Literature DB >> 22590093

Bis[μ-N-(2-oxidobenzyl-idene)pyridine-2-carbohydrazidato]bis-[chlorido(methanol-κO)erbium(III)].

Hua Yang1.   

Abstract

In the binuclear title complex, [Er(2)(C(13)H(9)N(3)O(2))(2)Cl(2)(CH(3)OH)(2)], the entire mol-ecule is generated by the application of inversion symmetry. Each Er(III) ion is seven-coordinated by two O atoms and one N atom from one N-(2-oxidobenzyl-idene)pyridine-2-carbohydrazidate (L(2-)) ligand, one O atom and one N atom from the symmetry-related L(2-) ligand, one O atom of a methanol mol-ecule and one chloride anion. The coordination geometry is based on a pseudo-penta-gonal bipyramid. Linear supra-molecular chains along [010] are formed in the crystal packing through O-H⋯Cl hydrogen bonds.

Entities:  

Year:  2012        PMID: 22590093      PMCID: PMC3344327          DOI: 10.1107/S1600536812013979

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For complexes containing salicyl­aldehyde-2-pyridine­carboxyl-hydrazone and related ligands, see: Guo et al. (2011a ▶,b ▶); Bai et al. (2005 ▶, 2006 ▶); Wu et al. (2004 ▶); Milway et al. (2003 ▶). For the mechanism of the hydrolysis of salicyl­aldehyde thio­semicarbazone, see: Narang & Aggarwal (1974 ▶).

Experimental

Crystal data

[Er2(C13H9N3O2)2Cl2(CH4O)2] M = 947.97 Monoclinic, a = 9.5810 (4) Å b = 7.0906 (3) Å c = 22.3504 (8) Å β = 96.920 (3)° V = 1507.31 (10) Å3 Z = 2 Mo Kα radiation μ = 5.76 mm−1 T = 128 K 0.15 × 0.13 × 0.12 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 2000 ▶) T min = 0.479, T max = 0.545 14182 measured reflections 3732 independent reflections 2931 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.059 S = 0.99 3732 reflections 200 parameters H-atom parameters constrained Δρmax = 1.25 e Å−3 Δρmin = −0.71 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812013979/tk5069sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812013979/tk5069Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Er2(C13H9N3O2)2Cl2(CH4O)2]F(000) = 908
Mr = 947.97Dx = 2.089 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4466 reflections
a = 9.5810 (4) Åθ = 2.7–28.1°
b = 7.0906 (3) ŵ = 5.76 mm1
c = 22.3504 (8) ÅT = 128 K
β = 96.920 (3)°Block, yellow
V = 1507.31 (10) Å30.15 × 0.13 × 0.12 mm
Z = 2
Bruker SMART CCD diffractometer3732 independent reflections
Radiation source: fine-focus sealed tube2931 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
φ scans and ω scansθmax = 28.3°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker 2000)h = −12→11
Tmin = 0.479, Tmax = 0.545k = −9→9
14182 measured reflectionsl = −29→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.059H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0299P)2] where P = (Fo2 + 2Fc2)/3
3732 reflections(Δ/σ)max = 0.004
200 parametersΔρmax = 1.25 e Å3
0 restraintsΔρmin = −0.71 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Er10.372121 (17)0.91591 (3)0.432040 (7)0.02740 (6)
O20.5836 (3)1.0615 (4)0.46548 (11)0.0323 (6)
O30.2988 (3)1.2290 (5)0.42893 (15)0.0526 (8)
H70.35911.31500.45210.063*
C50.6425 (4)1.0757 (5)0.36561 (16)0.0289 (8)
Cl10.48595 (13)0.58790 (16)0.42195 (5)0.0476 (3)
N10.5108 (3)1.0104 (5)0.34970 (14)0.0282 (7)
O10.1993 (3)0.8698 (4)0.36235 (12)0.0386 (7)
C140.0511 (4)0.7742 (6)0.46482 (18)0.0366 (9)
H14−0.01220.74980.49350.044*
C80.0727 (4)0.7952 (5)0.35398 (17)0.0306 (9)
C60.6814 (4)1.1036 (5)0.43082 (17)0.0287 (8)
N30.1753 (3)0.8294 (5)0.48577 (14)0.0308 (7)
N40.8066 (3)1.1581 (5)0.45048 (14)0.0344 (8)
C10.4695 (4)0.9753 (6)0.29156 (18)0.0343 (9)
H10.37650.93090.28020.041*
C40.7340 (4)1.1077 (6)0.32293 (18)0.0373 (10)
H40.82571.15590.33470.045*
C10−0.1348 (5)0.6619 (7)0.3905 (2)0.0435 (11)
H10−0.18580.63130.42300.052*
C12−0.1223 (5)0.6715 (7)0.2860 (2)0.0440 (11)
H12−0.16250.64470.24590.053*
C9−0.0018 (4)0.7457 (6)0.40305 (17)0.0332 (8)
C30.6899 (5)1.0688 (6)0.26356 (19)0.0413 (10)
H30.75131.08860.23380.050*
C130.0074 (4)0.7590 (6)0.29574 (18)0.0366 (9)
H130.05320.79540.26210.044*
C20.5561 (5)1.0008 (7)0.24736 (18)0.0393 (10)
H20.52410.97210.20650.047*
C11−0.1934 (5)0.6230 (7)0.3332 (2)0.0499 (12)
H11−0.28250.56290.32620.060*
C70.1756 (6)1.3080 (8)0.3970 (3)0.0722 (17)
H7A0.10781.20750.38500.108*
H7B0.20001.37280.36090.108*
H7C0.13411.39850.42290.108*
U11U22U33U12U13U23
Er10.02276 (9)0.03156 (11)0.02796 (10)−0.00645 (8)0.00334 (6)−0.00213 (8)
O20.0269 (13)0.0435 (18)0.0273 (14)−0.0087 (12)0.0062 (10)−0.0013 (12)
O30.0461 (19)0.0366 (19)0.073 (2)0.0010 (15)−0.0021 (15)−0.0050 (17)
C50.0294 (18)0.027 (2)0.0304 (19)−0.0045 (16)0.0041 (15)0.0008 (17)
Cl10.0544 (7)0.0371 (6)0.0535 (7)0.0029 (5)0.0145 (5)0.0048 (5)
N10.0286 (16)0.0276 (17)0.0285 (17)−0.0043 (13)0.0038 (13)−0.0008 (14)
O10.0266 (14)0.054 (2)0.0347 (16)−0.0102 (13)0.0012 (11)−0.0015 (13)
C140.0283 (19)0.042 (3)0.040 (2)−0.0070 (18)0.0065 (16)−0.003 (2)
C80.0251 (18)0.032 (2)0.034 (2)0.0003 (15)−0.0017 (15)−0.0056 (17)
C60.0285 (19)0.031 (2)0.0273 (19)−0.0042 (16)0.0040 (14)−0.0006 (16)
N30.0264 (16)0.0361 (19)0.0299 (17)−0.0075 (14)0.0033 (13)−0.0026 (14)
N40.0288 (17)0.046 (2)0.0289 (18)−0.0093 (15)0.0066 (14)−0.0029 (15)
C10.035 (2)0.038 (3)0.029 (2)−0.0038 (17)0.0004 (16)0.0010 (18)
C40.032 (2)0.045 (3)0.035 (2)−0.0083 (19)0.0059 (16)0.003 (2)
C100.035 (2)0.048 (3)0.046 (3)−0.012 (2)0.0013 (19)−0.002 (2)
C120.036 (2)0.047 (3)0.046 (3)−0.003 (2)−0.0083 (19)−0.011 (2)
C90.0263 (18)0.036 (2)0.036 (2)−0.0036 (18)0.0003 (15)−0.0054 (19)
C30.041 (2)0.049 (3)0.036 (2)0.002 (2)0.0135 (18)0.005 (2)
C130.033 (2)0.040 (2)0.036 (2)0.0003 (19)0.0012 (16)−0.006 (2)
C20.044 (2)0.047 (3)0.026 (2)0.000 (2)−0.0002 (18)0.0001 (19)
C110.037 (2)0.050 (3)0.060 (3)−0.018 (2)−0.007 (2)−0.005 (2)
C70.069 (4)0.058 (4)0.088 (4)0.019 (3)0.003 (3)0.013 (3)
Er1—O12.157 (3)C6—N41.286 (5)
Er1—O2i2.284 (3)N3—N4i1.417 (4)
Er1—O22.316 (3)N4—N3i1.417 (4)
Er1—O32.327 (3)C1—C21.376 (6)
Er1—N32.433 (3)C1—H10.9500
Er1—N12.488 (3)C4—C31.371 (6)
Er1—Cl12.5901 (12)C4—H40.9500
O2—C61.320 (4)C10—C111.362 (6)
O2—Er1i2.284 (3)C10—C91.403 (5)
O3—C71.419 (6)C10—H100.9500
O3—H70.9500C12—C111.369 (7)
C5—N11.351 (5)C12—C131.382 (6)
C5—C41.390 (5)C12—H120.9500
C5—C61.474 (5)C3—C21.377 (6)
N1—C11.335 (5)C3—H30.9500
O1—C81.316 (4)C13—H130.9500
C14—N31.286 (5)C2—H20.9500
C14—C91.427 (5)C11—H110.9500
C14—H140.9500C7—H7A0.9800
C8—C131.398 (5)C7—H7B0.9800
C8—C91.423 (5)C7—H7C0.9800
O1—Er1—O2i140.21 (10)O1—C8—C13120.5 (4)
O1—Er1—O2149.99 (10)O1—C8—C9122.0 (3)
O2i—Er1—O266.16 (10)C13—C8—C9117.5 (3)
O1—Er1—O385.42 (12)N4—C6—O2124.5 (3)
O2i—Er1—O388.97 (11)N4—C6—C5119.5 (3)
O2—Er1—O380.42 (11)O2—C6—C5115.9 (3)
O1—Er1—N375.24 (10)C14—N3—N4i112.4 (3)
O2i—Er1—N365.42 (10)C14—N3—Er1129.4 (3)
O2—Er1—N3130.77 (10)N4i—N3—Er1118.2 (2)
O3—Er1—N390.34 (11)C6—N4—N3i111.0 (3)
O1—Er1—N186.47 (10)N1—C1—C2122.7 (4)
O2i—Er1—N1132.20 (10)N1—C1—H1118.6
O2—Er1—N166.06 (9)C2—C1—H1118.6
O3—Er1—N184.69 (11)C3—C4—C5119.0 (4)
N3—Er1—N1161.38 (11)C3—C4—H4120.5
O1—Er1—Cl195.50 (9)C5—C4—H4120.5
O2i—Er1—Cl196.94 (7)C11—C10—C9122.4 (4)
O2—Er1—Cl193.86 (7)C11—C10—H10118.8
O3—Er1—Cl1169.37 (9)C9—C10—H10118.8
N3—Er1—Cl1100.15 (8)C11—C12—C13120.8 (4)
N1—Er1—Cl184.80 (8)C11—C12—H12119.6
O1—Er1—Er1i167.32 (8)C13—C12—H12119.6
O2i—Er1—Er1i33.34 (6)C10—C9—C8118.5 (4)
O2—Er1—Er1i32.82 (6)C10—C9—C14117.5 (4)
O3—Er1—Er1i83.65 (8)C8—C9—C14123.9 (3)
N3—Er1—Er1i98.39 (7)C4—C3—C2119.6 (4)
N1—Er1—Er1i98.87 (7)C4—C3—H3120.2
Cl1—Er1—Er1i96.43 (3)C2—C3—H3120.2
C6—O2—Er1i120.9 (2)C12—C13—C8121.5 (4)
C6—O2—Er1124.5 (2)C12—C13—H13119.3
Er1i—O2—Er1113.84 (10)C8—C13—H13119.3
C7—O3—Er1128.4 (3)C1—C2—C3118.7 (4)
C7—O3—H7115.8C1—C2—H2120.7
Er1—O3—H7115.8C3—C2—H2120.7
N1—C5—C4121.5 (4)C10—C11—C12119.2 (4)
N1—C5—C6115.0 (3)C10—C11—H11120.4
C4—C5—C6123.5 (3)C12—C11—H11120.4
C1—N1—C5118.5 (3)O3—C7—H7A109.5
C1—N1—Er1123.2 (3)O3—C7—H7B109.5
C5—N1—Er1117.6 (2)H7A—C7—H7B109.5
C8—O1—Er1141.0 (2)O3—C7—H7C109.5
N3—C14—C9126.9 (4)H7A—C7—H7C109.5
N3—C14—H14116.5H7B—C7—H7C109.5
C9—C14—H14116.5
D—H···AD—HH···AD···AD—H···A
O3—H7···Cl1ii0.952.423.128 (4)131
Table 1

Selected bond lengths (Å)

Er1—O12.157 (3)
Er1—O2i2.284 (3)
Er1—O22.316 (3)
Er1—O32.327 (3)
Er1—N32.433 (3)
Er1—N12.488 (3)
Er1—Cl12.5901 (12)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H7⋯Cl1ii0.952.423.128 (4)131

Symmetry code: (ii) .

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