| Literature DB >> 22590158 |
Abstract
In the title compound, [Entities:
Year: 2012 PMID: 22590158 PMCID: PMC3344396 DOI: 10.1107/S1600536812017199
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CoCl3(C6H13N2)] | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1860 reflections |
| θ = 3.3–27.5° | |
| µ = 2.40 mm−1 | |
| β = 116.96 (3)° | Block, black |
| 0.36 × 0.32 × 0.28 mm | |
| Rigaku SCXmini diffractometer | 2343 independent reflections |
| Radiation source: fine-focus sealed tube | 2263 reflections with |
| Graphite monochromator | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5285 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.015 | |
| 2343 reflections | Δρmax = 0.29 e Å−3 |
| 113 parameters | Δρmin = −0.33 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1103 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.032 (13) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.56604 (4) | −0.11682 (3) | 0.70822 (5) | 0.02232 (9) | |
| Cl2 | 0.22414 (9) | −0.06559 (5) | 0.46983 (10) | 0.03324 (15) | |
| Cl3 | 0.71041 (10) | −0.24845 (5) | 0.59195 (11) | 0.03334 (15) | |
| Cl1 | 0.58299 (12) | −0.15466 (6) | 1.03206 (12) | 0.04149 (18) | |
| C3 | 0.8485 (4) | 0.2022 (2) | 0.8668 (4) | 0.0297 (6) | |
| H3A | 0.7499 | 0.2592 | 0.7795 | 0.036* | |
| H3B | 0.9268 | 0.2270 | 1.0155 | 0.036* | |
| C6 | 0.8946 (5) | 0.1423 (2) | 0.5520 (5) | 0.0376 (7) | |
| H6A | 1.0015 | 0.1210 | 0.5004 | 0.045* | |
| H6B | 0.8083 | 0.2026 | 0.4658 | 0.045* | |
| N2 | 0.7709 (3) | 0.01327 (16) | 0.7478 (3) | 0.0192 (4) | |
| C1 | 0.7407 (4) | 0.0495 (2) | 0.5324 (4) | 0.0263 (5) | |
| H1A | 0.5861 | 0.0715 | 0.4455 | 0.032* | |
| H1B | 0.7714 | −0.0100 | 0.4591 | 0.032* | |
| C5 | 1.0080 (4) | −0.0144 (2) | 0.8778 (5) | 0.0315 (6) | |
| H5A | 1.0497 | −0.0698 | 0.8043 | 0.038* | |
| H5B | 1.0302 | −0.0429 | 1.0164 | 0.038* | |
| C2 | 0.7144 (4) | 0.1024 (2) | 0.8533 (4) | 0.0292 (6) | |
| H2A | 0.7435 | 0.0807 | 0.9982 | 0.035* | |
| H2B | 0.5557 | 0.1185 | 0.7726 | 0.035* | |
| N1 | 1.0141 (4) | 0.17317 (18) | 0.7836 (4) | 0.0359 (6) | |
| C4 | 1.1569 (4) | 0.0829 (2) | 0.9146 (5) | 0.0417 (8) | |
| H4A | 1.2289 | 0.1021 | 1.0669 | 0.050* | |
| H4B | 1.2726 | 0.0672 | 0.8709 | 0.050* | |
| H1 | 1.107 (5) | 0.227 (3) | 0.801 (5) | 0.054 (9)* |
| Co1 | 0.02136 (15) | 0.01775 (14) | 0.02842 (17) | −0.00118 (13) | 0.01178 (13) | 0.00032 (14) |
| Cl2 | 0.0236 (3) | 0.0317 (3) | 0.0374 (4) | 0.0042 (3) | 0.0077 (3) | −0.0033 (3) |
| Cl3 | 0.0330 (3) | 0.0271 (3) | 0.0387 (4) | 0.0038 (3) | 0.0151 (3) | −0.0067 (3) |
| Cl1 | 0.0459 (4) | 0.0486 (4) | 0.0399 (4) | 0.0150 (3) | 0.0282 (3) | 0.0172 (3) |
| C3 | 0.0292 (13) | 0.0218 (12) | 0.0389 (16) | −0.0013 (10) | 0.0162 (12) | −0.0093 (11) |
| C6 | 0.0531 (18) | 0.0252 (13) | 0.0506 (19) | −0.0018 (12) | 0.0375 (16) | 0.0032 (13) |
| N2 | 0.0179 (9) | 0.0177 (9) | 0.0221 (11) | −0.0009 (7) | 0.0092 (9) | 0.0003 (8) |
| C1 | 0.0314 (13) | 0.0262 (13) | 0.0213 (13) | −0.0019 (11) | 0.0119 (11) | 0.0034 (11) |
| C5 | 0.0211 (12) | 0.0267 (14) | 0.0396 (16) | 0.0022 (10) | 0.0075 (12) | 0.0023 (12) |
| C2 | 0.0350 (13) | 0.0240 (13) | 0.0374 (15) | −0.0030 (10) | 0.0240 (13) | −0.0069 (11) |
| N1 | 0.0307 (12) | 0.0215 (11) | 0.0629 (17) | −0.0090 (9) | 0.0278 (12) | −0.0081 (11) |
| C4 | 0.0169 (12) | 0.0366 (16) | 0.061 (2) | −0.0037 (11) | 0.0088 (13) | −0.0122 (15) |
| Co1—N2 | 2.0559 (19) | N2—C2 | 1.468 (3) |
| Co1—Cl2 | 2.2220 (11) | N2—C1 | 1.483 (3) |
| Co1—Cl3 | 2.2281 (7) | C1—H1A | 0.9700 |
| Co1—Cl1 | 2.2449 (9) | C1—H1B | 0.9700 |
| C3—N1 | 1.506 (3) | C5—C4 | 1.513 (3) |
| C3—C2 | 1.509 (3) | C5—H5A | 0.9700 |
| C3—H3A | 0.9700 | C5—H5B | 0.9700 |
| C3—H3B | 0.9700 | C2—H2A | 0.9700 |
| C6—N1 | 1.483 (4) | C2—H2B | 0.9700 |
| C6—C1 | 1.511 (3) | N1—C4 | 1.486 (4) |
| C6—H6A | 0.9700 | N1—H1 | 0.89 (3) |
| C6—H6B | 0.9700 | C4—H4A | 0.9700 |
| N2—C5 | 1.466 (3) | C4—H4B | 0.9700 |
| N2—Co1—Cl2 | 105.80 (6) | N2—C1—H1B | 109.3 |
| N2—Co1—Cl3 | 104.73 (6) | C6—C1—H1B | 109.3 |
| Cl2—Co1—Cl3 | 114.22 (3) | H1A—C1—H1B | 108.0 |
| N2—Co1—Cl1 | 107.64 (6) | N2—C5—C4 | 111.2 (2) |
| Cl2—Co1—Cl1 | 111.83 (4) | N2—C5—H5A | 109.4 |
| Cl3—Co1—Cl1 | 111.95 (3) | C4—C5—H5A | 109.4 |
| N1—C3—C2 | 107.37 (19) | N2—C5—H5B | 109.4 |
| N1—C3—H3A | 110.2 | C4—C5—H5B | 109.4 |
| C2—C3—H3A | 110.2 | H5A—C5—H5B | 108.0 |
| N1—C3—H3B | 110.2 | N2—C2—C3 | 111.83 (19) |
| C2—C3—H3B | 110.2 | N2—C2—H2A | 109.2 |
| H3A—C3—H3B | 108.5 | C3—C2—H2A | 109.2 |
| N1—C6—C1 | 107.8 (2) | N2—C2—H2B | 109.2 |
| N1—C6—H6A | 110.1 | C3—C2—H2B | 109.2 |
| C1—C6—H6A | 110.1 | H2A—C2—H2B | 107.9 |
| N1—C6—H6B | 110.1 | C6—N1—C4 | 110.3 (2) |
| C1—C6—H6B | 110.1 | C6—N1—C3 | 110.3 (2) |
| H6A—C6—H6B | 108.5 | C4—N1—C3 | 109.1 (2) |
| C5—N2—C2 | 108.7 (2) | C6—N1—H1 | 110 (2) |
| C5—N2—C1 | 107.81 (17) | C4—N1—H1 | 106 (2) |
| C2—N2—C1 | 108.89 (19) | C3—N1—H1 | 111 (2) |
| C5—N2—Co1 | 111.54 (15) | N1—C4—C5 | 108.0 (2) |
| C2—N2—Co1 | 110.73 (14) | N1—C4—H4A | 110.1 |
| C1—N2—Co1 | 109.05 (14) | C5—C4—H4A | 110.1 |
| N2—C1—C6 | 111.4 (2) | N1—C4—H4B | 110.1 |
| N2—C1—H1A | 109.3 | C5—C4—H4B | 110.1 |
| C6—C1—H1A | 109.3 | H4A—C4—H4B | 108.4 |
| H··· | ||||
| N1—H1···Cl1i | 0.89 (3) | 2.37 (3) | 3.217 (2) | 160 (3) |
| C3—H3 | 0.97 | 2.83 | 3.603 (3) | 137 |
| C3—H3 | 0.97 | 2.72 | 3.621 (3) | 155 |
| C6—H6 | 0.97 | 2.81 | 3.494 (3) | 129 |
| C6—H6 | 0.97 | 2.82 | 3.605 (3) | 139 |
| C5—H5 | 0.97 | 2.82 | 3.735 (3) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯Cl1i | 0.89 (3) | 2.37 (3) | 3.217 (2) | 160 (3) |
| C3—H3 | 0.97 | 2.83 | 3.603 (3) | 137 |
| C3—H3 | 0.97 | 2.72 | 3.621 (3) | 155 |
| C6—H6 | 0.97 | 2.81 | 3.494 (3) | 129 |
| C6—H6 | 0.97 | 2.82 | 3.605 (3) | 139 |
| C5—H5 | 0.97 | 2.82 | 3.735 (3) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .