Literature DB >> 22590266

(E)-Methyl 2-({2-eth-oxy-6-[(E)-(hy-droxy-imino)-meth-yl]phen-oxy}meth-yl)-3-phenyl-acrylate.

E Govindan, G Ganesh, J Srinivasan, M Bakthadoss, A Subbiahpandi.   

Abstract

In the title compound, C(20)H(21)NO(5), the dihedral angle between the mean planes through the two rings is 47.1 (8)°. The enoate group assumes an extended conformation. The hy-droxy-ethanimine group is essentially coplanar with the benzene ring, the largest deviation from the mean plane being 0.061 (1) Å for the O atom. In the crystal, mol-ecules are linked into cyclic centrosymmetric dimers with an R(2) (2)(6) motif via pairs of O-H⋯N hydrogen bonds. Inter-molecular C-H⋯O hydrogen bonds form a C(8) chain along the b axis. The crystal packing is further stabilized by C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 22590266      PMCID: PMC3344504          DOI: 10.1107/S1600536812014596

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of caffeic acids and their esters, see: Hwang et al. (2001 ▶); Altug et al. (2008 ▶); Ates et al. (2006 ▶); Atik et al. (2006 ▶); Chaudhuri (2003 ▶); Padinchare et al. (2001 ▶). For a related structure, see: SakthiMurugesan et al. (2011 ▶). For graph-set analysis of hydrogen bonds, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H21NO5 M = 355.38 Monoclinic, a = 7.4009 (3) Å b = 22.1125 (10) Å c = 11.3681 (5) Å β = 103.561 (1)° V = 1808.55 (14) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.25 × 0.22 × 0.19 mm

Data collection

Bruker APEXII CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.978, T max = 0.983 25247 measured reflections 6042 independent reflections 4293 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.167 S = 1.02 6042 reflections 238 parameters H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812014596/rn2100sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014596/rn2100Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812014596/rn2100Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H21NO5F(000) = 752
Mr = 355.38Dx = 1.305 Mg m3Dm = 1.375 Mg m3Dm measured by not measured
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6042 reflections
a = 7.4009 (3) Åθ = 1.8–31.6°
b = 22.1125 (10) ŵ = 0.09 mm1
c = 11.3681 (5) ÅT = 293 K
β = 103.561 (1)°Block, white crystalline
V = 1808.55 (14) Å30.25 × 0.22 × 0.19 mm
Z = 4
Bruker APEXII CCD area detector diffractometer6042 independent reflections
Radiation source: fine-focus sealed tube4293 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
ω and φ scansθmax = 31.6°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.978, Tmax = 0.983k = −32→32
25247 measured reflectionsl = −14→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.167H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0873P)2 + 0.3814P] where P = (Fo2 + 2Fc2)/3
6042 reflections(Δ/σ)max < 0.001
238 parametersΔρmax = 0.50 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.66305 (18)0.04722 (6)0.86324 (12)0.0369 (3)
H10.63480.04140.77990.044*
C20.52766 (17)0.07679 (6)0.91943 (11)0.0313 (2)
C30.5530 (2)0.08059 (6)1.04563 (12)0.0385 (3)
H30.65890.06411.09600.046*
C40.4225 (2)0.10847 (7)1.09493 (12)0.0423 (3)
H40.43920.10971.17860.051*
C50.2661 (2)0.13482 (7)1.02182 (13)0.0415 (3)
H50.17910.15391.05630.050*
C60.23961 (18)0.13273 (6)0.89702 (11)0.0337 (3)
C70.36826 (16)0.10210 (5)0.84560 (10)0.0291 (2)
C8−0.0070 (3)0.20593 (10)0.86177 (17)0.0632 (5)
H8A0.07400.22930.92500.076*
H8B−0.10260.18720.89510.076*
C9−0.0933 (3)0.24597 (10)0.7579 (2)0.0772 (6)
H9A0.00130.26080.72020.116*
H9B−0.15320.27950.78670.116*
H9C−0.18340.22340.70000.116*
C100.17647 (18)0.06976 (7)0.65716 (11)0.0372 (3)
H10A0.07620.09890.63490.045*
H10B0.14010.03930.70850.045*
C110.21243 (17)0.04080 (6)0.54594 (11)0.0329 (3)
C120.28726 (19)−0.02179 (7)0.56460 (13)0.0388 (3)
C130.3504 (3)−0.11301 (8)0.4760 (2)0.0604 (5)
H13A0.4669−0.11610.53460.091*
H13B0.3642−0.12830.39960.091*
H13C0.2580−0.13620.50280.091*
C140.17680 (17)0.06620 (6)0.43559 (11)0.0335 (3)
H140.20150.04210.37420.040*
C150.10419 (17)0.12684 (6)0.39869 (11)0.0335 (3)
C160.1278 (2)0.17773 (7)0.47358 (14)0.0432 (3)
H160.19680.17470.55310.052*
C170.0490 (2)0.23275 (7)0.43013 (16)0.0513 (4)
H170.06510.26630.48080.062*
C18−0.0529 (2)0.23794 (8)0.31254 (17)0.0531 (4)
H18−0.10720.27470.28440.064*
C19−0.0744 (2)0.18858 (8)0.23667 (15)0.0522 (4)
H19−0.14200.19210.15700.063*
C200.0045 (2)0.13382 (7)0.27890 (13)0.0422 (3)
H20−0.00910.10090.22660.051*
N10.81897 (15)0.02940 (6)0.92689 (10)0.0383 (3)
O10.92841 (16)0.00226 (6)0.85611 (10)0.0534 (3)
H1A1.0254−0.01010.90010.080*
O20.09792 (15)0.16043 (5)0.81645 (9)0.0468 (3)
O30.34510 (11)0.09991 (4)0.72187 (7)0.0319 (2)
O40.3345 (2)−0.04452 (6)0.66304 (12)0.0700 (4)
O50.29384 (17)−0.05077 (5)0.46293 (10)0.0503 (3)
U11U22U33U12U13U23
C10.0359 (6)0.0413 (7)0.0303 (6)0.0062 (5)0.0017 (5)−0.0023 (5)
C20.0332 (5)0.0295 (6)0.0281 (5)0.0018 (4)0.0011 (4)−0.0014 (4)
C30.0446 (7)0.0380 (7)0.0282 (6)0.0048 (5)−0.0008 (5)0.0006 (5)
C40.0565 (8)0.0434 (7)0.0256 (6)0.0044 (6)0.0067 (5)−0.0007 (5)
C50.0496 (8)0.0433 (7)0.0336 (7)0.0087 (6)0.0140 (6)−0.0007 (5)
C60.0362 (6)0.0328 (6)0.0312 (6)0.0052 (5)0.0061 (5)0.0005 (5)
C70.0319 (5)0.0292 (5)0.0247 (5)0.0005 (4)0.0038 (4)0.0003 (4)
C80.0637 (10)0.0767 (13)0.0540 (10)0.0377 (10)0.0236 (8)0.0090 (9)
C90.0768 (14)0.0746 (14)0.0834 (15)0.0377 (11)0.0253 (12)0.0154 (11)
C100.0307 (6)0.0521 (8)0.0277 (6)−0.0065 (5)0.0046 (4)−0.0026 (5)
C110.0293 (5)0.0399 (6)0.0274 (6)−0.0034 (5)0.0021 (4)−0.0004 (5)
C120.0347 (6)0.0416 (7)0.0364 (7)−0.0033 (5)0.0007 (5)0.0059 (5)
C130.0545 (9)0.0386 (8)0.0902 (14)0.0061 (7)0.0213 (9)0.0016 (8)
C140.0353 (6)0.0363 (6)0.0275 (6)0.0001 (5)0.0044 (5)−0.0028 (5)
C150.0321 (5)0.0375 (6)0.0300 (6)0.0007 (5)0.0058 (4)−0.0004 (5)
C160.0461 (7)0.0426 (8)0.0376 (7)0.0019 (6)0.0030 (6)−0.0063 (6)
C170.0570 (9)0.0411 (8)0.0550 (9)0.0062 (7)0.0117 (7)−0.0097 (7)
C180.0524 (9)0.0442 (8)0.0607 (10)0.0163 (7)0.0091 (7)0.0044 (7)
C190.0556 (9)0.0531 (9)0.0410 (8)0.0107 (7)−0.0023 (7)0.0050 (7)
C200.0507 (8)0.0405 (7)0.0318 (6)0.0032 (6)0.0023 (6)−0.0018 (5)
N10.0344 (5)0.0451 (6)0.0338 (5)0.0073 (4)0.0043 (4)−0.0037 (5)
O10.0444 (6)0.0776 (8)0.0371 (5)0.0225 (5)0.0070 (4)−0.0060 (5)
O20.0454 (5)0.0547 (6)0.0384 (5)0.0229 (5)0.0059 (4)0.0001 (4)
O30.0299 (4)0.0403 (5)0.0238 (4)−0.0013 (3)0.0032 (3)0.0005 (3)
O40.0975 (11)0.0573 (8)0.0452 (7)0.0093 (7)−0.0035 (7)0.0172 (6)
O50.0609 (7)0.0410 (6)0.0482 (6)0.0104 (5)0.0109 (5)0.0010 (5)
C1—N11.2723 (16)C10—H10B0.9700
C1—C21.4627 (18)C11—C141.3429 (18)
C1—H10.9300C11—C121.487 (2)
C2—C71.3947 (16)C12—O41.2014 (17)
C2—C31.4051 (18)C12—O51.3324 (19)
C3—C41.371 (2)C13—O51.436 (2)
C3—H30.9300C13—H13A0.9600
C4—C51.385 (2)C13—H13B0.9600
C4—H40.9300C13—H13C0.9600
C5—C61.3866 (19)C14—C151.4687 (18)
C5—H50.9300C14—H140.9300
C6—O21.3650 (15)C15—C201.3970 (18)
C6—C71.4029 (17)C15—C161.3971 (19)
C7—O31.3774 (14)C16—C171.389 (2)
C8—O21.4382 (19)C16—H160.9300
C8—C91.494 (3)C17—C181.377 (2)
C8—H8A0.9700C17—H170.9300
C8—H8B0.9700C18—C191.377 (2)
C9—H9A0.9600C18—H180.9300
C9—H9B0.9600C19—C201.381 (2)
C9—H9C0.9600C19—H190.9300
C10—O31.4536 (15)C20—H200.9300
C10—C111.4957 (18)N1—O11.4034 (15)
C10—H10A0.9700O1—H1A0.8200
N1—C1—C2120.86 (12)C14—C11—C12120.50 (12)
N1—C1—H1119.6C14—C11—C10125.14 (13)
C2—C1—H1119.6C12—C11—C10114.32 (11)
C7—C2—C3118.81 (12)O4—C12—O5123.03 (15)
C7—C2—C1119.08 (11)O4—C12—C11122.64 (15)
C3—C2—C1122.11 (11)O5—C12—C11114.32 (12)
C4—C3—C2120.40 (12)O5—C13—H13A109.5
C4—C3—H3119.8O5—C13—H13B109.5
C2—C3—H3119.8H13A—C13—H13B109.5
C3—C4—C5120.89 (12)O5—C13—H13C109.5
C3—C4—H4119.6H13A—C13—H13C109.5
C5—C4—H4119.6H13B—C13—H13C109.5
C4—C5—C6119.84 (13)C11—C14—C15128.85 (12)
C4—C5—H5120.1C11—C14—H14115.6
C6—C5—H5120.1C15—C14—H14115.6
O2—C6—C5125.00 (12)C20—C15—C16117.84 (13)
O2—C6—C7115.26 (11)C20—C15—C14116.97 (12)
C5—C6—C7119.70 (12)C16—C15—C14125.18 (12)
O3—C7—C2119.05 (11)C17—C16—C15120.45 (14)
O3—C7—C6120.55 (10)C17—C16—H16119.8
C2—C7—C6120.27 (11)C15—C16—H16119.8
O2—C8—C9107.33 (15)C18—C17—C16120.46 (15)
O2—C8—H8A110.2C18—C17—H17119.8
C9—C8—H8A110.2C16—C17—H17119.8
O2—C8—H8B110.2C17—C18—C19119.90 (15)
C9—C8—H8B110.2C17—C18—H18120.1
H8A—C8—H8B108.5C19—C18—H18120.1
C8—C9—H9A109.5C18—C19—C20120.01 (15)
C8—C9—H9B109.5C18—C19—H19120.0
H9A—C9—H9B109.5C20—C19—H19120.0
C8—C9—H9C109.5C19—C20—C15121.30 (14)
H9A—C9—H9C109.5C19—C20—H20119.4
H9B—C9—H9C109.5C15—C20—H20119.4
O3—C10—C11108.81 (10)C1—N1—O1112.01 (11)
O3—C10—H10A109.9N1—O1—H1A109.5
C11—C10—H10A109.9C6—O2—C8117.90 (12)
O3—C10—H10B109.9C7—O3—C10114.80 (9)
C11—C10—H10B109.9C12—O5—C13116.09 (14)
H10A—C10—H10B108.3
N1—C1—C2—C7172.39 (13)C12—C11—C14—C15−179.71 (12)
N1—C1—C2—C3−7.6 (2)C10—C11—C14—C152.7 (2)
C7—C2—C3—C40.3 (2)C11—C14—C15—C20−152.45 (14)
C1—C2—C3—C4−179.74 (14)C11—C14—C15—C1627.8 (2)
C2—C3—C4—C5−1.8 (2)C20—C15—C16—C171.9 (2)
C3—C4—C5—C60.5 (2)C14—C15—C16—C17−178.35 (14)
C4—C5—C6—O2−175.45 (14)C15—C16—C17—C18−0.2 (3)
C4—C5—C6—C72.2 (2)C16—C17—C18—C19−1.1 (3)
C3—C2—C7—O3178.30 (11)C17—C18—C19—C200.7 (3)
C1—C2—C7—O3−1.65 (18)C18—C19—C20—C151.1 (3)
C3—C2—C7—C62.38 (19)C16—C15—C20—C19−2.4 (2)
C1—C2—C7—C6−177.57 (12)C14—C15—C20—C19177.90 (15)
O2—C6—C7—O3−1.64 (18)C2—C1—N1—O1179.96 (12)
C5—C6—C7—O3−179.51 (12)C5—C6—O2—C814.9 (2)
O2—C6—C7—C2174.22 (12)C7—C6—O2—C8−162.82 (15)
C5—C6—C7—C2−3.7 (2)C9—C8—O2—C6156.80 (17)
O3—C10—C11—C14−93.89 (15)C2—C7—O3—C10122.08 (13)
O3—C10—C11—C1288.35 (13)C6—C7—O3—C10−62.01 (15)
C14—C11—C12—O4174.10 (15)C11—C10—O3—C7−149.29 (11)
C10—C11—C12—O4−8.0 (2)O4—C12—O5—C133.8 (2)
C14—C11—C12—O5−7.17 (18)C11—C12—O5—C13−174.95 (13)
C10—C11—C12—O5170.71 (11)
D—H···AD—HH···AD···AD—H···A
O1—H1A···N1i0.822.082.8121 (15)149
C4—H4···O4ii0.932.593.2379 (18)127
C20—H20···O1iii0.932.593.466 (2)157
C9—H9B···Cg2iv0.962.793.616 (2)145
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C15–C20 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯N1i0.822.082.8121 (15)149
C4—H4⋯O4ii0.932.593.2379 (18)127
C20—H20⋯O1iii0.932.593.466 (2)157
C9—H9BCg2iv0.962.793.616 (2)145

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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6.  (E)-Methyl 3-(4-chloro-phen-yl)-2-{2-[(E)-(hy-droxy-imino)-meth-yl]phen-oxy-meth-yl}acrylate.

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