Literature DB >> 22590069

Dichloridobis(pyrazine-2-carboxamide-κN(4))zinc(II).

Sadif A Shirvan1, Sara Haydari Dezfuli.   

Abstract

In the crystal of the title compound, [ZnCl(2)(C(5)n class="Species">H(5)N(3)O)(2)], the mol-ecule has m symmetry, with the Zn(II) cation and Cl(-) anions located on the mirror plane. The Zn(II) cation is coordinated by two Cl(-) anions and two pyrazine-2-carboxamide ligands in a distorted ZnCl(2)N(2) tetra-hedral geometry. The two pyrazine rings are nearly perpendicular to each other [dihedral angle = 86.61 (10)°]. Inter-molecular N-H⋯O and N-H⋯N hydrogen bonds and weak C-H⋯O inter-actions stabilize the crystal packing.

Entities:  

Year:  2012        PMID: 22590069      PMCID: PMC3344303          DOI: 10.1107/S1600536812013888

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Abu-Youssef et al. (2006 ▶); Azhdari Tehrani et al. (2010 ▶); Goher & Mautner (2000 ▶); Kristiansson (2002 ▶); Mir Mohammad Sadegh et al. (2010 ▶); Munakata et al. (1997 ▶); Pacigova et al. (2008 ▶).

Experimental

Crystal data

[ZnCl2(C5n class="Species">H5N3O)2] M = 382.53 Monoclinic, a = 5.4296 (5) Å b = 19.7629 (14) Å c = 6.8396 (5) Å β = 105.131 (7)° V = 708.48 (10) Å3 Z = 2 Mo Kα radiation μ = 2.12 mm−1 T = 298 K 0.40 × 0.06 × 0.05 mm

Data collection

Bruker APEXII CCD area-detector’ diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.881, T max = 0.902 5777 measured reflections 1441 independent reflections 1064 reflections with I > 2σ(I) R int = 0.085

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.093 S = 0.97 1441 reflections 100 parameters H-atom parameters constrained Δρmax = 0.78 e Å−3 Δρmin = −0.65 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812013888/xu5500sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812013888/xu5500Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnCl2(C5H5N3O)2]F(000) = 384
Mr = 382.53Dx = 1.793 Mg m3
Monoclinic, P21/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybCell parameters from 5777 reflections
a = 5.4296 (5) Åθ = 2.1–26.0°
b = 19.7629 (14) ŵ = 2.12 mm1
c = 6.8396 (5) ÅT = 298 K
β = 105.131 (7)°Plate, colorless
V = 708.48 (10) Å30.40 × 0.06 × 0.05 mm
Z = 2
Bruker APEXII CCD area-detector' diffractometer1441 independent reflections
Radiation source: fine-focus sealed tube1064 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.085
ω scansθmax = 26.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −6→6
Tmin = 0.881, Tmax = 0.902k = −21→24
5777 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H-atom parameters constrained
S = 0.97w = 1/[σ2(Fo2) + (0.0467P)2] where P = (Fo2 + 2Fc2)/3
1441 reflections(Δ/σ)max = 0.003
100 parametersΔρmax = 0.78 e Å3
0 restraintsΔρmin = −0.65 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3963 (7)0.3616 (2)0.4810 (6)0.0307 (9)
H10.25830.35120.37240.037*
C20.6226 (8)0.3464 (2)0.8085 (6)0.0364 (10)
H20.64350.32620.93470.044*
C30.8016 (8)0.3930 (2)0.7802 (6)0.0391 (10)
H30.94280.40220.88730.047*
C40.5722 (7)0.4094 (2)0.4563 (6)0.0310 (8)
C50.5370 (8)0.4445 (2)0.2579 (6)0.0366 (9)
N10.4213 (6)0.33021 (16)0.6574 (5)0.0312 (7)
N20.7776 (6)0.42473 (18)0.6048 (5)0.0366 (8)
N30.7336 (7)0.4801 (2)0.2331 (6)0.0535 (11)
H3B0.72100.50220.12260.064*
H3C0.87360.48120.32760.064*
O10.3309 (6)0.44069 (17)0.1293 (4)0.0506 (8)
Zn10.18582 (12)0.25000.69002 (10)0.0304 (2)
Cl10.1855 (3)0.25001.0108 (2)0.0480 (4)
Cl2−0.1427 (3)0.25000.4244 (2)0.0416 (4)
U11U22U33U12U13U23
C10.0264 (19)0.030 (2)0.034 (2)−0.0008 (16)0.0050 (17)0.0030 (17)
C20.040 (2)0.038 (2)0.028 (2)−0.0004 (18)0.0041 (18)0.0030 (18)
C30.036 (2)0.046 (3)0.030 (2)−0.0092 (19)−0.0004 (18)0.0013 (19)
C40.0278 (19)0.030 (2)0.034 (2)−0.0010 (16)0.0063 (16)−0.0002 (17)
C50.041 (2)0.031 (2)0.036 (2)−0.0065 (18)0.0050 (19)0.0002 (18)
N10.0300 (16)0.0295 (18)0.0341 (19)−0.0027 (14)0.0081 (14)−0.0011 (14)
N20.0325 (18)0.037 (2)0.037 (2)−0.0053 (14)0.0032 (15)−0.0011 (15)
N30.041 (2)0.073 (3)0.042 (2)−0.0229 (19)0.0026 (17)0.017 (2)
O10.0432 (17)0.058 (2)0.0413 (18)−0.0198 (15)−0.0053 (15)0.0173 (16)
Zn10.0290 (3)0.0313 (4)0.0329 (4)0.0000.0114 (3)0.000
Cl10.0570 (10)0.0575 (11)0.0328 (8)0.0000.0174 (7)0.000
Cl20.0303 (7)0.0525 (10)0.0408 (8)0.0000.0069 (6)0.000
C1—N11.332 (5)C5—O11.232 (5)
C1—C41.384 (5)C5—N31.326 (5)
C1—H10.9300N1—Zn12.085 (3)
C2—N11.333 (5)N3—H3B0.8600
C2—C31.388 (6)N3—H3C0.8600
C2—H20.9300Zn1—N12.085 (3)
C3—N21.330 (5)Zn1—N1i2.085 (3)
C3—H30.9300Zn1—Cl12.1945 (16)
C4—N21.333 (5)Zn1—Cl22.1888 (16)
C4—C51.491 (6)
N1—C1—C4121.2 (4)N3—C5—C4116.6 (4)
N1—C1—H1119.4C1—N1—C2117.4 (3)
C4—C1—H1119.4C1—N1—Zn1122.1 (3)
N1—C2—C3120.9 (4)C2—N1—Zn1120.1 (3)
N1—C2—H2119.6C3—N2—C4116.4 (3)
C3—C2—H2119.6C5—N3—H3B120.0
N2—C3—C2122.1 (4)C5—N3—H3C120.0
N2—C3—H3118.9H3B—N3—H3C120.0
C2—C3—H3118.9N1—Zn1—N1i99.00 (18)
N2—C4—C1121.9 (4)N1—Zn1—Cl2107.51 (10)
N2—C4—C5118.1 (3)N1i—Zn1—Cl2107.51 (10)
C1—C4—C5120.0 (3)N1—Zn1—Cl1105.53 (9)
O1—C5—N3123.5 (4)N1i—Zn1—Cl1105.53 (9)
O1—C5—C4119.9 (4)Cl2—Zn1—Cl1128.07 (6)
N1—C2—C3—N21.9 (7)C3—C2—N1—Zn1170.7 (3)
N1—C1—C4—N22.1 (6)C2—C3—N2—C4−0.2 (6)
N1—C1—C4—C5−179.0 (4)C1—C4—N2—C3−1.7 (6)
N2—C4—C5—O1−167.5 (4)C5—C4—N2—C3179.4 (4)
C1—C4—C5—O113.5 (6)C1—N1—Zn1—N1i96.5 (3)
N2—C4—C5—N310.8 (6)C2—N1—Zn1—N1i−75.5 (3)
C1—C4—C5—N3−168.2 (4)C1—N1—Zn1—Cl2−15.2 (3)
C4—C1—N1—C2−0.3 (6)C2—N1—Zn1—Cl2172.9 (3)
C4—C1—N1—Zn1−172.5 (3)C1—N1—Zn1—Cl1−154.6 (3)
C3—C2—N1—C1−1.5 (6)C2—N1—Zn1—Cl133.5 (3)
D—H···AD—HH···AD···AD—H···A
N3—H3B···O1ii0.862.022.875 (5)175
N3—H3C···N2iii0.862.613.205 (5)128
C3—H3···O1iv0.932.443.357 (5)170
Table 1

Selected bond lengths (Å)

Zn1—N12.085 (3)
Zn1—Cl12.1945 (16)
Zn1—Cl22.1888 (16)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3B⋯O1i0.862.022.875 (5)175
N3—H3C⋯N2ii0.862.613.205 (5)128
C3—H3⋯O1iii0.932.443.357 (5)170

Symmetry codes: (i) ; (ii) ; (iii) .

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