Literature DB >> 22590180

Bis(3-acetyl-pyridine-κN)diaqua-bis-(seleno-cyanato-κN)cobalt(II).

Julia Werner1, Jan Boeckmann, Inke Jess, Christian Näther.   

Abstract

In the crystal structure of the title compound, [Co(NCSe)(2)(C(7)H(n class="Chemical">7)NO)(2)(H(2)O)(2)], the Co(2+) cation is coordinated by two seleno-cyanate anions, two 3-acetyl-pyridine ligands and two water mol-ecules within a slightly distorted CoN(4)O(2) octa-hedron. The asymmetric unit consists of one Co(2+) cation, which is located on a center of inversion, as well as one seleno-cyanate anion, one 3-acetyl-pyridine ligand and one water mol-ecule in general positions. Whereas one of the water H atoms makes a classical O-H⋯O hydrogen bond, the other shows a O-H⋯Se inter-action.

Entities:  

Year:  2012        PMID: 22590180      PMCID: PMC3344418          DOI: 10.1107/S1600536812018387

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to this work, see: Näther & Greve (2003 ▶). For the synthesis, structures and properties of the corresponding compounds with n class="Chemical">pyridine, see: Boeckmann & Näther (2010 ▶, 2011 ▶, 2012 ▶).

Experimental

Crystal data

[Co(NCSe)2(n class="CellLine">C7H7NO)2(H2O)2] M = 547.19 Monoclinic, a = 19.1098 (6) Å b = 9.0064 (4) Å c = 14.9734 (5) Å β = 128.203 (2)° V = 2025.13 (13) Å3 Z = 4 Mo Kα radiation μ = 4.47 mm−1 T = 293 K 0.35 × 0.27 × 0.19 mm

Data collection

Stoe IPDS-2 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.240, T max = 0.423 16689 measured reflections 2409 independent reflections 2260 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.066 S = 1.12 2409 reflections 125 parameters H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.45 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 2011 ▶).; software used to prepare material for publication: publCIF (Westrip, 2010) ▶. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812018387/bt5898sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018387/bt5898Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(NCSe)2(C7H7NO)2(H2O)2]F(000) = 1076
Mr = 547.19Dx = 1.795 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 16689 reflections
a = 19.1098 (6) Åθ = 2.6–27.9°
b = 9.0064 (4) ŵ = 4.47 mm1
c = 14.9734 (5) ÅT = 293 K
β = 128.203 (2)°Block, pink
V = 2025.13 (13) Å30.35 × 0.27 × 0.19 mm
Z = 4
Stoe IPDS-2 diffractometer2409 independent reflections
Radiation source: fine-focus sealed tube2260 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
ω scansθmax = 27.9°, θmin = 2.6°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −25→24
Tmin = 0.240, Tmax = 0.423k = −11→11
16689 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.066H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0275P)2 + 2.5784P] where P = (Fo2 + 2Fc2)/3
2409 reflections(Δ/σ)max < 0.001
125 parametersΔρmax = 0.50 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.50000.50000.00000.03364 (10)
Se10.725951 (16)0.09800 (3)0.20771 (2)0.05020 (9)
C10.65776 (13)0.2600 (2)0.13699 (18)0.0372 (4)
N10.61139 (12)0.3598 (2)0.09124 (17)0.0431 (4)
O10.55451 (11)0.64233 (17)0.14168 (13)0.0450 (4)
H1O0.52650.72000.12490.068*
H2O0.60800.65870.17920.068*
N110.43968 (12)0.36819 (19)0.05628 (16)0.0393 (4)
C110.44407 (14)0.2201 (2)0.06235 (18)0.0373 (4)
H110.47410.17090.04060.045*
C120.40582 (14)0.1366 (2)0.09965 (17)0.0370 (4)
C130.36145 (18)0.2091 (3)0.1322 (2)0.0499 (6)
H130.33390.15580.15600.060*
C140.3585 (2)0.3627 (3)0.1289 (3)0.0574 (7)
H140.33030.41460.15240.069*
C150.39775 (18)0.4364 (3)0.0905 (2)0.0497 (6)
H150.39520.53950.08800.060*
C160.41692 (16)−0.0284 (2)0.10701 (19)0.0423 (5)
C170.3525 (2)−0.1217 (3)0.1065 (3)0.0614 (7)
H17A0.2945−0.11290.03420.092*
H17B0.3500−0.08900.16550.092*
H17C0.3713−0.22360.11940.092*
O110.47857 (13)−0.08133 (19)0.11398 (17)0.0558 (5)
U11U22U33U12U13U23
Co10.03083 (19)0.02384 (18)0.0412 (2)0.00276 (13)0.01973 (16)0.00073 (14)
Se10.04556 (14)0.04665 (15)0.06007 (16)0.01964 (10)0.03351 (12)0.01574 (11)
C10.0309 (9)0.0380 (10)0.0403 (11)0.0027 (8)0.0208 (9)−0.0010 (8)
N10.0335 (9)0.0369 (9)0.0504 (10)0.0059 (7)0.0217 (8)0.0035 (8)
O10.0406 (8)0.0337 (8)0.0491 (9)0.0013 (6)0.0218 (7)−0.0061 (6)
N110.0400 (9)0.0303 (9)0.0499 (10)0.0021 (7)0.0289 (8)0.0011 (7)
C110.0387 (10)0.0302 (10)0.0435 (11)0.0021 (8)0.0258 (9)−0.0007 (8)
C120.0389 (10)0.0306 (10)0.0382 (10)0.0001 (8)0.0222 (9)0.0004 (8)
C130.0598 (14)0.0450 (13)0.0603 (14)−0.0013 (11)0.0449 (13)−0.0002 (11)
C140.0723 (18)0.0462 (14)0.0800 (18)0.0040 (13)0.0603 (16)−0.0056 (13)
C150.0586 (15)0.0316 (11)0.0690 (16)0.0030 (10)0.0445 (14)−0.0046 (10)
C160.0500 (12)0.0330 (10)0.0390 (10)0.0001 (9)0.0250 (10)0.0013 (8)
C170.0768 (19)0.0403 (13)0.0705 (18)−0.0095 (13)0.0473 (16)0.0032 (12)
O110.0598 (11)0.0342 (8)0.0701 (12)0.0088 (8)0.0386 (10)0.0034 (8)
Co1—N1i2.0962 (18)C11—H110.9300
Co1—N12.0962 (18)C12—C131.376 (3)
Co1—O1i2.1202 (15)C12—C161.495 (3)
Co1—O12.1202 (15)C13—C141.384 (4)
Co1—N112.1562 (19)C13—H130.9300
Co1—N11i2.1562 (19)C14—C151.367 (4)
Se1—C11.800 (2)C14—H140.9300
C1—N11.146 (3)C15—H150.9300
O1—H1O0.8201C16—O111.214 (3)
O1—H2O0.8200C16—C171.487 (4)
N11—C111.336 (3)C17—H17A0.9600
N11—C151.338 (3)C17—H17B0.9600
C11—C121.384 (3)C17—H17C0.9600
N1i—Co1—N1180.00 (8)N11—C11—H11118.6
N1i—Co1—O1i92.26 (7)C12—C11—H11118.6
N1—Co1—O1i87.74 (7)C13—C12—C11118.7 (2)
N1i—Co1—O187.74 (7)C13—C12—C16122.4 (2)
N1—Co1—O192.26 (7)C11—C12—C16118.9 (2)
O1i—Co1—O1180.00 (9)C12—C13—C14118.9 (2)
N1i—Co1—N1190.77 (7)C12—C13—H13120.6
N1—Co1—N1189.23 (7)C14—C13—H13120.6
O1i—Co1—N1190.43 (7)C15—C14—C13118.6 (2)
O1—Co1—N1189.57 (7)C15—C14—H14120.7
N1i—Co1—N11i89.23 (7)C13—C14—H14120.7
N1—Co1—N11i90.77 (7)N11—C15—C14123.6 (2)
O1i—Co1—N11i89.57 (7)N11—C15—H15118.2
O1—Co1—N11i90.43 (7)C14—C15—H15118.2
N11—Co1—N11i180.00 (9)O11—C16—C17122.3 (2)
N1—C1—Se1177.1 (2)O11—C16—C12118.8 (2)
C1—N1—Co1163.86 (18)C17—C16—C12118.8 (2)
Co1—O1—H1O112.7C16—C17—H17A109.5
Co1—O1—H2O115.2C16—C17—H17B109.5
H1O—O1—H2O110.9H17A—C17—H17B109.5
C11—N11—C15117.4 (2)C16—C17—H17C109.5
C11—N11—Co1123.37 (15)H17A—C17—H17C109.5
C15—N11—Co1119.25 (15)H17B—C17—H17C109.5
N11—C11—C12122.9 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1O···O11ii0.821.972.780 (2)169
O1—H2O···Se1iii0.822.573.338 (2)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O⋯O11i0.821.972.780 (2)169
O1—H2O⋯Se1ii0.822.573.338 (2)157

Symmetry codes: (i) ; (ii) .

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