Literature DB >> 22590257

2-[7-Chloro-1,1-dioxo-2-(2,4,5-trifluoro-benz-yl)-3,4-dihydro-2H-1,2,4-benzothia-diazin-4-yl]acetic acid.

Yanchun Yang, Yuhua Guo, Changjin Zhu.   

Abstract

In the mol-ecule of the title compound, C(16)H(12)ClF(3)N(2)O(4)S, the thia-diazine ring adopts a half-chair conformation. The dihedral angle between the benzene ring of the benzothia-diazine ring system and trifluoro-phenyl group is 15.02 (7)°. In the crystal, centrosymmetrically related mol-ecules are linked into dimers via pairs of O-H⋯O hydrogen bonds, generating R(2) (2)(8) ring motifs. The dimers are further connected into a three-dimensional network by C-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22590257      PMCID: PMC3344495          DOI: 10.1107/S1600536812014468

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological properties of benzothia­diazine derivatives, see: Longman & Hamilton (1992 ▶); Buckheit et al. (1994 ▶); Yamada & Tang (1993 ▶); Phillips et al. (2002 ▶); Braghiroli et al. (2002 ▶); Pirotte et al. (1998 ▶); Francotte et al. (2007 ▶). For the biological properties and synthetic details of the title compound, see: Chen et al. (2010 ▶).

Experimental

Crystal data

C16H12ClF3N2O4S M = 420.79 Monoclinic, a = 9.3628 (2) Å b = 12.3134 (2) Å c = 15.5597 (3) Å β = 105.996 (1)° V = 1724.39 (6) Å3 Z = 4 Mo Kα radiation μ = 0.40 mm−1 T = 296 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer 15140 measured reflections 4293 independent reflections 3302 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.131 S = 1.04 4293 reflections 245 parameters H-atom parameters constrained Δρmax = 0.73 e Å−3 Δρmin = −0.82 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812014468/rz2722sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014468/rz2722Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812014468/rz2722Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12ClF3N2O4SF(000) = 856
Mr = 420.79Dx = 1.621 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4599 reflections
a = 9.3628 (2) Åθ = 2.8–28.3°
b = 12.3134 (2) ŵ = 0.40 mm1
c = 15.5597 (3) ÅT = 296 K
β = 105.996 (1)°Block, colourless
V = 1724.39 (6) Å30.20 × 0.20 × 0.20 mm
Z = 4
Bruker APEXII CCD diffractometer3302 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.027
Graphite monochromatorθmax = 28.3°, θmin = 2.1°
φ and ω scansh = −12→12
15140 measured reflectionsk = −16→15
4293 independent reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.131H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0571P)2 + 1.0199P] where P = (Fo2 + 2Fc2)/3
4293 reflections(Δ/σ)max < 0.001
245 parametersΔρmax = 0.73 e Å3
0 restraintsΔρmin = −0.82 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.45256 (6)0.88685 (5)0.08722 (3)0.04077 (16)
Cl1−0.00328 (10)0.62773 (8)0.09172 (6)0.0872 (3)
C110.8849 (2)0.89923 (18)0.16523 (14)0.0394 (5)
C50.3729 (2)0.79827 (17)0.14930 (12)0.0350 (4)
N20.62050 (19)0.90503 (15)0.15259 (11)0.0387 (4)
F21.26561 (18)1.08588 (15)0.23239 (13)0.0768 (5)
O10.46125 (19)0.83390 (17)0.00742 (10)0.0607 (5)
F31.0586 (2)1.12091 (14)0.07690 (12)0.0729 (5)
C120.9947 (3)0.88393 (19)0.24347 (15)0.0458 (5)
C60.2388 (2)0.75123 (19)0.10327 (14)0.0449 (5)
H60.19850.76480.04260.054*
N10.5746 (2)0.82433 (15)0.28393 (11)0.0392 (4)
F10.97529 (19)0.80656 (14)0.30117 (11)0.0714 (5)
O20.37472 (19)0.98763 (15)0.07985 (13)0.0597 (5)
C40.4382 (2)0.77835 (16)0.24064 (12)0.0341 (4)
C70.6157 (2)0.92240 (18)0.24459 (13)0.0400 (5)
H7A0.71260.94660.28020.048*
H7B0.54450.97920.24560.048*
C30.3601 (3)0.70893 (18)0.28347 (14)0.0435 (5)
H30.39960.69320.34380.052*
C20.2264 (3)0.66393 (19)0.23789 (16)0.0484 (5)
H20.17610.61920.26790.058*
C10.1662 (3)0.6843 (2)0.14823 (16)0.0489 (5)
C90.5751 (3)0.8936 (2)0.43292 (13)0.0447 (5)
C80.6382 (3)0.8131 (2)0.37949 (13)0.0462 (5)
H8A0.74490.82320.39350.055*
H8B0.62000.74000.39720.055*
C190.7430 (2)0.8351 (2)0.14144 (16)0.0468 (5)
H19A0.72130.81020.08000.056*
H19B0.75310.77200.18000.056*
C160.9087 (2)0.98074 (19)0.10813 (15)0.0442 (5)
H160.83760.99390.05420.053*
C151.0367 (3)1.0414 (2)0.13140 (16)0.0482 (5)
C141.1431 (3)1.0230 (2)0.21047 (18)0.0506 (6)
C131.1245 (3)0.9440 (2)0.26747 (17)0.0527 (6)
H131.19680.93070.32090.063*
O40.6474 (2)0.89659 (17)0.51717 (10)0.0651 (6)
H40.60530.93800.54350.098*
O30.4682 (2)0.95079 (17)0.39943 (11)0.0645 (6)
U11U22U33U12U13U23
S10.0349 (3)0.0559 (3)0.0303 (2)−0.0079 (2)0.00703 (18)0.0092 (2)
Cl10.0666 (5)0.1026 (7)0.0868 (6)−0.0466 (5)0.0117 (4)0.0042 (5)
C110.0321 (10)0.0454 (12)0.0418 (11)0.0012 (9)0.0122 (8)−0.0088 (9)
C50.0337 (10)0.0405 (11)0.0317 (9)−0.0010 (8)0.0107 (7)0.0047 (8)
N20.0305 (8)0.0499 (10)0.0360 (8)−0.0045 (7)0.0095 (7)−0.0032 (7)
F20.0449 (9)0.0762 (11)0.1085 (14)−0.0195 (8)0.0196 (9)−0.0269 (10)
O10.0554 (10)0.0992 (15)0.0291 (7)−0.0253 (10)0.0143 (7)−0.0050 (8)
F30.0804 (12)0.0682 (11)0.0810 (11)−0.0100 (9)0.0403 (10)0.0087 (8)
C120.0422 (12)0.0479 (13)0.0464 (12)0.0040 (10)0.0108 (9)0.0000 (10)
C60.0404 (12)0.0546 (14)0.0376 (10)−0.0088 (10)0.0072 (9)0.0050 (9)
N10.0435 (10)0.0441 (10)0.0272 (8)0.0020 (8)0.0052 (7)−0.0012 (7)
F10.0715 (11)0.0740 (11)0.0638 (10)0.0000 (9)0.0101 (8)0.0207 (8)
O20.0453 (10)0.0598 (11)0.0706 (11)0.0027 (8)0.0101 (8)0.0289 (9)
C40.0403 (11)0.0337 (10)0.0292 (9)0.0057 (8)0.0110 (8)0.0000 (7)
C70.0384 (11)0.0444 (12)0.0362 (10)−0.0029 (9)0.0084 (8)−0.0067 (8)
C30.0597 (14)0.0408 (12)0.0341 (10)0.0057 (10)0.0195 (9)0.0073 (8)
C20.0582 (14)0.0397 (12)0.0555 (13)−0.0028 (11)0.0295 (11)0.0075 (10)
C10.0440 (13)0.0486 (13)0.0552 (13)−0.0125 (10)0.0154 (10)0.0009 (10)
C90.0438 (12)0.0551 (14)0.0305 (9)0.0077 (10)0.0025 (8)−0.0027 (9)
C80.0468 (12)0.0566 (14)0.0310 (10)0.0132 (11)0.0036 (8)−0.0007 (9)
C190.0383 (12)0.0501 (13)0.0527 (13)−0.0044 (10)0.0138 (9)−0.0133 (10)
C160.0386 (11)0.0549 (14)0.0402 (11)0.0035 (10)0.0124 (9)−0.0059 (9)
C150.0477 (13)0.0486 (13)0.0544 (13)0.0009 (10)0.0243 (11)−0.0043 (10)
C140.0335 (11)0.0531 (14)0.0666 (15)−0.0051 (10)0.0160 (10)−0.0196 (12)
C130.0352 (12)0.0634 (16)0.0525 (13)0.0073 (11)0.0005 (9)−0.0104 (12)
O40.0648 (12)0.0852 (14)0.0333 (8)0.0296 (10)−0.0066 (8)−0.0137 (8)
O30.0606 (11)0.0843 (14)0.0379 (8)0.0325 (10)−0.0042 (7)−0.0133 (8)
S1—O11.4245 (17)C4—C31.407 (3)
S1—O21.4277 (19)C7—H7A0.9700
S1—N21.6357 (18)C7—H7B0.9700
S1—C51.7540 (19)C3—C21.374 (3)
Cl1—C11.734 (2)C3—H30.9300
C11—C121.373 (3)C2—C11.376 (3)
C11—C161.398 (3)C2—H20.9300
C11—C191.502 (3)C9—O31.217 (3)
C5—C61.389 (3)C9—O41.300 (2)
C5—C41.405 (3)C9—C81.514 (3)
N2—C71.460 (2)C8—H8A0.9700
N2—C191.482 (3)C8—H8B0.9700
F2—C141.347 (3)C19—H19A0.9700
F3—C151.347 (3)C19—H19B0.9700
C12—F11.355 (3)C16—C151.374 (3)
C12—C131.383 (3)C16—H160.9300
C6—C11.376 (3)C15—C141.372 (4)
C6—H60.9300C14—C131.360 (4)
N1—C41.389 (3)C13—H130.9300
N1—C81.448 (2)O4—H40.8200
N1—C71.453 (3)
O1—S1—O2118.58 (12)C4—C3—H3119.4
O1—S1—N2109.19 (10)C3—C2—C1120.7 (2)
O2—S1—N2108.23 (11)C3—C2—H2119.7
O1—S1—C5109.30 (11)C1—C2—H2119.7
O2—S1—C5107.43 (10)C6—C1—C2120.2 (2)
N2—S1—C5102.98 (9)C6—C1—Cl1119.63 (19)
C12—C11—C16116.8 (2)C2—C1—Cl1120.18 (18)
C12—C11—C19122.8 (2)O3—C9—O4123.6 (2)
C16—C11—C19120.4 (2)O3—C9—C8122.87 (19)
C6—C5—C4121.91 (19)O4—C9—C8113.50 (19)
C6—C5—S1115.88 (15)N1—C8—C9112.90 (18)
C4—C5—S1122.18 (16)N1—C8—H8A109.0
C7—N2—C19115.69 (18)C9—C8—H8A109.0
C7—N2—S1110.23 (13)N1—C8—H8B109.0
C19—N2—S1119.35 (14)C9—C8—H8B109.0
F1—C12—C11118.7 (2)H8A—C8—H8B107.8
F1—C12—C13117.7 (2)N2—C19—C11109.07 (18)
C11—C12—C13123.6 (2)N2—C19—H19A109.9
C1—C6—C5119.4 (2)C11—C19—H19A109.9
C1—C6—H6120.3N2—C19—H19B109.9
C5—C6—H6120.3C11—C19—H19B109.9
C4—N1—C8121.46 (18)H19A—C19—H19B108.3
C4—N1—C7116.70 (16)C15—C16—C11120.2 (2)
C8—N1—C7115.48 (18)C15—C16—H16119.9
N1—C4—C5120.34 (18)C11—C16—H16119.9
N1—C4—C3123.12 (18)F3—C15—C14119.1 (2)
C5—C4—C3116.53 (19)F3—C15—C16120.2 (2)
N1—C7—N2112.00 (17)C14—C15—C16120.8 (2)
N1—C7—H7A109.2F2—C14—C13120.0 (2)
N2—C7—H7A109.2F2—C14—C15119.3 (2)
N1—C7—H7B109.2C13—C14—C15120.7 (2)
N2—C7—H7B109.2C14—C13—C12117.9 (2)
H7A—C7—H7B107.9C14—C13—H13121.1
C2—C3—C4121.29 (19)C12—C13—H13121.1
C2—C3—H3119.4C9—O4—H4109.5
D—H···AD—HH···AD···AD—H···A
O4—H4···O3i0.821.862.676 (2)171
C3—H3···O1ii0.932.473.391 (3)169
C16—H16···O2iii0.932.463.387 (2)172
C13—H13···O3iv0.932.513.307 (3)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O3i0.821.862.676 (2)171
C3—H3⋯O1ii0.932.473.391 (3)169
C16—H16⋯O2iii0.932.463.387 (2)172
C13—H13⋯O3iv0.932.513.307 (3)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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