Literature DB >> 22590278

(R)-N-(Biphenyl-4-yl)-tert-butane-sulfinamide.

Binbin Zhang, Yan Wang, Xiaofei Sun, Wenguo Wang, Qingle Zeng.   

Abstract

In the title compound, C(16)H(19)NOS, the dihedral angle between the two aromatic rings is 38.98 (8)°. The crystal structure is stabilized by N-H⋯O hydrogen bonds, which link neighbouring mol-ecules into chains running parallel to the a axis.

Entities:  

Year:  2012        PMID: 22590278      PMCID: PMC3344516          DOI: 10.1107/S1600536812015127

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Sun et al. (2012 ▶); Jasinski et al. (2012 ▶); Gainsford et al. (2011 ▶).

Experimental

Crystal data

C16H19NOS M = 273.38 Orthorhombic, a = 9.3588 (5) Å b = 11.9452 (5) Å c = 13.3136 (7) Å V = 1488.36 (12) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 293 K 0.43 × 0.41 × 0.40 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.988, T max = 1.000 3983 measured reflections 2766 independent reflections 2325 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.097 S = 1.06 2766 reflections 175 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.22 e Å−3 Absolute structure: assigned from the known absolute structure of the (R)-tert-butanesulfinamide starting material; the Flack (1983 ▶) parameter is consistent with this assignment, 1017 Friedel pairs Flack parameter: 0.03 (10) Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812015127/rz2735sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812015127/rz2735Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812015127/rz2735Isup3.cdx Supplementary material file. DOI: 10.1107/S1600536812015127/rz2735Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H19NOSDx = 1.220 Mg m3
Mr = 273.38Melting point: 427 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.7107 Å
Hall symbol: P 2ac 2abCell parameters from 1425 reflections
a = 9.3588 (5) Åθ = 3.1–28.9°
b = 11.9452 (5) ŵ = 0.21 mm1
c = 13.3136 (7) ÅT = 293 K
V = 1488.36 (12) Å3Block, colourless
Z = 40.43 × 0.41 × 0.40 mm
F(000) = 584
Oxford Diffraction Xcalibur Eos diffractometer2766 independent reflections
Radiation source: Enhance (Mo) X-ray Source2325 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
Detector resolution: 16.0874 pixels mm-1θmax = 26.4°, θmin = 3.1°
ω scansh = −11→5
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −7→14
Tmin = 0.988, Tmax = 1.000l = −16→16
3983 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0358P)2 + 0.0448P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2766 reflectionsΔρmax = 0.19 e Å3
175 parametersΔρmin = −0.22 e Å3
0 restraintsAbsolute structure: assigned from the known absolute structure of the (R)-tert-butanesulfinamide starting material; the Flack (1983) parameter is consistent with this assignment, 1017 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.03 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.15256 (8)−0.31264 (5)−0.40407 (5)0.04256 (19)
O1−0.2124 (3)−0.22979 (16)−0.47627 (16)0.0639 (7)
N1−0.0065 (3)−0.36901 (17)−0.45167 (18)0.0488 (7)
H10.0702−0.3294−0.45360.059*
C1−0.0021 (3)−0.4790 (2)−0.48927 (19)0.0355 (6)
C2−0.1153 (3)−0.5532 (2)−0.4810 (2)0.0415 (7)
H2−0.1987−0.5318−0.44820.050*
C3−0.1032 (3)−0.6600 (2)−0.5220 (2)0.0400 (7)
H3−0.1801−0.7090−0.51660.048*
C40.0197 (3)−0.6959 (2)−0.57082 (17)0.0357 (6)
C50.1315 (3)−0.6196 (2)−0.5777 (2)0.0395 (6)
H50.2149−0.6404−0.61070.047*
C60.1217 (3)−0.5131 (2)−0.5366 (2)0.0423 (7)
H60.1990−0.4644−0.54100.051*
C70.0310 (3)−0.8089 (2)−0.61585 (18)0.0377 (6)
C8−0.0253 (3)−0.9024 (2)−0.5693 (2)0.0476 (8)
H8−0.0694−0.8944−0.50710.057*
C9−0.0181 (4)−1.0075 (2)−0.6126 (2)0.0558 (8)
H9−0.0581−1.0688−0.58010.067*
C100.0480 (4)−1.0208 (3)−0.7031 (3)0.0600 (9)
H100.0535−1.0914−0.73240.072*
C110.1060 (3)−0.9301 (3)−0.7507 (2)0.0586 (9)
H110.1514−0.9395−0.81220.070*
C120.0980 (3)−0.8240 (2)−0.7081 (2)0.0471 (7)
H120.1375−0.7630−0.74140.057*
C13−0.0712 (3)−0.2310 (2)−0.3024 (2)0.0461 (7)
C14−0.1958 (4)−0.1746 (3)−0.2498 (2)0.0769 (12)
H14A−0.2385−0.1207−0.29410.115*
H14B−0.1622−0.1375−0.19030.115*
H14C−0.2656−0.2299−0.23160.115*
C15−0.0002 (6)−0.3136 (3)−0.2314 (3)0.0911 (14)
H15A−0.0670−0.3713−0.21380.137*
H15B0.0301−0.2752−0.17180.137*
H15C0.0812−0.3465−0.26390.137*
C160.0316 (4)−0.1448 (2)−0.3427 (3)0.0670 (10)
H16A0.1088−0.1818−0.37670.100*
H16B0.0690−0.1013−0.28800.100*
H16C−0.0173−0.0965−0.38890.100*
U11U22U33U12U13U23
S10.0340 (4)0.0355 (3)0.0581 (4)0.0019 (3)−0.0013 (4)−0.0073 (4)
O10.0696 (17)0.0521 (12)0.0701 (14)0.0165 (12)−0.0276 (13)−0.0088 (11)
N10.0381 (15)0.0330 (11)0.0754 (16)−0.0062 (11)0.0102 (13)−0.0137 (11)
C10.0374 (16)0.0289 (13)0.0403 (14)0.0022 (12)−0.0009 (13)−0.0009 (11)
C20.0343 (16)0.0364 (14)0.0538 (16)0.0000 (13)0.0130 (14)−0.0031 (13)
C30.0377 (16)0.0319 (14)0.0505 (16)−0.0043 (12)0.0086 (14)−0.0013 (12)
C40.0386 (15)0.0326 (12)0.0360 (13)0.0026 (13)−0.0008 (12)0.0012 (12)
C50.0306 (15)0.0389 (13)0.0488 (16)0.0043 (12)0.0058 (14)−0.0017 (13)
C60.0363 (17)0.0353 (14)0.0552 (17)−0.0038 (13)0.0004 (14)−0.0009 (13)
C70.0333 (14)0.0373 (13)0.0423 (14)0.0061 (13)−0.0057 (12)−0.0024 (13)
C80.0546 (19)0.0393 (14)0.0488 (17)−0.0007 (15)0.0038 (16)−0.0023 (13)
C90.063 (2)0.0360 (14)0.068 (2)−0.0014 (16)−0.0094 (19)−0.0060 (15)
C100.054 (2)0.0503 (18)0.075 (2)0.0092 (17)−0.021 (2)−0.0296 (18)
C110.046 (2)0.073 (2)0.0567 (19)0.0086 (19)−0.0018 (16)−0.0280 (18)
C120.0446 (18)0.0491 (16)0.0477 (16)0.0017 (15)−0.0003 (15)−0.0044 (15)
C130.0484 (19)0.0452 (15)0.0447 (16)0.0038 (14)−0.0030 (15)−0.0074 (14)
C140.075 (3)0.085 (3)0.070 (2)0.006 (2)0.014 (2)−0.030 (2)
C150.125 (4)0.076 (2)0.073 (2)0.018 (3)−0.036 (3)−0.002 (2)
C160.065 (2)0.0593 (19)0.077 (2)−0.0194 (18)0.001 (2)−0.0224 (18)
S1—O11.489 (2)C9—H90.9300
S1—N11.650 (2)C9—C101.364 (4)
S1—C131.833 (3)C10—H100.9300
N1—H10.8600C10—C111.367 (4)
N1—C11.407 (3)C11—H110.9300
C1—C21.385 (3)C11—C121.391 (4)
C1—C61.381 (4)C12—H120.9300
C2—H20.9300C13—C141.519 (4)
C2—C31.393 (3)C13—C151.519 (4)
C3—H30.9300C13—C161.508 (4)
C3—C41.389 (4)C14—H14A0.9600
C4—C51.390 (4)C14—H14B0.9600
C4—C71.481 (3)C14—H14C0.9600
C5—H50.9300C15—H15A0.9600
C5—C61.388 (3)C15—H15B0.9600
C6—H60.9300C15—H15C0.9600
C7—C81.381 (4)C16—H16A0.9600
C7—C121.390 (4)C16—H16B0.9600
C8—H80.9300C16—H16C0.9600
C8—C91.383 (4)
O1—S1—N1109.58 (13)C9—C10—H10120.1
O1—S1—C13106.21 (12)C9—C10—C11119.8 (3)
N1—S1—C1399.00 (13)C11—C10—H10120.1
S1—N1—H1118.6C10—C11—H11119.6
C1—N1—S1122.8 (2)C10—C11—C12120.8 (3)
C1—N1—H1118.6C12—C11—H11119.6
C2—C1—N1123.1 (3)C7—C12—C11120.2 (3)
C6—C1—N1117.5 (2)C7—C12—H12119.9
C6—C1—C2119.3 (2)C11—C12—H12119.9
C1—C2—H2120.2C14—C13—S1105.0 (2)
C1—C2—C3119.5 (3)C14—C13—C15109.7 (3)
C3—C2—H2120.2C15—C13—S1107.2 (2)
C2—C3—H3118.9C16—C13—S1111.5 (2)
C4—C3—C2122.2 (3)C16—C13—C14110.6 (3)
C4—C3—H3118.9C16—C13—C15112.6 (3)
C3—C4—C5116.8 (2)C13—C14—H14A109.5
C3—C4—C7122.0 (2)C13—C14—H14B109.5
C5—C4—C7121.2 (2)C13—C14—H14C109.5
C4—C5—H5119.1H14A—C14—H14B109.5
C6—C5—C4121.7 (3)H14A—C14—H14C109.5
C6—C5—H5119.1H14B—C14—H14C109.5
C1—C6—C5120.4 (3)C13—C15—H15A109.5
C1—C6—H6119.8C13—C15—H15B109.5
C5—C6—H6119.8C13—C15—H15C109.5
C8—C7—C4121.9 (2)H15A—C15—H15B109.5
C8—C7—C12117.6 (2)H15A—C15—H15C109.5
C12—C7—C4120.5 (2)H15B—C15—H15C109.5
C7—C8—H8119.1C13—C16—H16A109.5
C7—C8—C9121.9 (3)C13—C16—H16B109.5
C9—C8—H8119.1C13—C16—H16C109.5
C8—C9—H9120.1H16A—C16—H16B109.5
C10—C9—C8119.8 (3)H16A—C16—H16C109.5
C10—C9—H9120.1H16B—C16—H16C109.5
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.862.353.144 (3)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.862.353.144 (3)154

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-{[(Biphenyl-2-yl)diazen-yl]methyl-idene}-1,3,3-trimethyl-indoline.

Authors:  Graeme J Gainsford; Mohamed Ashraf; Andrew J Kay
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3.  1,3-Bis(biphenyl-4-yl)-2,2-dibromo-3-oxopropyl acetate.

Authors:  Jerry P Jasinski; James A Golen; B P Siddaraju; B Narayana; H S Yathirajan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11

4.  (R)-N-(3-Meth-oxy-phen-yl)-tert-butane-sulfinamide.

Authors:  Xiaofei Sun; Chuan Dai; Xingzhao Tu; Wenguo Wang; Qingle Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17
  4 in total
  1 in total

1.  (S)-N-Phenyl-tert-butane-sulfinamide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-16
  1 in total

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