Literature DB >> 22590231

2-(5-Amino-2H-tetra-zol-2-yl)acetic acid.

Guo-Chun Zhang, Cheng-Fang Qiao, Chun-Sheng Zhou, Zheng-Qiang Xia.   

Abstract

In the title mol-ecule, C(3)H(5)N(5)O(2), the tetra-zole ring and carboxyl group form a dihedral angle of 82.25 (14)°. In the crystal, adjacent mol-ecules are linked through O-H⋯N, N-H⋯O and N-H⋯N hydrogen bonds into layers parallel to the bc plane.

Entities:  

Year:  2012        PMID: 22590231      PMCID: PMC3344469          DOI: 10.1107/S1600536812014389

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to tetra­zole compounds, see: Zhao et al. (2008 ▶). For the use of 5-amino­tetra­zole-1-acetic acid in coord­ination chemistry, see: Li et al. (2010 ▶); Shen et al. (2011 ▶); Yang et al. (2008 ▶). For the crystal structures of similar compounds, see: Bryden (1956 ▶); Klapötke et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C3H5N5O2 M = 143.12 Monoclinic, a = 18.381 (4) Å b = 4.4429 (9) Å c = 14.846 (3) Å β = 90.850 (3)° V = 1212.2 (4) Å3 Z = 8 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.28 × 0.19 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.970, T max = 0.980 3040 measured reflections 1193 independent reflections 890 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.124 S = 1.03 1193 reflections 92 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812014389/cv5277sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014389/cv5277Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812014389/cv5277Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H5N5O2F(000) = 592
Mr = 143.12Dx = 1.568 Mg m3Dm = 1.568 Mg m3Dm measured by not measured
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 734 reflections
a = 18.381 (4) Åθ = 3.5–22.2°
b = 4.4429 (9) ŵ = 0.13 mm1
c = 14.846 (3) ÅT = 296 K
β = 90.850 (3)°Block, colourless
V = 1212.2 (4) Å30.28 × 0.19 × 0.15 mm
Z = 8
Bruker APEXII CCD diffractometer1193 independent reflections
Radiation source: fine-focus sealed tube890 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
φ and ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −22→22
Tmin = 0.970, Tmax = 0.980k = −5→4
3040 measured reflectionsl = −13→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0657P)2 + 0.3572P] where P = (Fo2 + 2Fc2)/3
1193 reflections(Δ/σ)max = 0.002
92 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.17856 (8)0.1746 (3)0.30324 (8)0.0527 (4)
H20.16260.26440.34700.079*
N20.18104 (10)0.4658 (4)0.01590 (11)0.0493 (5)
N30.15090 (8)0.2586 (4)0.06465 (10)0.0414 (4)
C30.14844 (11)0.2824 (5)0.22938 (12)0.0426 (5)
N40.08911 (9)0.1468 (4)0.03036 (11)0.0485 (5)
N10.13778 (10)0.4994 (4)−0.05556 (11)0.0500 (5)
C20.18346 (11)0.1507 (5)0.14771 (12)0.0449 (5)
H2A0.23480.20100.14870.054*
H2B0.1793−0.06680.14990.054*
O10.10122 (10)0.4680 (4)0.22631 (10)0.0752 (6)
C10.08229 (11)0.3035 (5)−0.04569 (13)0.0479 (5)
N50.02757 (11)0.2722 (6)−0.10567 (13)0.0787 (8)
H5A−0.00640.1434−0.09620.094*
H5B0.02640.3809−0.15360.094*
U11U22U33U12U13U23
O20.0661 (10)0.0609 (10)0.0308 (8)0.0097 (8)−0.0064 (6)−0.0009 (6)
N20.0611 (10)0.0547 (11)0.0320 (9)−0.0062 (9)−0.0015 (7)0.0015 (7)
N30.0464 (9)0.0479 (10)0.0300 (8)0.0011 (7)0.0009 (7)−0.0019 (7)
C30.0479 (11)0.0467 (12)0.0329 (10)0.0005 (10)−0.0036 (8)−0.0002 (8)
N40.0490 (9)0.0622 (11)0.0341 (9)−0.0039 (8)−0.0029 (7)0.0042 (8)
N10.0604 (11)0.0588 (12)0.0309 (9)−0.0029 (9)−0.0027 (7)0.0027 (7)
C20.0506 (11)0.0502 (12)0.0337 (10)0.0068 (10)−0.0047 (8)0.0013 (8)
O10.0878 (12)0.0979 (14)0.0398 (9)0.0459 (11)−0.0038 (8)−0.0048 (8)
C10.0483 (11)0.0651 (14)0.0303 (10)0.0030 (10)0.0015 (8)0.0015 (9)
N50.0607 (12)0.125 (2)0.0503 (12)−0.0216 (12)−0.0165 (9)0.0320 (12)
O2—C31.312 (2)N4—C11.331 (3)
O2—H20.8200N1—C11.351 (3)
N2—N31.300 (2)C2—H2A0.9700
N2—N11.325 (2)C2—H2B0.9700
N3—N41.334 (2)C1—N51.341 (2)
N3—C21.444 (2)N5—H5A0.8600
C3—O11.198 (2)N5—H5B0.8600
C3—C21.500 (3)
C3—O2—H2109.5N3—C2—H2A109.1
N3—N2—N1105.66 (16)C3—C2—H2A109.1
N2—N3—N4114.75 (16)N3—C2—H2B109.1
N2—N3—C2122.39 (16)C3—C2—H2B109.1
N4—N3—C2122.81 (17)H2A—C2—H2B107.8
O1—C3—O2125.45 (18)N4—C1—N5124.7 (2)
O1—C3—C2123.87 (18)N4—C1—N1111.56 (17)
O2—C3—C2110.64 (17)N5—C1—N1123.72 (19)
C1—N4—N3101.42 (17)C1—N5—H5A120.0
N2—N1—C1106.60 (16)C1—N5—H5B120.0
N3—C2—C3112.53 (16)H5A—N5—H5B120.0
N1—N2—N3—N40.2 (2)O1—C3—C2—N3−3.6 (3)
N1—N2—N3—C2177.93 (17)O2—C3—C2—N3178.80 (17)
N2—N3—N4—C1−0.1 (2)N3—N4—C1—N5179.7 (2)
C2—N3—N4—C1−177.82 (17)N3—N4—C1—N10.0 (2)
N3—N2—N1—C1−0.2 (2)N2—N1—C1—N40.2 (2)
N2—N3—C2—C3101.8 (2)N2—N1—C1—N5−179.6 (2)
N4—N3—C2—C3−80.6 (2)
D—H···AD—HH···AD···AD—H···A
N5—H5B···O1i0.862.363.080 (3)141
N5—H5A···N4ii0.862.233.064 (3)163
O2—H2···N1iii0.821.852.665 (2)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N5—H5B⋯O1i0.862.363.080 (3)141
N5—H5A⋯N4ii0.862.233.064 (3)163
O2—H2⋯N1iii0.821.852.665 (2)172

Symmetry codes: (i) ; (ii) ; (iii) .

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