Literature DB >> 22590283

rac-Methyl 2-(2-formyl-4-nitro-phen-oxy)hexa-noate.

Jun-Song Song1, De-Cai Wang, Xue-Jun He, Jiang-Kai Qiu, Ping-Kai Ou-Yang.   

Abstract

In the racemic title compound, C(14)H(17)NO(6), the plane of the ester group of the methyl hexa-noate side chain makes a dihedral angle of 80.0 (2)° with the benzene ring, while the nitro group is approximately coplanar with the benzene ring [dihedral angle = 10.3 (2)°]. In the crystal, mol-ecules form weak aromatic C-H⋯O(nitro) hydrogen-bonding inter-actions, giving inversion dimers [graph set R(2) (2)(8)].

Entities:  

Year:  2012        PMID: 22590283      PMCID: PMC3344521          DOI: 10.1107/S1600536812015462

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of the title compound, see: Dale & White (2007 ▶). For graph-set analysis, see: Etter et al. (1990 ▶)

Experimental

Crystal data

C14H17NO6 M = 295.29 Monoclinic, a = 14.918 (3) Å b = 4.922 (1) Å c = 20.928 (4) Å β = 103.26 (3)° V = 1495.7 (5) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 four-circle diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.980, T max = 0.990 2722 measured reflections 2722 independent reflections 1228 reflections with I > 2σ(I) 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.076 wR(F 2) = 0.172 S = 1.00 2722 reflections 172 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812015462/zs2196sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812015462/zs2196Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812015462/zs2196Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H17NO6F(000) = 624
Mr = 295.29Dx = 1.311 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 14.918 (3) Åθ = 9–13°
b = 4.922 (1) ŵ = 0.10 mm1
c = 20.928 (4) ÅT = 293 K
β = 103.26 (3)°Block, colourless
V = 1495.7 (5) Å30.20 × 0.10 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 four-circle diffractometer1228 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.000
Graphite monochromatorθmax = 25.4°, θmin = 1.5°
ω–2θ scansh = −17→17
Absorption correction: ψ scan (North et al., 1968)k = 0→5
Tmin = 0.980, Tmax = 0.990l = 0→25
2722 measured reflections3 standard reflections every 200 reflections
2722 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.076Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.172H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.050P)2] where P = (Fo2 + 2Fc2)/3
2722 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N−0.0326 (2)0.6463 (8)0.59117 (19)0.0672 (11)
C10.2020 (3)0.5437 (8)0.56249 (18)0.0592 (11)
H1A0.23890.61480.53630.071*
O1−0.0535 (2)0.8534 (7)0.55953 (18)0.0926 (11)
C20.1162 (3)0.6501 (9)0.55803 (19)0.0604 (11)
H2A0.09460.79420.53000.072*
O2−0.0834 (2)0.5218 (8)0.61742 (19)0.1013 (13)
C30.0617 (3)0.5338 (9)0.59740 (18)0.0544 (10)
O30.16665 (19)−0.0836 (7)0.72916 (13)0.0747 (10)
O40.31794 (16)0.2096 (6)0.61157 (12)0.0598 (8)
C40.0913 (2)0.3232 (7)0.64028 (16)0.0437 (9)
H4A0.05330.24960.66540.052*
C50.1794 (2)0.2243 (8)0.64485 (17)0.0496 (9)
O50.2966 (2)0.0517 (6)0.48813 (13)0.0675 (9)
C60.2353 (3)0.3330 (8)0.60504 (17)0.0529 (10)
O60.3773 (2)0.3910 (8)0.46304 (16)0.0990 (12)
C70.2119 (3)0.0063 (8)0.69327 (17)0.0549 (10)
H7A0.2704−0.06510.69610.066*
C80.3791 (3)0.3212 (9)0.5738 (2)0.0645 (12)
H8A0.38390.51830.58030.077*
C90.3496 (3)0.2609 (11)0.5030 (2)0.0663 (12)
C100.2656 (3)−0.0163 (11)0.41826 (19)0.0806 (15)
H10A0.2268−0.17410.41350.121*
H10B0.3180−0.05290.40030.121*
H10C0.23150.13370.39530.121*
C110.4715 (3)0.1900 (12)0.6028 (2)0.0907 (17)
H11A0.4652−0.00340.59410.109*
H11B0.51530.25880.57900.109*
C120.5116 (4)0.2243 (12)0.6721 (3)0.107
H12A0.46670.17030.69670.128*
H12B0.56420.10400.68460.128*
C130.5406 (4)0.4958 (13)0.6900 (3)0.122
H13A0.48810.60340.69490.147*
H13B0.56560.57680.65550.147*
C140.6167 (4)0.4976 (13)0.7569 (3)0.123
H14A0.63670.68070.76760.184*
H14B0.66830.38910.75210.184*
H14C0.59120.42410.79130.184*
U11U22U33U12U13U23
N0.055 (2)0.056 (3)0.086 (3)0.014 (2)0.008 (2)−0.010 (2)
C10.088 (3)0.040 (2)0.050 (2)−0.006 (2)0.018 (2)−0.0012 (19)
O10.079 (2)0.073 (2)0.122 (3)0.031 (2)0.016 (2)0.010 (2)
C20.073 (3)0.048 (3)0.057 (2)0.008 (2)0.008 (2)0.004 (2)
O20.063 (2)0.111 (3)0.138 (3)0.010 (2)0.040 (2)0.022 (3)
C30.053 (2)0.057 (3)0.050 (2)0.003 (2)0.0052 (17)−0.010 (2)
O30.0661 (19)0.094 (3)0.0691 (18)−0.0031 (18)0.0249 (15)0.0283 (18)
O40.0533 (16)0.074 (2)0.0563 (16)0.0033 (15)0.0203 (13)0.0139 (15)
C40.046 (2)0.036 (2)0.049 (2)−0.0041 (17)0.0126 (16)0.0033 (18)
C50.051 (2)0.044 (2)0.051 (2)−0.0027 (19)0.0062 (18)−0.0037 (18)
O50.075 (2)0.070 (2)0.0647 (19)−0.0062 (17)0.0305 (15)0.0095 (17)
C60.057 (2)0.065 (3)0.0377 (18)−0.003 (2)0.0119 (18)0.0054 (19)
O60.102 (3)0.116 (3)0.088 (2)−0.025 (2)0.042 (2)0.016 (2)
C70.053 (2)0.052 (3)0.058 (2)−0.019 (2)0.010 (2)−0.010 (2)
C80.048 (2)0.071 (3)0.083 (3)−0.005 (2)0.031 (2)0.018 (2)
C90.053 (2)0.077 (3)0.078 (3)0.010 (3)0.032 (2)0.021 (3)
C100.061 (3)0.115 (4)0.063 (3)0.008 (3)0.009 (2)−0.011 (3)
C110.063 (3)0.131 (5)0.078 (3)−0.010 (3)0.018 (2)0.002 (3)
C120.1070.1070.1070.0000.0240.000
C130.1220.1220.1220.0000.0280.000
C140.1230.1230.1230.0000.0280.000
N—O21.200 (4)C7—H7A0.9300
N—O11.216 (4)C8—C91.476 (6)
N—C31.490 (5)C8—C111.517 (6)
C1—C21.366 (5)C8—H8A0.9800
C1—C61.383 (5)C10—H10A0.9600
C1—H1A0.9300C10—H10B0.9600
C2—C31.405 (5)C10—H10C0.9600
C2—H2A0.9300C11—C121.447 (6)
C3—C41.376 (5)C11—H11A0.9700
O3—C71.204 (4)C11—H11B0.9700
O4—C61.353 (4)C12—C131.428 (7)
O4—C81.446 (4)C12—H12A0.9700
C4—C51.385 (5)C12—H12B0.9700
C4—H4A0.9300C13—C141.587 (7)
C5—C61.412 (5)C13—H13A0.9700
C5—C71.479 (5)C13—H13B0.9700
O5—C91.291 (5)C14—H14A0.9600
O5—C101.468 (4)C14—H14B0.9600
O6—C91.200 (5)C14—H14C0.9600
O2—N—O1124.6 (4)O6—C9—C8121.4 (5)
O2—N—C3116.9 (4)O5—C9—C8115.3 (4)
O1—N—C3118.5 (4)O5—C10—H10A109.5
C2—C1—C6121.6 (4)O5—C10—H10B109.5
C2—C1—H1A119.2H10A—C10—H10B109.5
C6—C1—H1A119.2O5—C10—H10C109.5
C1—C2—C3117.6 (4)H10A—C10—H10C109.5
C1—C2—H2A121.2H10B—C10—H10C109.5
C3—C2—H2A121.2C12—C11—C8118.7 (5)
C4—C3—C2123.2 (4)C12—C11—H11A107.6
C4—C3—N119.5 (4)C8—C11—H11A107.6
C2—C3—N117.3 (4)C12—C11—H11B107.6
C6—O4—C8116.7 (3)C8—C11—H11B107.6
C3—C4—C5117.8 (3)H11A—C11—H11B107.1
C3—C4—H4A121.1C13—C12—C11113.7 (6)
C5—C4—H4A121.1C13—C12—H12A108.8
C4—C5—C6120.4 (4)C11—C12—H12A108.8
C4—C5—C7117.3 (3)C13—C12—H12B108.8
C6—C5—C7122.3 (4)C11—C12—H12B108.8
C9—O5—C10117.2 (4)H12A—C12—H12B107.7
O4—C6—C1125.9 (4)C12—C13—C14110.4 (6)
O4—C6—C5114.7 (3)C12—C13—H13A109.6
C1—C6—C5119.4 (4)C14—C13—H13A109.6
O3—C7—C5123.5 (4)C12—C13—H13B109.6
O3—C7—H7A118.3C14—C13—H13B109.6
C5—C7—H7A118.3H13A—C13—H13B108.1
O4—C8—C9113.1 (3)C13—C14—H14A109.5
O4—C8—C11104.4 (3)C13—C14—H14B109.5
C9—C8—C11110.5 (4)H14A—C14—H14B109.5
O4—C8—H8A109.6C13—C14—H14C109.5
C9—C8—H8A109.6H14A—C14—H14C109.5
C11—C8—H8A109.6H14B—C14—H14C109.5
O6—C9—O5123.2 (5)
C6—C1—C2—C3−1.3 (6)C4—C5—C6—C11.5 (5)
C1—C2—C3—C41.0 (6)C7—C5—C6—C1−177.6 (3)
C1—C2—C3—N−178.6 (3)C4—C5—C7—O3−1.5 (5)
O2—N—C3—C4−10.1 (6)C6—C5—C7—O3177.6 (4)
O1—N—C3—C4170.9 (4)C6—O4—C8—C9−72.8 (5)
O2—N—C3—C2169.5 (4)C6—O4—C8—C11166.9 (4)
O1—N—C3—C2−9.6 (5)C10—O5—C9—O6−3.7 (6)
C2—C3—C4—C50.6 (5)C10—O5—C9—C8−180.0 (3)
N—C3—C4—C5−179.9 (3)O4—C8—C9—O6160.8 (4)
C3—C4—C5—C6−1.8 (5)C11—C8—C9—O6−82.5 (6)
C3—C4—C5—C7177.3 (3)O4—C8—C9—O5−22.8 (5)
C8—O4—C6—C14.5 (5)C11—C8—C9—O593.8 (4)
C8—O4—C6—C5−177.5 (3)O4—C8—C11—C12−57.5 (6)
C2—C1—C6—O4178.0 (4)C9—C8—C11—C12−179.5 (5)
C2—C1—C6—C50.1 (6)C8—C11—C12—C13−68.5 (7)
C4—C5—C6—O4−176.6 (3)C11—C12—C13—C14−157.4 (5)
C7—C5—C6—O44.3 (5)
D—H···AD—HH···AD···AD—H···A
C12—H12A···O40.972.512.877 (6)102
C7—H7A···O40.932.462.769 (5)100
C2—H2A···O1i0.932.523.442 (6)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O1i0.932.523.442 (6)169

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

Review 3.  Dronedarone: an amiodarone analog for the treatment of atrial fibrillation and atrial flutter.

Authors:  Krista M Dale; C Michael White
Journal:  Ann Pharmacother       Date:  2007-03-27       Impact factor: 3.154

  3 in total

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