Literature DB >> 22590157

Aqua-trichlorido(1-cyano-methyl-4-aza-1-azoniabicyclo-[2.2.2]octane-κN(4))copper(II) monohydrate.

Qinqin Zhou1, Yi Zhang.   

Abstract

The asymmetric unit of the title compound, [CuCl(3)(C(8)H(14)N(3))(H(2)O)]·H(2)O, comprises a neutral complex and a mol-ecule of free water. The complex contains coordinated Cu(II) ions, with Cu-Cl distances ranging from 2.3471 (8) to 2.4011 (8) Å, and with Cu-N and Cu-O distances of 2.0775 (19) and 2.0048 (18) Å, respectively. The resulting coordination polyhedron is a trigonal bipyramid with the Cl atoms in the equatorial plane. In the crystal, O-H⋯Cl and O-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional structure.

Entities:  

Year:  2012        PMID: 22590157      PMCID: PMC3344395          DOI: 10.1107/S1600536812017205

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to dielectric-ferroelectric materials, see: Fu et al. (2010 ▶); Zhang et al. (2008 ▶). The title compound was prepared in an attempt to make analogs of (dabcoH2)2Cl3[CuCl3(H2O)2H2O (Wei & Willett, 1996 ▶) and (dabcoH2)CuCl4 and Zn(dabcoH)Cl3 (Wei & Willett, 2001 ▶) (dabco is 1,4-diazabicyclo[2.2.2]octan).

Experimental

Crystal data

[CuCl3(C8H14N3)(H2O)H2O M = 358.14 Monoclinic, a = 24.301 (5) Å b = 8.2794 (17) Å c = 14.069 (3) Å β = 101.69 (3)° V = 2771.9 (10) Å3 Z = 8 Mo Kα radiation μ = 2.15 mm−1 T = 298 K 0.36 × 0.32 × 0.28 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.963, T max = 0.971 13618 measured reflections 3155 independent reflections 2881 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.093 S = 1.10 3155 reflections 170 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.62 e Å−3 Δρmin = −0.86 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812017205/fj2535sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017205/fj2535Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CuCl3(C8H14N3)(H2O)]·H2OF(000) = 1464
Mr = 358.14Dx = 1.716 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 12903 reflections
a = 24.301 (5) Åθ = 3.1–27.5°
b = 8.2794 (17) ŵ = 2.15 mm1
c = 14.069 (3) ÅT = 298 K
β = 101.69 (3)°Block, green
V = 2771.9 (10) Å30.36 × 0.32 × 0.28 mm
Z = 8
Rigaku SCXmini diffractometer3155 independent reflections
Radiation source: fine-focus sealed tube2881 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.068
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.1°
ω scansh = −31→31
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −10→10
Tmin = 0.963, Tmax = 0.971l = −18→18
13618 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.037P)2 + 2.7164P] where P = (Fo2 + 2Fc2)/3
3155 reflections(Δ/σ)max < 0.001
170 parametersΔρmax = 0.62 e Å3
0 restraintsΔρmin = −0.86 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.08955 (10)0.0927 (3)0.17062 (17)0.0250 (5)
H1A0.05500.09370.19510.030*
H1B0.1083−0.00940.18870.030*
C20.07568 (10)0.1079 (3)0.05965 (17)0.0246 (5)
H2A0.09220.01820.03090.030*
H2B0.03530.10420.03660.030*
C30.09449 (10)0.3817 (3)0.19080 (16)0.0215 (5)
H3A0.11820.47230.21640.026*
H3B0.06210.38200.22120.026*
C40.07485 (10)0.4018 (3)0.08053 (16)0.0232 (5)
H4A0.03410.40020.06360.028*
H4B0.08770.50470.06030.028*
C50.17741 (9)0.2318 (3)0.17037 (17)0.0215 (5)
H5A0.19650.12850.18060.026*
H5B0.20310.31420.20190.026*
C60.16180 (10)0.2671 (3)0.06133 (18)0.0261 (5)
H6A0.17640.37180.04790.031*
H6B0.17820.18590.02580.031*
C70.08423 (11)0.2867 (3)−0.07951 (18)0.0300 (6)
H7A0.09860.3898−0.09640.036*
H7B0.10230.2023−0.10990.036*
C80.02328 (12)0.2805 (3)−0.11707 (18)0.0314 (6)
Cl20.20113 (3)0.44899 (7)0.38684 (4)0.02851 (16)
Cl30.19677 (3)−0.05276 (7)0.34199 (4)0.02920 (16)
Cl40.06069 (3)0.23400 (10)0.39370 (5)0.03668 (18)
Cu10.151563 (11)0.19653 (3)0.364527 (19)0.01994 (11)
H100.217 (2)0.384 (6)0.666 (3)0.091 (19)*
H110.187 (2)0.295 (5)0.709 (3)0.074 (17)*
H120.1751 (17)0.215 (5)0.543 (3)0.063 (13)*
H130.2148 (17)0.111 (4)0.521 (3)0.055 (10)*
N10.12648 (8)0.2280 (2)0.21552 (13)0.0166 (4)
N20.09851 (8)0.2654 (2)0.02936 (14)0.0197 (4)
N3−0.02358 (12)0.2753 (4)−0.14739 (19)0.0471 (7)
O10.18732 (11)0.3383 (3)0.66114 (18)0.0418 (5)
O20.17734 (8)0.1430 (2)0.50550 (13)0.0276 (4)
U11U22U33U12U13U23
C10.0211 (12)0.0239 (12)0.0279 (12)−0.0077 (10)0.0001 (9)0.0016 (9)
C20.0241 (12)0.0221 (12)0.0263 (12)−0.0055 (10)0.0018 (9)−0.0047 (9)
C30.0207 (11)0.0226 (12)0.0208 (11)0.0067 (9)0.0030 (9)0.0008 (8)
C40.0241 (12)0.0215 (12)0.0228 (12)0.0048 (9)0.0019 (9)−0.0007 (9)
C50.0121 (11)0.0287 (12)0.0238 (12)0.0007 (9)0.0036 (9)0.0016 (9)
C60.0133 (12)0.0402 (14)0.0255 (13)−0.0021 (10)0.0057 (9)0.0013 (10)
C70.0272 (14)0.0432 (16)0.0190 (12)0.0016 (11)0.0035 (10)−0.0018 (10)
C80.0329 (16)0.0393 (15)0.0204 (12)0.0038 (12)0.0013 (11)−0.0021 (10)
Cl20.0248 (3)0.0267 (3)0.0309 (3)−0.0035 (2)−0.0016 (2)−0.0039 (2)
Cl30.0303 (3)0.0266 (3)0.0309 (3)0.0101 (2)0.0067 (2)0.0034 (2)
Cl40.0170 (3)0.0620 (5)0.0328 (4)0.0085 (3)0.0093 (3)0.0129 (3)
Cu10.01484 (17)0.02434 (18)0.01982 (17)0.00123 (10)0.00157 (11)0.00118 (10)
N10.0110 (9)0.0189 (9)0.0196 (9)−0.0008 (7)0.0023 (7)0.0001 (7)
N20.0159 (10)0.0259 (10)0.0172 (9)0.0007 (8)0.0029 (7)−0.0018 (7)
N30.0357 (16)0.0609 (18)0.0387 (15)0.0060 (13)−0.0065 (11)−0.0060 (12)
O10.0392 (14)0.0456 (13)0.0378 (13)0.0086 (11)0.0013 (10)−0.0065 (10)
O20.0252 (10)0.0324 (10)0.0229 (9)0.0049 (8)−0.0007 (7)0.0000 (7)
C1—N11.493 (3)C6—N21.513 (3)
C1—C21.534 (3)C6—H6A0.9700
C1—H1A0.9700C6—H6B0.9700
C1—H1B0.9700C7—C81.469 (4)
C2—N21.512 (3)C7—N21.511 (3)
C2—H2A0.9700C7—H7A0.9700
C2—H2B0.9700C7—H7B0.9700
C3—N11.495 (3)C8—N31.133 (4)
C3—C41.537 (3)Cl2—Cu12.4011 (8)
C3—H3A0.9700Cl3—Cu12.3893 (7)
C3—H3B0.9700Cl4—Cu12.3471 (8)
C4—N21.514 (3)Cu1—O22.0048 (18)
C4—H4A0.9700Cu1—N12.0775 (19)
C4—H4B0.9700O1—H100.80 (5)
C5—N11.502 (3)O1—H110.77 (5)
C5—C61.532 (3)O2—H120.80 (4)
C5—H5A0.9700O2—H130.93 (4)
C5—H5B0.9700
N1—C1—C2111.02 (18)H6A—C6—H6B108.3
N1—C1—H1A109.4C8—C7—N2111.6 (2)
C2—C1—H1A109.4C8—C7—H7A109.3
N1—C1—H1B109.4N2—C7—H7A109.3
C2—C1—H1B109.4C8—C7—H7B109.3
H1A—C1—H1B108.0N2—C7—H7B109.3
N2—C2—C1109.86 (18)H7A—C7—H7B108.0
N2—C2—H2A109.7N3—C8—C7179.0 (3)
C1—C2—H2A109.7O2—Cu1—N1174.24 (8)
N2—C2—H2B109.7O2—Cu1—Cl488.43 (6)
C1—C2—H2B109.7N1—Cu1—Cl493.78 (6)
H2A—C2—H2B108.2O2—Cu1—Cl383.13 (6)
N1—C3—C4111.57 (18)N1—Cu1—Cl391.32 (5)
N1—C3—H3A109.3Cl4—Cu1—Cl3127.71 (3)
C4—C3—H3A109.3O2—Cu1—Cl290.87 (6)
N1—C3—H3B109.3N1—Cu1—Cl293.43 (6)
C4—C3—H3B109.3Cl4—Cu1—Cl2109.08 (3)
H3A—C3—H3B108.0Cl3—Cu1—Cl2122.51 (3)
N2—C4—C3109.19 (18)C1—N1—C3107.48 (17)
N2—C4—H4A109.8C1—N1—C5108.24 (18)
C3—C4—H4A109.8C3—N1—C5108.54 (18)
N2—C4—H4B109.8C1—N1—Cu1111.19 (14)
C3—C4—H4B109.8C3—N1—Cu1111.95 (13)
H4A—C4—H4B108.3C5—N1—Cu1109.34 (14)
N1—C5—C6111.69 (18)C7—N2—C2111.36 (18)
N1—C5—H5A109.3C7—N2—C6108.14 (18)
C6—C5—H5A109.3C2—N2—C6109.45 (19)
N1—C5—H5B109.3C7—N2—C4111.33 (18)
C6—C5—H5B109.3C2—N2—C4108.25 (18)
H5A—C5—H5B107.9C6—N2—C4108.26 (18)
N2—C6—C5109.06 (18)H10—O1—H11109 (5)
N2—C6—H6A109.9Cu1—O2—H12116 (3)
C5—C6—H6A109.9Cu1—O2—H13113 (2)
N2—C6—H6B109.9H12—O2—H13104 (4)
C5—C6—H6B109.9
D—H···AD—HH···AD···AD—H···A
O2—H13···Cl2i0.93 (4)2.24 (4)3.128 (2)159 (3)
O2—H12···O10.80 (4)1.92 (4)2.693 (3)160 (4)
O1—H11···Cl3ii0.77 (5)2.72 (5)3.447 (3)159 (4)
O1—H10···Cl3i0.80 (5)2.54 (6)3.337 (3)171 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H13⋯Cl2i0.93 (4)2.24 (4)3.128 (2)159 (3)
O2—H12⋯O10.80 (4)1.92 (4)2.693 (3)160 (4)
O1—H11⋯Cl3ii0.77 (5)2.72 (5)3.447 (3)159 (4)
O1—H10⋯Cl3i0.80 (5)2.54 (6)3.337 (3)171 (5)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Synthesis, Crystal Structure, and EPR Studies of the Five-Coordinate [CuCl(3)(H(2)O)(2)](-) Complex in (dabcoH(2))(2)Cl(3)[CuCl(3)(H(2)O)(2)].H(2)O.

Authors:  Mingyi Wei; Roger D. Willett
Journal:  Inorg Chem       Date:  1996-10-23       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  3D framework containing Cu4Br4 cubane as connecting node with strong ferroelectricity.

Authors:  Wen Zhang; Ren-Gen Xiong; Songping D Huang
Journal:  J Am Chem Soc       Date:  2008-07-18       Impact factor: 15.419

  3 in total

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