Literature DB >> 22590041

Bis-(guanidinium) naphthalene-1,5-di-sulfonate-18-crown-6 (1/1).

Bin Wei1.   

Abstract

In the crystal of the title compound, 2CH(6)N(3) (+)·C(10)H(6)O(6)S(2) (2-)·C(12)H(24)O(6), the 1,5-naphthnalenedisulfonate anion and the 18-crown-6 mol-ecule lie across inversion centers. The guanidin-ium cation links with the 1,5-naphthnalenedisulfonate anion and 18-crown-6 mol-ecule via N-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22590041      PMCID: PMC3343960          DOI: 10.1107/S1600536812009154

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of crown ethers, see: Clark et al. (1998 ▶). The title compound was obtained during a search for new hydrogen-bonding-type dielectric materials. For ferroelectric metal-organic 18-crown-6 clathrates, see: Fu et al. (2009 ▶, 2011 ▶); Ye et al. (2006 ▶); Zhang et al. (2008 ▶, 2010 ▶).

Experimental

Crystal data

2CH6N3 +·C10H6O6S2 −·C12H24O6 M = 670.76 Triclinic, a = 8.5275 (17) Å b = 9.1291 (18) Å c = 11.470 (2) Å α = 111.97 (3)° β = 96.10 (3)° γ = 99.38 (3)° V = 803.3 (3) Å3 Z = 1 Mo Kα radiation μ = 0.23 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer 8245 measured reflections 3638 independent reflections 3070 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.104 S = 1.05 3638 reflections 223 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.46 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, Global. DOI: 10.1107/S1600536812009154/xu5475sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009154/xu5475Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812009154/xu5475Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2CH6N3+·C10H6O6S2·C12H24O6Z = 1
Mr = 670.76F(000) = 356
Triclinic, P1Dx = 1.387 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5275 (17) ÅCell parameters from 3638 reflections
b = 9.1291 (18) Åθ = 3.0–27.5°
c = 11.470 (2) ŵ = 0.23 mm1
α = 111.97 (3)°T = 293 K
β = 96.10 (3)°Block, colorless
γ = 99.38 (3)°0.20 × 0.20 × 0.20 mm
V = 803.3 (3) Å3
Rigaku SCXmini diffractometer3070 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.025
Graphite monochromatorθmax = 27.4°, θmin = 3.1°
CCD_Profile_fitting scansh = −11→10
8245 measured reflectionsk = −11→11
3638 independent reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0379P)2 + 0.3633P] where P = (Fo2 + 2Fc2)/3
3638 reflections(Δ/σ)max < 0.001
223 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.11339 (5)0.65053 (5)0.31289 (4)0.03167 (13)
O30.09429 (17)0.50066 (14)0.33254 (12)0.0414 (3)
O40.63864 (17)−0.01790 (16)0.23799 (13)0.0459 (3)
O50.47238 (18)0.22644 (16)0.24927 (13)0.0490 (4)
C30.02394 (19)0.78364 (18)0.43259 (15)0.0277 (3)
O60.40620 (17)0.26914 (16)0.01217 (13)0.0468 (3)
C40.03593 (18)0.94983 (18)0.45050 (15)0.0263 (3)
C1−0.1274 (2)0.8214 (2)0.60430 (18)0.0387 (4)
H1−0.18210.77820.65410.046*
O10.28092 (17)0.73046 (16)0.33171 (17)0.0608 (5)
C2−0.0571 (2)0.7217 (2)0.50692 (17)0.0345 (4)
H2−0.06580.61340.49310.041*
O20.0209 (2)0.62768 (18)0.19082 (13)0.0574 (4)
C120.7991 (2)0.1911 (2)0.04975 (18)0.0415 (4)
N30.8556 (3)0.2086 (3)0.16648 (19)0.0569 (5)
C50.1159 (2)1.0194 (2)0.37412 (17)0.0349 (4)
H50.16110.95500.30850.042*
N20.6973 (3)0.0547 (2)−0.0292 (2)0.0626 (6)
C80.5725 (3)0.2333 (3)0.35990 (19)0.0539 (5)
H8A0.53190.29120.43610.065*
H8B0.68200.29030.36720.065*
C110.3022 (3)0.2636 (3)−0.0967 (2)0.0532 (5)
H11A0.29550.3727−0.08650.064*
H11B0.19430.2037−0.10340.064*
C90.4799 (3)0.3797 (2)0.2418 (2)0.0575 (6)
H9A0.58780.42170.23260.069*
H9B0.45630.45580.31970.069*
C70.5717 (3)0.0633 (3)0.34750 (19)0.0493 (5)
H7A0.63510.06550.42380.059*
H7B0.46190.00580.33820.059*
C60.6336 (3)−0.1836 (3)0.2156 (2)0.0501 (5)
H6A0.5231−0.23930.20660.060*
H6B0.6981−0.18980.28790.060*
N10.8482 (3)0.3087 (3)0.0127 (2)0.0653 (6)
C100.3593 (3)0.3611 (3)0.1293 (2)0.0552 (6)
H10A0.25370.30700.13340.066*
H10B0.35200.46720.13180.066*
H200.928 (3)0.299 (3)0.219 (2)0.066 (7)*
H210.819 (3)0.142 (3)0.193 (2)0.065 (8)*
H250.903 (3)0.399 (3)0.065 (3)0.074 (9)*
H220.670 (3)−0.012 (3)0.000 (3)0.070 (9)*
H240.829 (3)0.289 (3)−0.057 (3)0.059 (8)*
H230.659 (4)0.047 (4)−0.099 (3)0.094 (11)*
U11U22U33U12U13U23
S10.0417 (2)0.0225 (2)0.0323 (2)0.00950 (16)0.01195 (17)0.01017 (16)
O30.0617 (9)0.0267 (6)0.0411 (7)0.0161 (6)0.0153 (6)0.0150 (5)
O40.0520 (8)0.0399 (7)0.0458 (8)0.0041 (6)0.0122 (6)0.0188 (6)
O50.0553 (9)0.0386 (7)0.0412 (7)0.0067 (6)−0.0003 (6)0.0068 (6)
C30.0293 (8)0.0254 (8)0.0291 (8)0.0073 (6)0.0054 (6)0.0108 (6)
O60.0498 (8)0.0426 (7)0.0513 (8)0.0232 (6)0.0100 (6)0.0168 (6)
C40.0264 (8)0.0250 (7)0.0294 (8)0.0065 (6)0.0055 (6)0.0126 (6)
C10.0454 (10)0.0369 (9)0.0487 (11)0.0129 (8)0.0237 (9)0.0279 (8)
O10.0477 (8)0.0351 (7)0.0928 (12)0.0100 (6)0.0374 (8)0.0111 (7)
C20.0409 (9)0.0260 (8)0.0425 (10)0.0091 (7)0.0125 (8)0.0182 (7)
O20.0952 (12)0.0506 (8)0.0305 (7)0.0300 (8)0.0092 (7)0.0157 (6)
C120.0424 (10)0.0352 (9)0.0421 (10)0.0033 (8)0.0097 (8)0.0118 (8)
N30.0583 (12)0.0525 (11)0.0517 (11)−0.0154 (9)−0.0037 (9)0.0265 (10)
C50.0416 (10)0.0326 (9)0.0391 (9)0.0140 (7)0.0197 (8)0.0182 (7)
N20.0723 (14)0.0400 (11)0.0573 (13)−0.0042 (10)−0.0098 (11)0.0118 (10)
C80.0543 (13)0.0537 (13)0.0358 (11)0.0051 (10)0.0011 (9)0.0027 (9)
C110.0518 (12)0.0508 (12)0.0676 (14)0.0241 (10)0.0093 (11)0.0305 (11)
C90.0706 (15)0.0356 (10)0.0540 (13)0.0146 (10)0.0116 (11)0.0031 (9)
C70.0464 (11)0.0597 (13)0.0354 (10)0.0030 (10)0.0027 (9)0.0169 (9)
C60.0518 (12)0.0495 (12)0.0577 (13)0.0097 (9)0.0050 (10)0.0328 (10)
N10.0971 (18)0.0497 (12)0.0444 (12)−0.0041 (11)0.0146 (12)0.0215 (10)
C100.0662 (14)0.0402 (11)0.0608 (14)0.0278 (10)0.0200 (11)0.0133 (10)
S1—O11.4481 (15)C5—C1i1.365 (2)
S1—O31.4544 (12)C5—H50.9300
S1—O21.4556 (15)N2—H220.81 (3)
S1—C31.7943 (17)N2—H230.80 (3)
O4—C61.429 (2)C8—C71.504 (3)
O4—C71.430 (2)C8—H8A0.9700
O5—C91.425 (3)C8—H8B0.9700
O5—C81.427 (2)C11—C6ii1.496 (3)
C3—C21.372 (2)C11—H11A0.9700
C3—C41.437 (2)C11—H11B0.9700
O6—C101.431 (2)C9—C101.499 (3)
O6—C111.432 (2)C9—H9A0.9700
C4—C51.428 (2)C9—H9B0.9700
C4—C4i1.434 (3)C7—H7A0.9700
C1—C5i1.365 (2)C7—H7B0.9700
C1—C21.412 (2)C6—C11ii1.496 (3)
C1—H10.9300C6—H6A0.9700
C2—H20.9300C6—H6B0.9700
C12—N31.314 (3)N1—H250.84 (3)
C12—N11.319 (3)N1—H240.75 (3)
C12—N21.327 (3)C10—H10A0.9700
N3—H200.90 (3)C10—H10B0.9700
N3—H210.81 (3)
O1—S1—O3113.09 (9)O5—C8—H8B110.0
O1—S1—O2112.57 (11)C7—C8—H8B110.0
O3—S1—O2111.83 (9)H8A—C8—H8B108.3
O1—S1—C3107.06 (9)O6—C11—C6ii109.94 (16)
O3—S1—C3106.12 (8)O6—C11—H11A109.7
O2—S1—C3105.53 (8)C6ii—C11—H11A109.7
C6—O4—C7112.50 (15)O6—C11—H11B109.7
C9—O5—C8113.94 (16)C6ii—C11—H11B109.7
C2—C3—C4120.72 (15)H11A—C11—H11B108.2
C2—C3—S1117.84 (12)O5—C9—C10109.51 (17)
C4—C3—S1121.44 (12)O5—C9—H9A109.8
C10—O6—C11111.63 (15)C10—C9—H9A109.8
C5—C4—C4i118.55 (17)O5—C9—H9B109.8
C5—C4—C3122.97 (14)C10—C9—H9B109.8
C4i—C4—C3118.48 (17)H9A—C9—H9B108.2
C5i—C1—C2120.57 (15)O4—C7—C8109.21 (17)
C5i—C1—H1119.7O4—C7—H7A109.8
C2—C1—H1119.7C8—C7—H7A109.8
C3—C2—C1120.44 (15)O4—C7—H7B109.8
C3—C2—H2119.8C8—C7—H7B109.8
C1—C2—H2119.8H7A—C7—H7B108.3
N3—C12—N1119.0 (2)O4—C6—C11ii109.89 (17)
N3—C12—N2119.6 (2)O4—C6—H6A109.7
N1—C12—N2121.4 (2)C11ii—C6—H6A109.7
C12—N3—H20119.7 (16)O4—C6—H6B109.7
C12—N3—H21119.9 (18)C11ii—C6—H6B109.7
H20—N3—H21120 (2)H6A—C6—H6B108.2
C1i—C5—C4121.22 (16)C12—N1—H25120.7 (19)
C1i—C5—H5119.4C12—N1—H24116 (2)
C4—C5—H5119.4H25—N1—H24123 (3)
C12—N2—H22116.7 (19)O6—C10—C9110.54 (17)
C12—N2—H23119 (2)O6—C10—H10A109.5
H22—N2—H23124 (3)C9—C10—H10A109.5
O5—C8—C7108.65 (16)O6—C10—H10B109.5
O5—C8—H8A110.0C9—C10—H10B109.5
C7—C8—H8A110.0H10A—C10—H10B108.1
D—H···AD—HH···AD···AD—H···A
N1—H24···O2iii0.75 (3)2.36 (3)2.897 (3)131 (2)
N1—H25···O2iv0.84 (3)2.05 (3)2.887 (3)175 (3)
N2—H22···O6ii0.81 (3)2.28 (3)3.029 (3)154 (3)
N2—H23···O5ii0.80 (3)2.43 (3)2.867 (3)115 (3)
N3—H20···O3iv0.90 (3)2.01 (3)2.913 (3)179 (2)
N3—H21···O40.81 (3)2.18 (3)2.952 (3)159 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H24⋯O2i0.75 (3)2.36 (3)2.897 (3)131 (2)
N1—H25⋯O2ii0.84 (3)2.05 (3)2.887 (3)175 (3)
N2—H22⋯O6iii0.81 (3)2.28 (3)3.029 (3)154 (3)
N2—H23⋯O5iii0.80 (3)2.43 (3)2.867 (3)115 (3)
N3—H20⋯O3ii0.90 (3)2.01 (3)2.913 (3)179 (2)
N3—H21⋯O40.81 (3)2.18 (3)2.952 (3)159 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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