Literature DB >> 22590250

2-{[5-(Adamantan-1-yl)-4-methyl-4H-1,2,4-triazol-3-yl]sulfan-yl}-N,N-dimethyl-ethanamine.

Ali A El-Emam, Siham Lahsasni, Hanadi H Asiri, Ching Kheng Quah, Hoong-Kun Fun.   

Abstract

In the title compound, C(17)H(28)N(4)S, the 1,2,4-triazole ring is nearly planar [maximum deviation = 0.005 (2) Å]. There are no significant hydrogen bonds observed in the crystal structure. The crystal studied was a non-merohedral twin, the refined ratio of twin components being 0.281 (3):0.719 (3).

Entities:  

Year:  2012        PMID: 22590250      PMCID: PMC3344488          DOI: 10.1107/S160053681201464X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of adamantyl derivatives see: Al-Omar et al. (2010 ▶); Al-Deeb et al. (2006 ▶); El-Emam et al. (2004 ▶); Kadi et al. (2007 ▶, 2010 ▶); Vernier et al. (1969 ▶). For the structures of related adamantyl-1,2,4-triazoles, see: Almutairi et al. (2012 ▶); Al-Tamimi et al. (2010 ▶); Al-Abdullah et al. (2012 ▶). For the structures of substituted sulfanyl-1,2,4-triazoles, see: Fun et al. (2011 ▶); Wang et al. (2011 ▶). For standard bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C17H28N4S M = 320.49 Monoclinic, a = 12.5133 (7) Å b = 10.3779 (5) Å c = 14.3044 (8) Å β = 106.766 (3)° V = 1778.63 (16) Å3 Z = 4 Cu Kα radiation μ = 1.62 mm−1 T = 296 K 0.64 × 0.59 × 0.05 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.204, T max = 0.923 3267 measured reflections 3267 independent reflections 2846 reflections with I > 2σ(I)

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.184 S = 1.13 3267 reflections 203 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681201464X/rz2734sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681201464X/rz2734Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681201464X/rz2734Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H28N4SF(000) = 696
Mr = 320.49Dx = 1.197 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 3932 reflections
a = 12.5133 (7) Åθ = 7.7–69.2°
b = 10.3779 (5) ŵ = 1.62 mm1
c = 14.3044 (8) ÅT = 296 K
β = 106.766 (3)°Plate, colourless
V = 1778.63 (16) Å30.64 × 0.59 × 0.05 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3267 independent reflections
Radiation source: fine-focus sealed tube2846 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.000
φ and ω scansθmax = 69.8°, θmin = 7.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −15→14
Tmin = 0.204, Tmax = 0.923k = −12→12
3267 measured reflectionsl = 0→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.184H-atom parameters constrained
S = 1.13w = 1/[σ2(Fo2) + (0.P)2 + 1.1111P] where P = (Fo2 + 2Fc2)/3
3267 reflections(Δ/σ)max = 0.001
203 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.59451 (7)0.30472 (8)0.05471 (7)0.0589 (3)
N10.4306 (2)0.2967 (2)0.14471 (19)0.0478 (6)
N40.7649 (3)0.2967 (3)−0.0644 (2)0.0630 (7)
C90.2838 (2)0.2248 (3)0.2293 (2)0.0476 (7)
C100.3344 (3)0.2856 (4)0.3307 (3)0.0672 (9)
H10A0.39440.23150.36890.081*
H10B0.36530.36940.32340.081*
C60.2449 (4)0.3001 (5)0.3838 (3)0.0814 (12)
H6A0.27790.34020.44770.098*
C50.1995 (4)0.1692 (5)0.3976 (3)0.0893 (14)
H5A0.14410.17780.43280.107*
H5B0.25940.11490.43590.107*
C40.1465 (4)0.1071 (4)0.2985 (3)0.0765 (11)
H4A0.11690.02220.30770.092*
C30.0526 (3)0.1919 (5)0.2391 (3)0.0817 (13)
H3A0.01830.15240.17610.098*
H3B−0.00410.20110.27280.098*
C130.6508 (4)0.1620 (4)0.0134 (4)0.0803 (12)
H13A0.65600.09270.06000.096*
H13B0.60150.1344−0.04900.096*
C20.0985 (3)0.3229 (4)0.2249 (3)0.0757 (11)
H2A0.03750.37750.18690.091*
C70.1513 (4)0.3853 (5)0.3230 (4)0.0861 (13)
H7A0.09540.39770.35710.103*
H7B0.18100.46910.31360.103*
C10.1858 (3)0.3084 (4)0.1699 (3)0.0653 (9)
H1A0.21320.39270.15860.078*
H1B0.15200.26840.10690.078*
C80.2350 (3)0.0923 (3)0.2444 (3)0.0666 (9)
H8A0.20180.05210.18140.080*
H8B0.29440.03670.28170.080*
C110.3702 (2)0.2040 (3)0.1772 (2)0.0477 (7)
N20.4021 (2)0.0897 (2)0.1572 (2)0.0577 (7)
N30.4859 (3)0.1046 (3)0.1120 (2)0.0599 (7)
C120.5001 (3)0.2289 (3)0.1054 (2)0.0516 (7)
C140.7641 (4)0.1909 (5)0.0031 (4)0.0874 (14)
H14A0.81390.21240.06690.105*
H14B0.79300.1140−0.01960.105*
C160.7117 (7)0.2636 (6)−0.1633 (5)0.126 (2)
H16A0.71800.3341−0.20480.189*
H16B0.63420.2457−0.17130.189*
H16C0.74680.1886−0.18050.189*
C170.4269 (3)0.4366 (3)0.1495 (3)0.0633 (9)
H17A0.48990.47230.13300.095*
H17B0.42920.46260.21450.095*
H17C0.35930.46740.10430.095*
C150.8793 (5)0.3349 (7)−0.0500 (6)0.120 (2)
H15A0.88220.4023−0.09510.181*
H15B0.92170.2623−0.06080.181*
H15C0.91010.36550.01560.181*
U11U22U33U12U13U23
S10.0605 (5)0.0553 (5)0.0668 (6)−0.0051 (3)0.0278 (4)−0.0023 (4)
N10.0524 (14)0.0418 (13)0.0497 (15)0.0000 (10)0.0156 (11)0.0003 (10)
N40.0598 (17)0.0665 (18)0.0661 (19)0.0050 (13)0.0236 (14)0.0030 (14)
C90.0478 (15)0.0505 (16)0.0430 (16)0.0012 (12)0.0105 (13)−0.0010 (12)
C100.060 (2)0.084 (2)0.051 (2)−0.0009 (18)0.0042 (16)−0.0097 (17)
C60.076 (3)0.113 (4)0.054 (2)−0.003 (2)0.0162 (19)−0.021 (2)
C50.082 (3)0.133 (4)0.059 (3)0.012 (3)0.031 (2)0.017 (2)
C40.079 (3)0.078 (3)0.083 (3)−0.011 (2)0.039 (2)0.003 (2)
C30.056 (2)0.123 (4)0.070 (3)−0.011 (2)0.0232 (19)−0.009 (2)
C130.081 (3)0.064 (2)0.114 (4)0.0078 (19)0.056 (3)0.006 (2)
C20.057 (2)0.095 (3)0.073 (3)0.0195 (19)0.0154 (18)0.007 (2)
C70.085 (3)0.092 (3)0.091 (3)0.009 (2)0.042 (3)−0.018 (2)
C10.059 (2)0.080 (2)0.055 (2)0.0125 (16)0.0139 (16)0.0096 (17)
C80.070 (2)0.063 (2)0.072 (2)−0.0051 (16)0.0289 (18)0.0026 (17)
C110.0505 (16)0.0440 (15)0.0476 (17)0.0002 (12)0.0126 (13)0.0023 (12)
N20.0657 (16)0.0454 (14)0.0686 (18)0.0029 (12)0.0299 (14)0.0032 (12)
N30.0682 (17)0.0466 (15)0.0727 (19)0.0041 (12)0.0327 (15)0.0027 (12)
C120.0531 (17)0.0499 (17)0.0499 (18)0.0020 (13)0.0118 (14)0.0008 (13)
C140.080 (3)0.094 (3)0.096 (3)0.024 (2)0.038 (3)0.024 (3)
C160.181 (6)0.097 (4)0.082 (4)0.030 (4)0.008 (4)−0.013 (3)
C170.069 (2)0.0442 (17)0.080 (2)−0.0017 (15)0.0273 (18)−0.0028 (15)
C150.082 (3)0.137 (5)0.151 (6)0.003 (3)0.047 (4)0.032 (4)
S1—C121.742 (3)C13—C141.498 (6)
S1—C131.811 (4)C13—H13A0.9700
N1—C121.361 (4)C13—H13B0.9700
N1—C111.384 (4)C2—C71.513 (7)
N1—C171.455 (4)C2—C11.527 (5)
N4—C161.421 (7)C2—H2A0.9800
N4—C151.441 (6)C7—H7A0.9700
N4—C141.464 (5)C7—H7B0.9700
C9—C111.495 (4)C1—H1A0.9700
C9—C101.539 (5)C1—H1B0.9700
C9—C11.542 (4)C8—H8A0.9700
C9—C81.546 (5)C8—H8B0.9700
C10—C61.531 (6)C11—N21.310 (4)
C10—H10A0.9700N2—N31.390 (4)
C10—H10B0.9700N3—C121.309 (4)
C6—C51.508 (7)C14—H14A0.9700
C6—C71.524 (7)C14—H14B0.9700
C6—H6A0.9800C16—H16A0.9600
C5—C41.524 (7)C16—H16B0.9600
C5—H5A0.9700C16—H16C0.9600
C5—H5B0.9700C17—H17A0.9600
C4—C31.517 (7)C17—H17B0.9600
C4—C81.531 (5)C17—H17C0.9600
C4—H4A0.9800C15—H15A0.9600
C3—C21.513 (7)C15—H15B0.9600
C3—H3A0.9700C15—H15C0.9600
C3—H3B0.9700
C12—S1—C1398.05 (17)C7—C2—H2A109.2
C12—N1—C11104.8 (2)C1—C2—H2A109.2
C12—N1—C17124.6 (3)C2—C7—C6109.8 (4)
C11—N1—C17130.5 (3)C2—C7—H7A109.7
C16—N4—C15111.7 (5)C6—C7—H7A109.7
C16—N4—C14112.6 (4)C2—C7—H7B109.7
C15—N4—C14107.9 (4)C6—C7—H7B109.7
C11—C9—C10111.7 (3)H7A—C7—H7B108.2
C11—C9—C1112.4 (3)C2—C1—C9110.2 (3)
C10—C9—C1109.5 (3)C2—C1—H1A109.6
C11—C9—C8108.2 (3)C9—C1—H1A109.6
C10—C9—C8107.7 (3)C2—C1—H1B109.6
C1—C9—C8107.1 (3)C9—C1—H1B109.6
C6—C10—C9110.3 (3)H1A—C1—H1B108.1
C6—C10—H10A109.6C4—C8—C9110.7 (3)
C9—C10—H10A109.6C4—C8—H8A109.5
C6—C10—H10B109.6C9—C8—H8A109.5
C9—C10—H10B109.6C4—C8—H8B109.5
H10A—C10—H10B108.1C9—C8—H8B109.5
C5—C6—C7109.9 (4)H8A—C8—H8B108.1
C5—C6—C10109.5 (4)N2—C11—N1109.0 (3)
C7—C6—C10109.0 (4)N2—C11—C9123.3 (3)
C5—C6—H6A109.5N1—C11—C9127.6 (3)
C7—C6—H6A109.5C11—N2—N3108.6 (3)
C10—C6—H6A109.5C12—N3—N2106.3 (3)
C6—C5—C4109.8 (3)N3—C12—N1111.2 (3)
C6—C5—H5A109.7N3—C12—S1126.8 (3)
C4—C5—H5A109.7N1—C12—S1122.0 (2)
C6—C5—H5B109.7N4—C14—C13113.7 (4)
C4—C5—H5B109.7N4—C14—H14A108.8
H5A—C5—H5B108.2C13—C14—H14A108.8
C3—C4—C5109.5 (4)N4—C14—H14B108.8
C3—C4—C8109.4 (4)C13—C14—H14B108.8
C5—C4—C8109.2 (4)H14A—C14—H14B107.7
C3—C4—H4A109.6N4—C16—H16A109.5
C5—C4—H4A109.6N4—C16—H16B109.5
C8—C4—H4A109.6H16A—C16—H16B109.5
C2—C3—C4109.5 (3)N4—C16—H16C109.5
C2—C3—H3A109.8H16A—C16—H16C109.5
C4—C3—H3A109.8H16B—C16—H16C109.5
C2—C3—H3B109.8N1—C17—H17A109.5
C4—C3—H3B109.8N1—C17—H17B109.5
H3A—C3—H3B108.2H17A—C17—H17B109.5
C14—C13—S1109.7 (3)N1—C17—H17C109.5
C14—C13—H13A109.7H17A—C17—H17C109.5
S1—C13—H13A109.7H17B—C17—H17C109.5
C14—C13—H13B109.7N4—C15—H15A109.5
S1—C13—H13B109.7N4—C15—H15B109.5
H13A—C13—H13B108.2H15A—C15—H15B109.5
C3—C2—C7110.0 (4)N4—C15—H15C109.5
C3—C2—C1109.7 (4)H15A—C15—H15C109.5
C7—C2—C1109.6 (3)H15B—C15—H15C109.5
C3—C2—H2A109.2
C11—C9—C10—C6−177.5 (3)C10—C9—C8—C458.6 (4)
C1—C9—C10—C657.3 (4)C1—C9—C8—C4−59.2 (4)
C8—C9—C10—C6−58.8 (4)C12—N1—C11—N2−0.5 (4)
C9—C10—C6—C560.9 (4)C17—N1—C11—N2−179.8 (3)
C9—C10—C6—C7−59.3 (5)C12—N1—C11—C9178.0 (3)
C7—C6—C5—C458.9 (5)C17—N1—C11—C9−1.3 (5)
C10—C6—C5—C4−60.8 (5)C10—C9—C11—N2113.2 (4)
C6—C5—C4—C3−59.6 (5)C1—C9—C11—N2−123.3 (4)
C6—C5—C4—C860.2 (5)C8—C9—C11—N2−5.3 (4)
C5—C4—C3—C259.8 (5)C10—C9—C11—N1−65.1 (4)
C8—C4—C3—C2−59.8 (5)C1—C9—C11—N158.4 (4)
C12—S1—C13—C14−157.1 (3)C8—C9—C11—N1176.4 (3)
C4—C3—C2—C7−59.9 (5)N1—C11—N2—N30.8 (4)
C4—C3—C2—C160.7 (4)C9—C11—N2—N3−177.8 (3)
C3—C2—C7—C659.1 (5)C11—N2—N3—C12−0.8 (4)
C1—C2—C7—C6−61.6 (5)N2—N3—C12—N10.5 (4)
C5—C6—C7—C2−58.6 (5)N2—N3—C12—S1−179.9 (3)
C10—C6—C7—C261.3 (5)C11—N1—C12—N3−0.1 (4)
C3—C2—C1—C9−61.4 (4)C17—N1—C12—N3179.3 (3)
C7—C2—C1—C959.4 (5)C11—N1—C12—S1−179.7 (2)
C11—C9—C1—C2178.2 (3)C17—N1—C12—S1−0.3 (5)
C10—C9—C1—C2−57.1 (4)C13—S1—C12—N33.1 (4)
C8—C9—C1—C259.5 (4)C13—S1—C12—N1−177.3 (3)
C3—C4—C8—C960.2 (5)C16—N4—C14—C13−69.9 (6)
C5—C4—C8—C9−59.7 (5)C15—N4—C14—C13166.4 (5)
C11—C9—C8—C4179.4 (3)S1—C13—C14—N4−58.1 (5)
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Journal:  Toxicol Appl Pharmacol       Date:  1969-11       Impact factor: 4.219

3.  Synthesis, antimicrobial and anti-inflammatory activities of novel 5-(1-adamantyl)-1,3,4-thiadiazole derivatives.

Authors:  Adnan A Kadi; Ebtehal S Al-Abdullah; Ihsan A Shehata; Elsayed E Habib; Tarek M Ibrahim; Ali A El-Emam
Journal:  Eur J Med Chem       Date:  2010-08-12       Impact factor: 6.514

4.  Synthesis, antimicrobial, and anti-HIV-1 activity of certain 5-(1-adamantyl)-2-substituted thio-1,3,4-oxadiazoles and 5-(1-adamantyl)-3-substituted aminomethyl-1,3,4-oxadiazoline-2-thiones.

Authors:  Ali A El-Emam; Omar A Al-Deeb; Mohamed Al-Omar; Jochen Lehmann
Journal:  Bioorg Med Chem       Date:  2004-10-01       Impact factor: 3.641

5.  4-(3-Chloro-phen-yl)-3-[(2,6-difluoro-benz-yl)sulfan-yl]-5-(3,4,5-trimeth-oxy-phen-yl)-4H-1,2,4-triazole.

Authors:  Hoong-Kun Fun; Safra Izuani Jama Asik; B Chandrakantha; Arun M Isloor; Prakash Shetty
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-25

6.  3-(Adamantan-1-yl)-4-(prop-2-en-1-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Maha S Almutairi; Mona M Al-Shehri; Ali A El-Emam; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10

7.  2-[(3-Propyl-sulfanyl-5-p-tolyl-4H-1,2,4-triazol-4-yl)imino-meth-yl]phenol.

Authors:  Wei Wang; Qing-Lei Liu; Chao Xu; Wen-Peng Wu; Yan Gao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-02

8.  3-(Adamantan-1-yl)-1-[(4-benzyl-piperazin-1-yl)meth-yl]-4-phenyl-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Ebtehal S Al-Abdullah; Hanadi H Asiri; Ali El-Emam; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11

9.  Synthesis, antimicrobial, and anti-inflammatory activities of novel 5-(1-adamantyl)-4-arylideneamino-3-mercapto-1,2,4-triazoles and related derivatives.

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Journal:  Molecules       Date:  2010-04-09       Impact factor: 4.411

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  3 in total

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-04

2.  5-(Adamantan-1-yl)-3-(benzyl-sulfan-yl)-4-methyl-4H-1,2,4-triazole.

Authors:  Ebtehal S Al-Abdullah; Ali A El-Emam; Hazem A Ghabbour; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-10

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Authors:  Ebtehal S Al-Abdullah; Hanadi H Asiri; Siham Lahsasni; Elsayed E Habib; Tarek M Ibrahim; Ali A El-Emam
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  3 in total

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