Literature DB >> 22589949

(2E)-1-(2,6-Dichloro-3-fluoro-phen-yl)-3-phenyl-prop-2-en-1-one.

Aletti S Praveen, Hemmige S Yathirajan, Badiadka Narayana, Thomas Gerber, Eric Hosten, Richard Betz.   

Abstract

In the title compound, C(15)H(9)Cl(2)FO, the F atom shows positional disorder over two positions, with site-occupancy factors of 0.747 (4) and 0.253 (4). The dihedral angle between the rings is 86.37 (10)°. In the crystal, C-H⋯O contacts connect the mol-ecules into chains along the c axis. The shortest inter-centroid distance between two aromatic systems is 3.6686 (12) Å and is apparent between the halogenated rings.

Entities:  

Year:  2012        PMID: 22589949      PMCID: PMC3344040          DOI: 10.1107/S1600536812010574

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pharmaceutical background to chalcones, see: Lin et al. (2002 ▶); Modzelewska et al. (2006 ▶); Svetaz et al. (2004 ▶). For related structures, see: Betz et al. (2012 ▶). For graph-set analysis of hydrogen bonds, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C15H9Cl2FO M = 295.12 Monoclinic, a = 11.3390 (3) Å b = 10.3896 (3) Å c = 11.3930 (3) Å β = 97.078 (1)° V = 1331.95 (6) Å3 Z = 4 Mo Kα radiation μ = 0.49 mm−1 T = 200 K 0.49 × 0.34 × 0.17 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.798, T max = 0.920 23002 measured reflections 3329 independent reflections 2742 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.111 S = 1.04 3329 reflections 182 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.60 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812010574/hg5184sup1.cif Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup2.cdx Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812010574/hg5184Isup3.hkl Supplementary material file. DOI: 10.1107/S1600536812010574/hg5184Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H9Cl2FOF(000) = 600
Mr = 295.12Dx = 1.472 Mg m3
Monoclinic, P21/cMelting point = 385–388 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.3390 (3) ÅCell parameters from 9971 reflections
b = 10.3896 (3) Åθ = 2.7–28.3°
c = 11.3930 (3) ŵ = 0.49 mm1
β = 97.078 (1)°T = 200 K
V = 1331.95 (6) Å3Block, colourless
Z = 40.49 × 0.34 × 0.17 mm
Bruker APEXII CCD diffractometer3329 independent reflections
Radiation source: fine-focus sealed tube2742 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.025
φ and ω scansθmax = 28.4°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −15→15
Tmin = 0.798, Tmax = 0.920k = −13→13
23002 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.040P)2 + 0.7737P] where P = (Fo2 + 2Fc2)/3
3329 reflections(Δ/σ)max = 0.001
182 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.60 e Å3
xyzUiso*/UeqOcc. (<1)
Cl10.83699 (6)0.03537 (6)0.06241 (5)0.06914 (19)
Cl20.43775 (5)0.32132 (6)−0.01452 (5)0.07146 (19)
O10.67486 (13)0.20446 (13)−0.16536 (10)0.0526 (3)
C10.76748 (14)0.40662 (15)0.08071 (14)0.0373 (3)
H10.73250.35700.13740.045*
C20.75116 (16)0.36328 (16)−0.03056 (14)0.0410 (4)
H20.78320.4114−0.09010.049*
C30.68640 (16)0.24564 (16)−0.06433 (13)0.0399 (3)
C110.83272 (14)0.52106 (15)0.12542 (14)0.0373 (3)
C120.89663 (17)0.59959 (17)0.05617 (17)0.0486 (4)
H120.89860.5798−0.02500.058*
C130.95691 (18)0.70569 (19)0.1055 (2)0.0569 (5)
H131.00180.75740.05840.068*
C140.9526 (2)0.7373 (2)0.2222 (2)0.0622 (6)
H140.99370.81120.25520.075*
C150.8889 (2)0.6619 (2)0.29125 (19)0.0602 (5)
H150.88500.68430.37150.072*
C160.83055 (16)0.55359 (17)0.24359 (15)0.0448 (4)
H160.78840.50070.29220.054*
C210.63217 (16)0.17125 (15)0.03024 (13)0.0407 (4)
C220.69437 (18)0.07128 (16)0.09046 (15)0.0467 (4)
C240.5310 (2)0.0283 (2)0.20019 (19)0.0693 (7)
H240.4966−0.02100.25740.083*
C260.51877 (18)0.19772 (19)0.05775 (16)0.0492 (4)
C23A0.6426 (2)0.00145 (19)0.17485 (17)0.0618 (6)0.747 (4)
C25A0.4689 (2)0.1274 (3)0.14214 (19)0.0665 (7)0.747 (4)
H25A0.39130.14780.15990.080*0.747 (4)
F1A0.7017 (2)−0.09064 (16)0.23597 (15)0.0758 (7)0.747 (4)
C23B0.6426 (2)0.00145 (19)0.17485 (17)0.0618 (6)0.25
H23B0.6862−0.06650.21570.074*0.253 (4)
C25B0.4689 (2)0.1274 (3)0.14214 (19)0.0665 (7)0.25
F2B0.3774 (5)0.1417 (8)0.1629 (6)0.099 (3)0.253 (4)
U11U22U33U12U13U23
Cl10.0789 (4)0.0587 (3)0.0676 (3)0.0216 (3)−0.0001 (3)0.0108 (2)
Cl20.0627 (3)0.0829 (4)0.0700 (4)0.0201 (3)0.0129 (3)0.0075 (3)
O10.0774 (9)0.0498 (7)0.0311 (6)0.0050 (6)0.0081 (6)−0.0060 (5)
C10.0450 (8)0.0320 (7)0.0358 (7)0.0024 (6)0.0077 (6)0.0041 (6)
C20.0523 (9)0.0386 (8)0.0327 (7)0.0025 (7)0.0077 (6)0.0057 (6)
C30.0512 (9)0.0373 (8)0.0311 (7)0.0084 (7)0.0051 (6)0.0000 (6)
C110.0393 (8)0.0319 (7)0.0403 (8)0.0043 (6)0.0031 (6)0.0045 (6)
C120.0544 (10)0.0406 (9)0.0516 (10)0.0008 (8)0.0098 (8)0.0096 (7)
C130.0501 (10)0.0430 (9)0.0763 (14)−0.0047 (8)0.0025 (9)0.0187 (9)
C140.0637 (12)0.0423 (10)0.0743 (14)−0.0108 (9)−0.0161 (10)0.0041 (9)
C150.0760 (14)0.0490 (11)0.0522 (11)−0.0091 (10)−0.0054 (10)−0.0057 (9)
C160.0537 (10)0.0392 (8)0.0409 (8)−0.0021 (7)0.0027 (7)0.0004 (7)
C210.0568 (10)0.0352 (8)0.0291 (7)−0.0053 (7)0.0009 (6)−0.0041 (6)
C220.0665 (11)0.0360 (8)0.0354 (8)−0.0068 (8)−0.0030 (7)−0.0018 (6)
C240.0934 (17)0.0662 (14)0.0480 (11)−0.0410 (13)0.0068 (11)0.0041 (10)
C260.0567 (10)0.0520 (10)0.0385 (8)−0.0074 (8)0.0036 (7)−0.0054 (7)
C23A0.0988 (18)0.0423 (10)0.0404 (10)−0.0211 (10)−0.0078 (10)0.0058 (8)
C25A0.0706 (15)0.0780 (15)0.0518 (11)−0.0294 (12)0.0114 (10)−0.0063 (11)
F1A0.1208 (17)0.0477 (9)0.0571 (10)0.0024 (9)0.0037 (10)0.0182 (7)
C23B0.0988 (18)0.0423 (10)0.0404 (10)−0.0211 (10)−0.0078 (10)0.0058 (8)
C25B0.0706 (15)0.0780 (15)0.0518 (11)−0.0294 (12)0.0114 (10)−0.0063 (11)
F2B0.066 (4)0.136 (6)0.103 (5)−0.033 (4)0.045 (3)−0.012 (4)
Cl1—C221.727 (2)C14—C151.376 (3)
Cl2—C261.728 (2)C14—H140.9500
O1—C31.2198 (19)C15—C161.382 (3)
C1—C21.337 (2)C15—H150.9500
C1—C111.459 (2)C16—H160.9500
C1—H10.9500C21—C261.388 (3)
C2—C31.453 (2)C21—C221.388 (2)
C2—H20.9500C22—C23A1.391 (3)
C3—C211.516 (2)C24—C23A1.362 (4)
C11—C161.391 (2)C24—C25A1.370 (4)
C11—C121.398 (2)C24—H240.9500
C12—C131.380 (3)C26—C25A1.383 (3)
C12—H120.9500C23A—F1A1.317 (3)
C13—C141.377 (3)C25A—H25A0.9500
C13—H130.9500
C2—C1—C11127.65 (15)C16—C15—H15120.0
C2—C1—H1116.2C15—C16—C11120.87 (18)
C11—C1—H1116.2C15—C16—H16119.6
C1—C2—C3122.74 (15)C11—C16—H16119.6
C1—C2—H2118.6C26—C21—C22117.70 (16)
C3—C2—H2118.6C26—C21—C3121.83 (15)
O1—C3—C2122.47 (16)C22—C21—C3120.45 (16)
O1—C3—C21119.07 (15)C21—C22—C23A120.0 (2)
C2—C3—C21118.46 (13)C21—C22—Cl1120.01 (14)
C16—C11—C12118.46 (16)C23A—C22—Cl1119.97 (16)
C16—C11—C1117.86 (15)C23A—C24—C25A119.2 (2)
C12—C11—C1123.68 (15)C23A—C24—H24120.4
C13—C12—C11120.13 (18)C25A—C24—H24120.4
C13—C12—H12119.9C25A—C26—C21121.5 (2)
C11—C12—H12119.9C25A—C26—Cl2119.02 (18)
C14—C13—C12120.62 (19)C21—C26—Cl2119.52 (14)
C14—C13—H13119.7F1A—C23A—C24117.6 (2)
C12—C13—H13119.7F1A—C23A—C22120.9 (2)
C15—C14—C13119.97 (19)C24—C23A—C22121.5 (2)
C15—C14—H14120.0C24—C25A—C26120.2 (2)
C13—C14—H14120.0C24—C25A—H25A119.9
C14—C15—C16119.9 (2)C26—C25A—H25A119.9
C14—C15—H15120.0
C11—C1—C2—C3178.53 (15)C26—C21—C22—C23A0.1 (2)
C1—C2—C3—O1−177.72 (17)C3—C21—C22—C23A−178.32 (15)
C1—C2—C3—C211.8 (2)C26—C21—C22—Cl1−178.77 (13)
C2—C1—C11—C16175.07 (17)C3—C21—C22—Cl12.8 (2)
C2—C1—C11—C12−4.7 (3)C22—C21—C26—C25A0.0 (3)
C16—C11—C12—C130.8 (3)C3—C21—C26—C25A178.42 (17)
C1—C11—C12—C13−179.44 (16)C22—C21—C26—Cl2179.90 (12)
C11—C12—C13—C14−1.6 (3)C3—C21—C26—Cl2−1.7 (2)
C12—C13—C14—C150.8 (3)C25A—C24—C23A—F1A177.08 (19)
C13—C14—C15—C160.8 (3)C25A—C24—C23A—C22−0.8 (3)
C14—C15—C16—C11−1.6 (3)C21—C22—C23A—F1A−177.52 (17)
C12—C11—C16—C150.8 (3)Cl1—C22—C23A—F1A1.4 (3)
C1—C11—C16—C15−178.99 (17)C21—C22—C23A—C240.3 (3)
O1—C3—C21—C26−92.4 (2)Cl1—C22—C23A—C24179.16 (16)
C2—C3—C21—C2688.0 (2)C23A—C24—C25A—C260.9 (3)
O1—C3—C21—C2285.9 (2)C21—C26—C25A—C24−0.5 (3)
C2—C3—C21—C22−93.60 (19)Cl2—C26—C25A—C24179.59 (16)
D—H···AD—HH···AD···AD—H···A
C1—H1···O1i0.952.503.399 (2)158
C16—H16···O1i0.952.573.440 (2)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O1i0.952.503.399 (2)158
C16—H16⋯O1i0.952.573.440 (2)153

Symmetry code: (i) .

  7 in total

1.  Anticancer activities of novel chalcone and bis-chalcone derivatives.

Authors:  Aneta Modzelewska; Catherine Pettit; Geetha Achanta; Nancy E Davidson; Peng Huang; Saeed R Khan
Journal:  Bioorg Med Chem       Date:  2006-01-24       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

4.  Chalcones and flavonoids as anti-tuberculosis agents.

Authors:  Yuh-Meei Lin; Yasheen Zhou; Michael T Flavin; Li-Ming Zhou; Weiguo Nie; Fa-Ching Chen
Journal:  Bioorg Med Chem       Date:  2002-08       Impact factor: 3.641

5.  Antifungal chalcones and new caffeic acid esters from Zuccagnia punctata acting against soybean infecting fungi.

Authors:  Laura Svetaz; Alejandro Tapia; Silvia N López; Ricardo L E Furlán; Elisa Petenatti; Rosanna Pioli; Guillermo Schmeda-Hirschmann; Susana A Zacchino
Journal:  J Agric Food Chem       Date:  2004-06-02       Impact factor: 5.279

6.  (2E)-1-(2,6-Dichloro-3-fluoro-phen-yl)-3-(4-fluoro-phen-yl)prop-2-en-1-one.

Authors:  Richard Betz; Thomas Gerber; Eric Hosten; Aletti S Praveen; Hemmige S Yathirajan; Badiadka Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-25

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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