Literature DB >> 22590105

catena-Poly[[[tetra-aqua-copper(II)]-μ-4,4'-bipyridyl-κ(2)N:N'] tetra-fluorido-succinate tetra-hydrate].

Guo-Jun Yu1, Lan-Ping Xu, Lan Qin, Lei Han.   

Abstract

In the title compound, {[Cu(C(10)H(8)N(2))(H(2)O)(4)](C(4)F(4)O(4))·4H(2)O}(n), the Cu(II) atom adopts an elongated octa-hedral geometry because of the Jahn-Teller effect. Both cation and anion have crystallographic twofold rotation symmetry with the twofold axes passing through the Cu and N atoms and through the midpoint of the central C-C bond. The 4,4'-bipyridyl ligand links the Cu(II) atoms into a linear chain along the b axis. O-H⋯O hydrogen-bonding inter-actions between the cationic chains and the tetra-fluorido-succinate anions and the free water mol-ecules generate a three-dimensional supra-molecular network.

Entities:  

Year:  2012        PMID: 22590105      PMCID: PMC3344339          DOI: 10.1107/S1600536812014948

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to metal-organic framework structures, see: Allendorf et al. (2009 ▶). For the construction of hybrid frameworks with perfluorinated ligands, see: Yang et al. (2007 ▶); Hulvey et al. (2009 ▶).

Experimental

Crystal data

[Cu(C10H8N2)(H2O)4](C4F4O4)·4H2O M = 551.89 Monoclinic, a = 17.112 (3) Å b = 11.135 (2) Å c = 12.126 (2) Å β = 104.85 (3)° V = 2233.3 (7) Å3 Z = 4 Mo Kα radiation μ = 1.07 mm−1 T = 298 K 0.44 × 0.22 × 0.10 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.650, T max = 0.900 10662 measured reflections 2546 independent reflections 2115 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.085 S = 1.28 2546 reflections 153 parameters H-atom parameters constrained Δρmax = 0.70 e Å−3 Δρmin = −0.78 e Å−3 Data collection: SMART (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812014948/mw2062sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812014948/mw2062Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C10H8N2)(H2O)4](C4F4O4)·4H2OF(000) = 1132
Mr = 551.89Dx = 1.641 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 8384 reflections
a = 17.112 (3) Åθ = 3.0–27.4°
b = 11.135 (2) ŵ = 1.07 mm1
c = 12.126 (2) ÅT = 298 K
β = 104.85 (3)°Block, blue
V = 2233.3 (7) Å30.44 × 0.22 × 0.10 mm
Z = 4
Bruker SMART APEX diffractometer2546 independent reflections
Radiation source: fine-focus sealed tube2115 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 28 pixels mm-1θmax = 27.4°, θmin = 3.0°
ω scansh = −22→21
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −14→14
Tmin = 0.650, Tmax = 0.900l = −15→15
10662 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H-atom parameters constrained
wR(F2) = 0.085w = 1/[σ2(Fo2) + (0.0175P)2 + 4.9756P] where P = (Fo2 + 2Fc2)/3
S = 1.28(Δ/σ)max = 0.001
2546 reflectionsΔρmax = 0.70 e Å3
153 parametersΔρmin = −0.78 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0077 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.87438 (3)0.75000.02173 (14)
F10.33513 (10)0.31057 (16)0.46607 (16)0.0488 (5)
F20.29291 (11)0.33959 (16)0.61875 (14)0.0457 (4)
O10.43960 (11)0.87146 (15)0.58758 (13)0.0277 (4)
H30.41540.80890.56640.033*
H40.40870.92850.56800.033*
O20.16201 (13)0.45430 (18)0.49626 (16)0.0426 (5)
O30.20898 (16)0.4317 (2)0.34192 (18)0.0559 (7)
O40.36711 (11)0.88591 (16)0.79355 (15)0.0307 (4)
H70.35790.89680.85610.037*
H80.34480.93990.75030.037*
O50.35115 (14)0.6752 (2)0.5062 (2)0.0533 (6)
H90.32620.66100.55420.064*
H100.31970.70050.44790.064*
O60.23890 (14)0.7923 (2)0.32616 (18)0.0540 (6)
H120.25300.84070.28430.065*
H110.21130.73970.28740.065*
N10.50000.6931 (2)0.75000.0212 (6)
N20.50000.0563 (2)0.75000.0231 (6)
C10.45882 (16)0.6311 (2)0.8111 (2)0.0296 (5)
H10.43010.67310.85410.035*
C20.45722 (17)0.5067 (2)0.8129 (2)0.0315 (6)
H20.42760.46680.85610.038*
C30.50000.4417 (3)0.75000.0244 (7)
C40.50000.3076 (3)0.75000.0246 (7)
C50.48432 (17)0.2427 (2)0.8399 (2)0.0298 (6)
H50.47370.28270.90190.036*
C60.48451 (16)0.1187 (2)0.8369 (2)0.0277 (5)
H60.47350.07660.89750.033*
C70.26765 (16)0.3133 (2)0.5056 (2)0.0339 (6)
C80.20728 (18)0.4103 (2)0.4409 (2)0.0363 (6)
U11U22U33U12U13U23
Cu10.0336 (3)0.01019 (19)0.0216 (2)0.0000.00738 (16)0.000
F10.0408 (10)0.0482 (10)0.0676 (12)0.0108 (8)0.0323 (9)0.0130 (9)
F20.0502 (10)0.0491 (10)0.0327 (8)0.0104 (8)0.0014 (7)0.0004 (7)
O10.0379 (10)0.0199 (8)0.0241 (8)0.0054 (7)0.0058 (7)0.0010 (7)
O20.0532 (13)0.0414 (11)0.0369 (10)0.0262 (10)0.0185 (9)0.0090 (9)
O30.0837 (17)0.0539 (14)0.0366 (11)0.0379 (13)0.0276 (11)0.0198 (10)
O40.0366 (10)0.0288 (9)0.0296 (9)0.0033 (8)0.0135 (7)0.0058 (7)
O50.0492 (13)0.0590 (14)0.0498 (13)−0.0107 (11)0.0090 (10)−0.0077 (11)
O60.0659 (15)0.0598 (14)0.0361 (11)−0.0240 (12)0.0125 (10)−0.0009 (10)
N10.0260 (14)0.0129 (12)0.0245 (13)0.0000.0063 (11)0.000
N20.0333 (16)0.0125 (12)0.0273 (14)0.0000.0145 (12)0.000
C10.0395 (14)0.0167 (11)0.0392 (13)0.0029 (10)0.0224 (11)−0.0002 (10)
C20.0433 (16)0.0166 (11)0.0427 (14)−0.0001 (10)0.0260 (12)0.0033 (10)
C30.0317 (18)0.0126 (14)0.0307 (17)0.0000.0115 (14)0.000
C40.0319 (18)0.0121 (14)0.0325 (17)0.0000.0130 (14)0.000
C50.0484 (16)0.0163 (11)0.0303 (13)−0.0009 (10)0.0206 (11)−0.0027 (9)
C60.0429 (15)0.0178 (11)0.0282 (12)0.0002 (10)0.0194 (11)0.0016 (9)
C70.0338 (14)0.0386 (15)0.0323 (13)0.0102 (12)0.0140 (11)0.0063 (11)
C80.0484 (17)0.0291 (13)0.0312 (13)0.0147 (12)0.0101 (12)0.0082 (11)
Cu1—O1i1.9760 (17)N1—C11.338 (3)
Cu1—O11.9761 (17)N2—C61.344 (3)
Cu1—N12.018 (3)N2—C6i1.344 (3)
Cu1—N2ii2.025 (3)N2—Cu1iii2.025 (3)
F1—C71.360 (3)C1—C21.386 (3)
F2—C71.360 (3)C1—H10.9300
O1—H30.8180C2—C31.388 (3)
O1—H40.8212C2—H20.9300
O2—C81.248 (3)C3—C2i1.388 (3)
O3—C81.232 (3)C3—C41.494 (4)
O4—H70.8224C4—C51.390 (3)
O4—H80.8241C4—C5i1.390 (3)
O5—H90.8196C5—C61.382 (3)
O5—H100.8200C5—H50.9300
O6—H120.8182C6—H60.9300
O6—H110.8207C7—C7iv1.525 (6)
N1—C1i1.338 (3)C7—C81.560 (4)
O1i—Cu1—O1178.11 (10)C3—C2—H2120.1
O1i—Cu1—N189.06 (5)C2—C3—C2i117.2 (3)
O1—Cu1—N189.06 (5)C2—C3—C4121.38 (15)
O1i—Cu1—N2ii90.94 (5)C2i—C3—C4121.38 (15)
O1—Cu1—N2ii90.94 (5)C5—C4—C5i117.4 (3)
N1—Cu1—N2ii180.000 (1)C5—C4—C3121.31 (15)
Cu1—O1—H3114.9C5i—C4—C3121.30 (15)
Cu1—O1—H4114.1C6—C5—C4119.8 (2)
H3—O1—H4109.3C6—C5—H5120.1
H7—O4—H8108.2C4—C5—H5120.1
H9—O5—H10109.4N2—C6—C5122.6 (2)
H12—O6—H11109.5N2—C6—H6118.7
C1i—N1—C1117.8 (3)C5—C6—H6118.7
C1i—N1—Cu1121.09 (14)F1—C7—F2106.3 (2)
C1—N1—Cu1121.09 (14)F1—C7—C7iv107.5 (3)
C6—N2—C6i117.8 (3)F2—C7—C7iv107.8 (3)
C6—N2—Cu1iii121.12 (14)F1—C7—C8110.5 (2)
C6i—N2—Cu1iii121.12 (14)F2—C7—C8110.9 (2)
N1—C1—C2122.7 (2)C7iv—C7—C8113.5 (3)
N1—C1—H1118.7O3—C8—O2128.4 (3)
C2—C1—H1118.7O3—C8—C7116.5 (2)
C1—C2—C3119.8 (2)O2—C8—C7115.1 (2)
C1—C2—H2120.1
D—H···AD—HH···AD···AD—H···A
O6—H11···O4v0.822.012.826 (3)172
O6—H12···O3vi0.822.072.879 (3)168
O5—H10···O60.822.022.830 (3)168
O5—H9···O6v0.822.112.871 (3)155
O4—H8···O3v0.821.902.725 (3)176
O4—H7···O2vii0.822.012.824 (3)170
O1—H4···O2v0.821.812.630 (2)172
O1—H3···O50.821.882.697 (3)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H11⋯O4i0.822.012.826 (3)172
O6—H12⋯O3ii0.822.072.879 (3)168
O5—H10⋯O60.822.022.830 (3)168
O5—H9⋯O6i0.822.112.871 (3)155
O4—H8⋯O3i0.821.902.725 (3)176
O4—H7⋯O2iii0.822.012.824 (3)170
O1—H4⋯O2i0.821.812.630 (2)172
O1—H3⋯O50.821.882.697 (3)174

Symmetry codes: (i) ; (ii) ; (iii) .

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