Literature DB >> 22590149

1-Cyano-methyl-1,4-diazo-niabicyclo-[2.2.2]octane tetra-chloridocobaltate(II).

Yi Zhang1, Bo-Han Zhu.   

Abstract

In the title salt, (C(8)n class="Chemical">H(15)N(3))[CoCl(4)], the four chloride anions coordinate the Co(II) ion in a distorted tetra-hedral geometry. In the crystal, N-H⋯Cl hydrogen bonds link cations and anions into chains running along the c axis. The crystal packing is further stabilized by weak C-H⋯Cl and C-H⋯N inter-actions.

Entities:  

Year:  2012        PMID: 22590149      PMCID: PMC3344387          DOI: 10.1107/S1600536812017187

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Crystal structures of related Cu and n class="Chemical">Cd analogs were reported by Wei (2010 ▶) and Zhang & Zhu (2012 ▶), respectively. For ferroelectric properties of 1,4-diaza­bicyclo­[2.2.2]octane deriv­atives, see: Zhang et al. (2009 ▶, 2010 ▶).

Experimental

Crystal data

(C8H15N3)[n class="Chemical">CoCl4] M = 353.96 Monoclinic, a = 8.3085 (17) Å b = 13.604 (3) Å c = 12.185 (2) Å β = 93.78 (3)° V = 1374.3 (5) Å3 Z = 4 Mo Kα radiation μ = 2.00 mm−1 T = 298 K 0.36 × 0.32 × 0.28 mm

Data collection

Rigaku Mercury70 Cn class="Chemical">CD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.491, T max = 0.571 13757 measured reflections 3152 independent reflections 2724 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.135 S = 0.98 3152 reflections 149 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.58 e Å−3 Δρmin = −0.52 e Å−3 Data collection: SCXmini Benchtop Crystallography System Software (Rigaku, 2006 ▶); cell refinement: SCXmini Benchtop Crystallography System Software; data reduction: SCXmini Benchtop Crystallography System Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812017187/cv5283sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017187/cv5283Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C8H15N3)[CoCl4]F(000) = 716
Mr = 353.96Dx = 1.711 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2622 reflections
a = 8.3085 (17) Åθ = 3.1–27.5°
b = 13.604 (3) ŵ = 2.00 mm1
c = 12.185 (2) ÅT = 298 K
β = 93.78 (3)°Block, blue
V = 1374.3 (5) Å30.36 × 0.32 × 0.28 mm
Z = 4
Rigaku Mercury70 CCD diffractometer3152 independent reflections
Radiation source: fine-focus sealed tube2724 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.057
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.0°
ω scansh = −10→10
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −17→17
Tmin = 0.491, Tmax = 0.571l = −15→15
13757 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H atoms treated by a mixture of independent and constrained refinement
S = 0.98w = 1/[σ2(Fo2) + (0.069P)2 + 4.1266P] where P = (Fo2 + 2Fc2)/3
3152 reflections(Δ/σ)max = 0.001
149 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.52 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.22754 (6)1.23132 (4)−0.01115 (4)0.02235 (17)
Cl20.22305 (12)1.24111 (8)−0.19820 (7)0.0304 (2)
Cl30.19972 (12)1.39179 (7)0.04142 (8)0.0276 (2)
Cl40.00899 (12)1.14672 (8)0.04230 (8)0.0321 (2)
Cl10.46675 (12)1.16243 (8)0.04912 (8)0.0325 (2)
N20.1021 (4)0.8570 (2)0.3083 (3)0.0232 (7)
C80.5802 (5)1.0508 (3)0.2980 (4)0.0295 (9)
N10.3699 (3)0.9263 (2)0.2626 (2)0.0179 (6)
C70.5319 (5)0.9636 (3)0.2328 (3)0.0254 (8)
H7A0.61200.91230.24580.031*
H7B0.52700.98010.15520.031*
C20.3635 (5)0.9171 (4)0.3857 (3)0.0304 (9)
H2A0.36990.98170.41920.037*
H2B0.45450.87860.41540.037*
C60.0766 (5)0.9545 (3)0.2549 (4)0.0328 (9)
H6A0.03311.00040.30620.039*
H6B0.00000.94850.19160.039*
C50.1811 (5)0.7878 (3)0.2331 (3)0.0284 (9)
H5A0.11730.78310.16370.034*
H5B0.18830.72280.26570.034*
C40.2072 (5)0.8675 (3)0.4119 (3)0.0275 (8)
H4A0.22970.80330.44390.033*
H4B0.15260.90660.46460.033*
C10.2367 (5)0.9922 (4)0.2188 (4)0.0395 (11)
H1A0.23440.99390.13910.047*
H1B0.25531.05850.24600.047*
N30.6229 (5)1.1147 (3)0.3508 (3)0.0417 (10)
C30.3479 (5)0.8252 (3)0.2136 (4)0.0338 (10)
H3A0.42830.78090.24720.041*
H3B0.36200.82770.13530.041*
H100.009 (6)0.840 (4)0.329 (4)0.032 (12)*
U11U22U33U12U13U23
Co10.0229 (3)0.0220 (3)0.0222 (3)0.0000 (2)0.00147 (19)−0.00076 (19)
Cl20.0287 (5)0.0414 (6)0.0211 (4)−0.0016 (4)0.0011 (3)−0.0027 (4)
Cl30.0320 (5)0.0209 (5)0.0305 (5)−0.0024 (4)0.0066 (4)−0.0011 (4)
Cl40.0302 (5)0.0298 (5)0.0366 (5)−0.0057 (4)0.0045 (4)0.0038 (4)
Cl10.0283 (5)0.0377 (6)0.0312 (5)0.0063 (4)0.0012 (4)0.0073 (4)
N20.0190 (15)0.0256 (17)0.0257 (15)−0.0021 (13)0.0063 (12)−0.0035 (13)
C80.027 (2)0.023 (2)0.038 (2)−0.0038 (17)−0.0002 (16)0.0084 (17)
N10.0182 (14)0.0165 (15)0.0190 (14)−0.0004 (12)0.0023 (11)−0.0008 (11)
C70.0220 (18)0.026 (2)0.0294 (19)−0.0053 (15)0.0074 (15)0.0016 (15)
C20.0255 (19)0.047 (3)0.0185 (17)−0.0080 (18)0.0007 (14)−0.0004 (17)
C60.025 (2)0.031 (2)0.043 (2)0.0093 (17)0.0031 (17)0.0025 (18)
C50.0262 (19)0.026 (2)0.034 (2)−0.0063 (16)0.0053 (16)−0.0129 (16)
C40.030 (2)0.035 (2)0.0182 (16)−0.0063 (17)0.0057 (15)−0.0023 (15)
C10.028 (2)0.031 (2)0.059 (3)0.0022 (18)−0.005 (2)0.020 (2)
N30.052 (2)0.028 (2)0.044 (2)−0.0136 (18)−0.0076 (18)0.0070 (17)
C30.034 (2)0.026 (2)0.044 (2)−0.0080 (17)0.0192 (19)−0.0181 (18)
Co1—Cl12.2749 (12)C2—C41.516 (5)
Co1—Cl42.2808 (12)C2—H2A0.9700
Co1—Cl22.2809 (11)C2—H2B0.9700
Co1—Cl32.2910 (12)C6—C11.518 (6)
N2—C61.487 (5)C6—H6A0.9700
N2—C41.493 (5)C6—H6B0.9700
N2—C51.496 (5)C5—C31.510 (6)
N2—H100.86 (5)C5—H5A0.9700
C8—N31.125 (6)C5—H5B0.9700
C8—C71.469 (6)C4—H4A0.9700
N1—C11.495 (5)C4—H4B0.9700
N1—C71.505 (4)C1—H1A0.9700
N1—C31.506 (5)C1—H1B0.9700
N1—C21.510 (5)C3—H3A0.9700
C7—H7A0.9700C3—H3B0.9700
C7—H7B0.9700
Cl1—Co1—Cl4113.26 (5)N2—C6—C1109.0 (3)
Cl1—Co1—Cl2107.64 (5)N2—C6—H6A109.9
Cl4—Co1—Cl2110.73 (5)C1—C6—H6A109.9
Cl1—Co1—Cl3113.85 (5)N2—C6—H6B109.9
Cl4—Co1—Cl3107.70 (4)C1—C6—H6B109.9
Cl2—Co1—Cl3103.21 (4)H6A—C6—H6B108.3
C6—N2—C4110.1 (3)N2—C5—C3109.2 (3)
C6—N2—C5110.4 (3)N2—C5—H5A109.8
C4—N2—C5108.9 (3)C3—C5—H5A109.8
C6—N2—H10105 (3)N2—C5—H5B109.8
C4—N2—H10106 (3)C3—C5—H5B109.8
C5—N2—H10116 (3)H5A—C5—H5B108.3
N3—C8—C7176.4 (5)N2—C4—C2109.0 (3)
C1—N1—C7111.4 (3)N2—C4—H4A109.9
C1—N1—C3109.8 (3)C2—C4—H4A109.9
C7—N1—C3107.4 (3)N2—C4—H4B109.9
C1—N1—C2109.3 (3)C2—C4—H4B109.9
C7—N1—C2111.0 (3)H4A—C4—H4B108.3
C3—N1—C2107.8 (3)N1—C1—C6109.7 (3)
C8—C7—N1111.0 (3)N1—C1—H1A109.7
C8—C7—H7A109.4C6—C1—H1A109.7
N1—C7—H7A109.4N1—C1—H1B109.7
C8—C7—H7B109.4C6—C1—H1B109.7
N1—C7—H7B109.4H1A—C1—H1B108.2
H7A—C7—H7B108.0N1—C3—C5109.5 (3)
N1—C2—C4109.5 (3)N1—C3—H3A109.8
N1—C2—H2A109.8C5—C3—H3A109.8
C4—C2—H2A109.8N1—C3—H3B109.8
N1—C2—H2B109.8C5—C3—H3B109.8
C4—C2—H2B109.8H3A—C3—H3B108.2
H2A—C2—H2B108.2
D—H···AD—HH···AD···AD—H···A
N2—H10···Cl3i0.86 (5)2.52 (5)3.236 (3)140 (4)
N2—H10···Cl2ii0.86 (5)2.65 (5)3.225 (3)125 (4)
C3—H3B···Cl1iii0.972.743.647 (4)156
C7—H7A···Cl2iii0.972.583.492 (4)156
C2—H2A···Cl3iv0.972.733.543 (4)142
C3—H3A···N3v0.972.582.983 (4)105
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H10⋯Cl3i0.86 (5)2.52 (5)3.236 (3)140 (4)
N2—H10⋯Cl2ii0.86 (5)2.65 (5)3.225 (3)125 (4)
C3—H3B⋯Cl1iii0.972.743.647 (4)156
C7—H7A⋯Cl2iii0.972.583.492 (4)156
C2—H2A⋯Cl3iv0.972.733.543 (4)142
C3—H3A⋯N3v0.972.582.983 (4)105

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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