0064 (8) | 0.0105 (8) |
| O3 | 0.0570 (11) | 0.0726 (12) | 0.0269 (9) | 0.0072 (8) | 0.0058 (8) | −0.0012 (7) |
| O4 | 0.0334 (8) | 0.0565 (10) | 0.0250 (8) | 0.0030 (7) | 0.0042 (7) | 0.0031 (6) |
| O5 | 0.0469 (11) | 0.1112 (16) | 0.0326 (10) | 0.0119 (10) | 0.0109 (8) | 0.0110 (9) |
| O6 | 0.0278 (9) | 0.0770 (13) | 0.0560 (11) | 0.0016 (8) | 0.0043 (8) | 0.0064 (9) |
| N1 | 0.0380 (11) | 0.0407 (11) | 0.0330 (11) | 0.0072 (8) | 0.0040 (9) | 0.0031 (8) |
| N2 | 0.0311 (10) | 0.0420 (11) | 0.0243 (10) | 0.0018 (8) | −0.0008 (8) | 0.0051 (7) |
| N3 | 0.0304 (10) | 0.0370 (10) | 0.0225 (10) | 0.0030 (7) | −0.0016 (8) | −0.0009 (7) |
| N4 | 0.0323 (11) | 0.0474 (12) | 0.0367 (11) | 0.0026 (8) | 0.0050 (9) | 0.0073 (8) |
| C1 | 0.0265 (11) | 0.0295 (11) | 0.0318 (11) | −0.0006 (8) | −0.0022 (9) | 0.0047 (8) |
| C2 | 0.0304 (11) | 0.0321 (12) | 0.0336 (12) | −0.0020 (9) | −0.0048 (9) | 0.0041 (9) |
| C3 | 0.0391 (13) | 0.0284 (11) | 0.0285 (11) | −0.0002 (9) | −0.0043 (9) | 0.0018 (8) |
| C4 | 0.0306 (12) | 0.0312 (11) | 0.0271 (11) | 0.0023 (9) | 0.0029 (9) | 0.0029 (8) |
| C5 | 0.0241 (10) | 0.0316 (12) | 0.0324 (12) | 0.0015 (8) | −0.0017 (9) | 0.0024 (8) |
| C6 | 0.0260 (10) | 0.0279 (11) | 0.0272 (11) | 0.0023 (8) | −0.0019 (9) | 0.0040 (8) |
| C7 | 0.0285 (11) | 0.0314 (11) | 0.0315 (11) | 0.0009 (9) | 0.0011 (9) | 0.0022 (8) |
| C8 | 0.0368 (12) | 0.0418 (13) | 0.0260 (12) | 0.0022 (10) | −0.0015 (9) | 0.0002 (9) |
| C9 | 0.0315 (12) | 0.0400 (13) | 0.0274 (11) | 0.0029 (9) | 0.0019 (9) | 0.0022 (9) |
| C10 | 0.0278 (11) | 0.0425 (13) | 0.0256 (11) | 0.0015 (9) | −0.0017 (9) | 0.0013 (9) |
| C11 | 0.0324 (11) | 0.0280 (11) | 0.0218 (10) | 0.0010 (8) | −0.0012 (9) | −0.0004 (8) |
| C12 | 0.0288 (11) | 0.0263 (11) | 0.0233 (10) | 0.0014 (8) | −0.0002 (8) | 0.0009 (7) |
| C13 | 0.0317 (11) | 0.0276 (11) | 0.0251 (11) | −0.0018 (8) | 0.0004 (9) | 0.0010 (8) |
| C14 | 0.0331 (12) | 0.0469 (13) | 0.0260 (11) | −0.0042 (10) | −0.0033 (9) | 0.0041 (9) |
| C15 | 0.0284 (11) | 0.0414 (13) | 0.0344 (13) | −0.0037 (10) | −0.0029 (9) | 0.0040 (9) |
| C16 | 0.0300 (11) | 0.0306 (11) | 0.0274 (11) | −0.0010 (8) | 0.0036 (9) | 0.0036 (8) |
| C17 | 0.0346 (12) | 0.0297 (11) | 0.0236 (10) | −0.0003 (9) | 0.0011 (9) | 0.0015 (8) |
| O1—C1 | 1.277 (2) | C5—H5 | 0.9500 |
| O2—N1 | 1.236 (2) | C6—C7 | 1.422 (3) |
| O3—N1 | 1.233 (2) | C7—H7 | 0.9500 |
| O4—C13 | 1.258 (2) | C8—C9 | 1.519 (3) |
| O5—N4 | 1.233 (2) | C8—H8A | 0.9900 |
| O6—N4 | 1.237 (2) | C8—H8B | 0.9900 |
| N1—C4 | 1.446 (3) | C9—C10 | 1.523 (3) |
| N2—C7 | 1.292 (2) | C9—H9A | 0.9900 |
| N2—C8 | 1.456 (3) | C9—H9B | 0.9900 |
| N2—H3N | 0.93 (3) | C10—H10A | 0.9900 |
| N3—C11 | 1.293 (3) | C10—H10B | 0.9900 |
| N3—C10 | 1.457 (3) | C11—C12 | 1.420 (3) |
| N3—H2N | 0.90 (3) | C11—H11 | 0.9500 |
| N4—C16 | 1.429 (3) | C12—C17 | 1.395 (3) |
| C1—C2 | 1.426 (3) | C12—C13 | 1.449 (3) |
| C1—C6 | 1.447 (3) | C13—C14 | 1.440 (3) |
| C2—C3 | 1.357 (3) | C14—C15 | 1.353 (3) |
| C2—H2 | 0.9500 | C14—H14 | 0.9500 |
| C3—C4 | 1.406 (3) | C15—C16 | 1.414 (3) |
| C3—H3 | 0.9500 | C15—H15 | 0.9500 |
| C4—C5 | 1.367 (3) | C16—C17 | 1.375 (3) |
| C5—C6 | 1.402 (3) | C17—H17 | 0.9500 |
| O3—N1—O2 | 122.92 (18) | N2—C8—H8B | 109.4 |
| O3—N1—C4 | 118.46 (18) | C9—C8—H8B | 109.4 |
| O2—N1—C4 | 118.62 (18) | H8A—C8—H8B | 108.0 |
| C7—N2—C8 | 125.25 (19) | C8—C9—C10 | 114.79 (17) |
| C7—N2—H3N | 110.9 (18) | C8—C9—H9A | 108.6 |
| C8—N2—H3N | 123.8 (18) | C10—C9—H9A | 108.6 |
| C11—N3—C10 | 124.97 (18) | C8—C9—H9B | 108.6 |
| C11—N3—H2N | 116.4 (16) | C10—C9—H9B | 108.6 |
| C10—N3—H2N | 118.5 (16) | H9A—C9—H9B | 107.5 |
| O5—N4—O6 | 121.87 (18) | N3—C10—C9 | 111.32 (17) |
| O5—N4—C16 | 118.95 (18) | N3—C10—H10A | 109.4 |
| O6—N4—C16 | 119.19 (19) | C9—C10—H10A | 109.4 |
| O1—C1—C2 | 121.84 (18) | N3—C10—H10B | 109.4 |
| O1—C1—C6 | 121.70 (18) | C9—C10—H10B | 109.4 |
| C2—C1—C6 | 116.44 (18) | H10A—C10—H10B | 108.0 |
| C3—C2—C1 | 122.04 (19) | N3—C11—C12 | 124.13 (18) |
| C3—C2—H2 | 119.0 | N3—C11—H11 | 117.9 |
| C1—C2—H2 | 119.0 | C12—C11—H11 | 117.9 |
| C2—C3—C4 | 120.12 (19) | C17—C12—C11 | 118.54 (17) |
| C2—C3—H3 | 119.9 | C17—C12—C13 | 120.74 (18) |
| C4—C3—H3 | 119.9 | C11—C12—C13 | 120.70 (17) |
| C5—C4—C3 | 120.94 (19) | O4—C13—C14 | 121.84 (18) |
| C5—C4—N1 | 119.89 (19) | O4—C13—C12 | 121.81 (18) |
| C3—C4—N1 | 119.17 (18) | C14—C13—C12 | 116.34 (18) |
| C4—C5—C6 | 120.15 (18) | C15—C14—C13 | 121.78 (19) |
| C4—C5—H5 | 119.9 | C15—C14—H14 | 119.1 |
| C6—C5—H5 | 119.9 | C13—C14—H14 | 119.1 |
| C5—C6—C7 | 119.23 (18) | C14—C15—C16 | 120.17 (19) |
| C5—C6—C1 | 120.30 (18) | C14—C15—H15 | 119.9 |
| C7—C6—C1 | 120.47 (18) | C16—C15—H15 | 119.9 |
| N2—C7—C6 | 121.97 (19) | C17—C16—C15 | 121.02 (18) |
| N2—C7—H7 | 119.0 | C17—C16—N4 | 119.63 (18) |
| C6—C7—H7 | 119.0 | C15—C16—N4 | 119.33 (18) |
| N2—C8—C9 | 111.38 (17) | C16—C17—C12 | 119.93 (18) |
| N2—C8—H8A | 109.4 | C16—C17—H17 | 120.0 |
| C9—C8—H8A | 109.4 | C12—C17—H17 | 120.0 |
| O1—C1—C2—C3 | −178.08 (18) | C11—N3—C10—C9 | −118.0 (2) |
| C6—C1—C2—C3 | 0.2 (3) | C8—C9—C10—N3 | 69.0 (2) |
| C1—C2—C3—C4 | −1.1 (3) | C10—N3—C11—C12 | −178.09 (18) |
| C2—C3—C4—C5 | 0.9 (3) | N3—C11—C12—C17 | −178.00 (18) |
| C2—C3—C4—N1 | −179.06 (17) | N3—C11—C12—C13 | 0.3 (3) |
| O3—N1—C4—C5 | 174.81 (18) | C17—C12—C13—O4 | 179.94 (17) |
| O2—N1—C4—C5 | −5.2 (3) | C11—C12—C13—O4 | 1.7 (3) |
| O3—N1—C4—C3 | −5.2 (3) | C17—C12—C13—C14 | −0.9 (3) |
| O2—N1—C4—C3 | 174.75 (18) | C11—C12—C13—C14 | −179.17 (17) |
| C3—C4—C5—C6 | 0.2 (3) | O4—C13—C14—C15 | −179.76 (19) |
| N1—C4—C5—C6 | −179.88 (17) | C12—C13—C14—C15 | 1.1 (3) |
| C4—C5—C6—C7 | 177.95 (18) | C13—C14—C15—C16 | −0.4 (3) |
| C4—C5—C6—C1 | −1.0 (3) | C14—C15—C16—C17 | −0.6 (3) |
| O1—C1—C6—C5 | 179.14 (18) | C14—C15—C16—N4 | 178.00 (18) |
| C2—C1—C6—C5 | 0.8 (3) | O5—N4—C16—C17 | −4.5 (3) |
| O1—C1—C6—C7 | 0.2 (3) | O6—N4—C16—C17 | 175.25 (19) |
| C2—C1—C6—C7 | −178.14 (17) | O5—N4—C16—C15 | 176.89 (18) |
| C8—N2—C7—C6 | 179.92 (17) | O6—N4—C16—C15 | −3.4 (3) |
| C5—C6—C7—N2 | −179.22 (18) | C15—C16—C17—C12 | 0.8 (3) |
| C1—C6—C7—N2 | −0.2 (3) | N4—C16—C17—C12 | −177.83 (17) |
| C7—N2—C8—C9 | −128.3 (2) | C11—C12—C17—C16 | 178.29 (17) |
| N2—C8—C9—C10 | 69.6 (2) | C13—C12—C17—C16 | 0.0 (3) |
| H··· | ||||
| N2—H3 | 0.93 (3) | 1.77 (3) | 2.583 (2) | 145 (3) |
| N3—H2 | 0.90 (3) | 1.93 (3) | 2.642 (2) | 135 (2) |
| N3—H2 | 0.90 (3) | 2.17 (3) | 2.891 (2) | 136 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H3 | 0.93 (3) | 1.77 (3) | 2.583 (2) | 145 (3) |
| N3—H2 | 0.90 (3) | 1.93 (3) | 2.642 (2) | 135 (2) |
| N3—H2 | 0.90 (3) | 2.17 (3) | 2.891 (2) | 136 (2) |
Symmetry code: (i) .