| Literature DB >> 22590159 |
Kwang Ha1.
Abstract
In the title complex, [Pt(NCS)(2)(C(8)H(6)N(4))], the Pt(II) ion is four-coordinated in a distorted square-planar environment defined by two pyrimidine N atoms derived from a chelating 2,2'-bipyrimidine (bpym) ligand and two mutually cis N atoms from two SCN(-) anions. The thio-cyanate ligands are almost linear, displaying N-C-S bond angles of 178.6 (11) and 173.7 (11)°, and the N atoms are slightly bent coordinated to the Pt atom with Pt-N-C bond angles of 172.7 (9) and 160.4 (10)°. In the crystal, mol-ecules are held together by C-H⋯S hydrogen bonds. Intra-molecular C-H⋯N hydrogen bonds are also observed.Entities:
Year: 2012 PMID: 22590159 PMCID: PMC3344397 DOI: 10.1107/S1600536812017552
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Pt(NCS)2(C8H6N4)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5056 reflections |
| θ = 2.7–26.0° | |
| µ = 11.31 mm−1 | |
| β = 115.135 (1)° | Block, orange |
| 0.34 × 0.28 × 0.28 mm | |
| Bruker SMART 1000 CCD diffractometer | 2467 independent reflections |
| Radiation source: fine-focus sealed tube | 2179 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 7611 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2467 reflections | (Δ/σ)max < 0.001 |
| 172 parameters | Δρmax = 4.86 e Å−3 |
| 0 restraints | Δρmin = −1.72 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Pt1 | 0.16191 (4) | 0.40380 (4) | 0.58301 (3) | 0.04005 (15) | |
| S1 | −0.0058 (3) | 0.6087 (4) | 0.8261 (3) | 0.0601 (8) | |
| S2 | 0.0260 (3) | −0.0068 (3) | 0.6854 (3) | 0.0519 (7) | |
| N1 | 0.2144 (8) | 0.5882 (9) | 0.5497 (7) | 0.0382 (18) | |
| N2 | 0.3270 (10) | 0.6962 (9) | 0.4524 (8) | 0.050 (2) | |
| N3 | 0.3600 (10) | 0.4377 (10) | 0.3743 (8) | 0.049 (2) | |
| N4 | 0.2425 (8) | 0.3496 (9) | 0.4767 (7) | 0.0385 (18) | |
| N5 | 0.0853 (9) | 0.4748 (10) | 0.6838 (8) | 0.048 (2) | |
| N6 | 0.1173 (10) | 0.2136 (11) | 0.6120 (8) | 0.058 (3) | |
| C1 | 0.1920 (10) | 0.7047 (11) | 0.5879 (8) | 0.042 (2) | |
| H1 | 0.1456 | 0.7078 | 0.6352 | 0.051* | |
| C2 | 0.2375 (11) | 0.8237 (12) | 0.5579 (9) | 0.048 (3) | |
| H2 | 0.2214 | 0.9091 | 0.5835 | 0.057* | |
| C3 | 0.3061 (12) | 0.8148 (11) | 0.4906 (9) | 0.049 (3) | |
| H3 | 0.3390 | 0.8950 | 0.4711 | 0.059* | |
| C4 | 0.2822 (10) | 0.5887 (11) | 0.4827 (8) | 0.041 (2) | |
| C5 | 0.2989 (10) | 0.4514 (11) | 0.4419 (9) | 0.041 (2) | |
| C6 | 0.3601 (12) | 0.3115 (12) | 0.3349 (10) | 0.054 (3) | |
| H6 | 0.4017 | 0.2973 | 0.2848 | 0.064* | |
| C7 | 0.3040 (13) | 0.2034 (12) | 0.3627 (10) | 0.055 (3) | |
| H7 | 0.3042 | 0.1161 | 0.3317 | 0.066* | |
| C8 | 0.2465 (11) | 0.2250 (11) | 0.4376 (9) | 0.047 (2) | |
| H8 | 0.2097 | 0.1511 | 0.4615 | 0.056* | |
| C9 | 0.0462 (10) | 0.5294 (12) | 0.7422 (9) | 0.046 (3) | |
| C10 | 0.0757 (10) | 0.1268 (10) | 0.6445 (9) | 0.038 (2) |
| Pt1 | 0.0392 (2) | 0.0493 (3) | 0.0308 (2) | −0.00470 (17) | 0.01392 (16) | 0.00473 (17) |
| S1 | 0.0539 (17) | 0.082 (2) | 0.0512 (17) | 0.0017 (16) | 0.0284 (14) | −0.0038 (16) |
| S2 | 0.0481 (15) | 0.0567 (17) | 0.0519 (16) | −0.0078 (13) | 0.0222 (13) | 0.0038 (13) |
| N1 | 0.035 (4) | 0.052 (5) | 0.025 (4) | 0.000 (4) | 0.010 (3) | 0.002 (4) |
| N2 | 0.068 (6) | 0.040 (5) | 0.051 (5) | −0.003 (4) | 0.034 (5) | 0.000 (4) |
| N3 | 0.059 (6) | 0.050 (6) | 0.047 (5) | −0.002 (4) | 0.030 (5) | −0.001 (4) |
| N4 | 0.041 (4) | 0.043 (5) | 0.030 (4) | −0.005 (4) | 0.014 (4) | 0.002 (4) |
| N5 | 0.052 (5) | 0.058 (6) | 0.040 (5) | −0.004 (5) | 0.025 (4) | −0.007 (4) |
| N6 | 0.062 (6) | 0.072 (7) | 0.039 (5) | −0.018 (5) | 0.020 (5) | 0.003 (5) |
| C1 | 0.046 (6) | 0.045 (6) | 0.032 (5) | 0.003 (5) | 0.013 (4) | −0.009 (4) |
| C2 | 0.049 (6) | 0.056 (7) | 0.032 (5) | 0.002 (5) | 0.012 (5) | −0.008 (5) |
| C3 | 0.062 (7) | 0.043 (6) | 0.047 (6) | −0.012 (5) | 0.028 (5) | −0.007 (5) |
| C4 | 0.036 (5) | 0.055 (6) | 0.029 (5) | −0.003 (5) | 0.011 (4) | 0.004 (4) |
| C5 | 0.040 (5) | 0.043 (6) | 0.040 (6) | −0.005 (4) | 0.016 (5) | 0.000 (4) |
| C6 | 0.066 (7) | 0.050 (7) | 0.052 (7) | 0.003 (6) | 0.032 (6) | −0.005 (5) |
| C7 | 0.072 (8) | 0.044 (6) | 0.047 (6) | 0.008 (6) | 0.021 (6) | −0.002 (5) |
| C8 | 0.053 (6) | 0.043 (6) | 0.043 (6) | −0.007 (5) | 0.019 (5) | −0.002 (5) |
| C9 | 0.043 (6) | 0.048 (6) | 0.041 (6) | −0.006 (5) | 0.011 (5) | 0.009 (5) |
| C10 | 0.048 (6) | 0.028 (5) | 0.041 (5) | −0.006 (4) | 0.023 (5) | 0.001 (4) |
| Pt1—N1 | 2.014 (9) | N5—C9 | 1.151 (14) |
| Pt1—N4 | 1.999 (8) | N6—C10 | 1.135 (13) |
| Pt1—N5 | 1.958 (9) | C1—C2 | 1.397 (16) |
| Pt1—N6 | 2.017 (11) | C1—H1 | 0.9500 |
| S1—C9 | 1.625 (13) | C2—C3 | 1.378 (15) |
| S2—C10 | 1.602 (10) | C2—H2 | 0.9500 |
| N1—C1 | 1.316 (13) | C3—H3 | 0.9500 |
| N1—C4 | 1.363 (13) | C4—C5 | 1.494 (15) |
| N2—C4 | 1.301 (13) | C6—C7 | 1.359 (17) |
| N2—C3 | 1.328 (14) | C6—H6 | 0.9500 |
| N3—C5 | 1.318 (14) | C7—C8 | 1.380 (16) |
| N3—C6 | 1.346 (14) | C7—H7 | 0.9500 |
| N4—C8 | 1.338 (13) | C8—H8 | 0.9500 |
| N4—C5 | 1.357 (13) | ||
| N5—Pt1—N4 | 174.5 (4) | C1—C2—H2 | 120.6 |
| N5—Pt1—N1 | 93.6 (4) | N2—C3—C2 | 121.3 (11) |
| N4—Pt1—N1 | 80.9 (3) | N2—C3—H3 | 119.4 |
| N5—Pt1—N6 | 90.1 (4) | C2—C3—H3 | 119.4 |
| N4—Pt1—N6 | 95.4 (4) | N2—C4—N1 | 125.1 (10) |
| N1—Pt1—N6 | 176.2 (4) | N2—C4—C5 | 121.0 (9) |
| C1—N1—C4 | 118.5 (9) | N1—C4—C5 | 113.8 (9) |
| C1—N1—Pt1 | 126.4 (7) | N3—C5—N4 | 125.5 (10) |
| C4—N1—Pt1 | 115.1 (7) | N3—C5—C4 | 120.1 (9) |
| C4—N2—C3 | 117.4 (9) | N4—C5—C4 | 114.4 (9) |
| C5—N3—C6 | 115.3 (10) | N3—C6—C7 | 123.7 (11) |
| C8—N4—C5 | 117.6 (9) | N3—C6—H6 | 118.1 |
| C8—N4—Pt1 | 126.9 (7) | C7—C6—H6 | 118.1 |
| C5—N4—Pt1 | 115.5 (7) | C6—C7—C8 | 117.5 (11) |
| C9—N5—Pt1 | 172.7 (9) | C6—C7—H7 | 121.3 |
| C10—N6—Pt1 | 160.4 (10) | C8—C7—H7 | 121.3 |
| N1—C1—C2 | 118.9 (10) | N4—C8—C7 | 120.3 (10) |
| N1—C1—H1 | 120.5 | N4—C8—H8 | 119.8 |
| C2—C1—H1 | 120.5 | C7—C8—H8 | 119.8 |
| C3—C2—C1 | 118.8 (10) | N5—C9—S1 | 178.6 (11) |
| C3—C2—H2 | 120.6 | N6—C10—S2 | 173.7 (11) |
| N5—Pt1—N1—C1 | −1.9 (8) | Pt1—N1—C4—N2 | −178.9 (8) |
| N4—Pt1—N1—C1 | 177.6 (9) | C1—N1—C4—C5 | −178.5 (8) |
| N5—Pt1—N1—C4 | 176.6 (7) | Pt1—N1—C4—C5 | 2.8 (10) |
| N4—Pt1—N1—C4 | −3.9 (7) | C6—N3—C5—N4 | 2.6 (16) |
| N1—Pt1—N4—C8 | −175.8 (9) | C6—N3—C5—C4 | −174.8 (10) |
| N6—Pt1—N4—C8 | 5.2 (9) | C8—N4—C5—N3 | −1.5 (16) |
| N1—Pt1—N4—C5 | 4.4 (7) | Pt1—N4—C5—N3 | 178.3 (9) |
| N6—Pt1—N4—C5 | −174.5 (7) | C8—N4—C5—C4 | 176.0 (9) |
| N5—Pt1—N6—C10 | 5 (3) | Pt1—N4—C5—C4 | −4.2 (11) |
| N4—Pt1—N6—C10 | −174 (3) | N2—C4—C5—N3 | 0.2 (16) |
| C4—N1—C1—C2 | 0.4 (14) | N1—C4—C5—N3 | 178.5 (9) |
| Pt1—N1—C1—C2 | 178.9 (7) | N2—C4—C5—N4 | −177.5 (9) |
| N1—C1—C2—C3 | −0.9 (15) | N1—C4—C5—N4 | 0.9 (13) |
| C4—N2—C3—C2 | −1.2 (17) | C5—N3—C6—C7 | −1.1 (18) |
| C1—C2—C3—N2 | 1.3 (17) | N3—C6—C7—C8 | −1.4 (19) |
| C3—N2—C4—N1 | 0.7 (16) | C5—N4—C8—C7 | −1.3 (15) |
| C3—N2—C4—C5 | 178.8 (10) | Pt1—N4—C8—C7 | 178.9 (8) |
| C1—N1—C4—N2 | −0.3 (15) | C6—C7—C8—N4 | 2.6 (17) |
| H··· | ||||
| C1—H1···N5 | 0.95 | 2.55 | 3.053 (15) | 114 |
| C8—H8···N6 | 0.95 | 2.62 | 3.138 (15) | 115 |
| C8—H8···S2i | 0.95 | 2.87 | 3.496 (11) | 124 |
Selected bond lengths (Å)
| Pt1—N1 | 2.014 (9) |
| Pt1—N4 | 1.999 (8) |
| Pt1—N5 | 1.958 (9) |
| Pt1—N6 | 2.017 (11) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1⋯N5 | 0.95 | 2.55 | 3.053 (15) | 114 |
| C8—H8⋯N6 | 0.95 | 2.62 | 3.138 (15) | 115 |
| C8—H8⋯S2i | 0.95 | 2.87 | 3.496 (11) | 124 |
Symmetry code: (i) .