| Literature DB >> 22589920 |
Abdulrahman O Al-Youbi, Abdullah M Asiri, Hassan M Faidallah, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title mol-ecule, C(13)H(16)N(2)O(2)S, the nine non-H atoms comprising the indole residue are approximately coplanar (r.m.s. deviation = 0.031 Å). The partially saturated ring adopts a chair conformation. One amine H forms an inter-molecular N-H⋯O hydrogen bond to a sulfonamide O atom, while the other amine H form is connected to the indole N atom of an adjacent mol-ecule via an N-H⋯N hydrogen bond, resulting in a three-dimensional architecture.Entities:
Year: 2012 PMID: 22589920 PMCID: PMC3344011 DOI: 10.1107/S1600536812010239
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H16N2O2S | |
| Monoclinic, | Melting point = 513–514 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 2450 reflections | |
| θ = 2.4–27.5° | |
| µ = 0.25 mm−1 | |
| β = 103.516 (6)° | |
| Prism, light-brown | |
| 0.25 × 0.20 × 0.10 mm |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 2959 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 2364 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 2.4° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 5426 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2959 reflections | (Δ/σ)max = 0.001 |
| 171 parameters | Δρmax = 0.79 e Å−3 |
| 0 restraints | Δρmin = −0.48 e Å−3 |
| S1 | 0.72173 (5) | 0.36862 (5) | 0.76427 (4) | 0.01546 (15) | |
| O1 | 0.76980 (15) | 0.24573 (13) | 0.73458 (11) | 0.0199 (3) | |
| N2 | 0.8396 (2) | 0.47419 (18) | 0.74549 (15) | 0.0183 (4) | |
| N1 | 0.17508 (18) | 0.53036 (16) | 0.47626 (13) | 0.0174 (4) | |
| O2 | 0.70440 (16) | 0.38463 (14) | 0.86604 (11) | 0.0226 (4) | |
| C1 | 0.1424 (2) | 0.63100 (19) | 0.52284 (16) | 0.0170 (4) | |
| C2 | 0.0292 (2) | 0.7272 (2) | 0.47752 (16) | 0.0228 (5) | |
| H2A | −0.0452 | 0.7341 | 0.5184 | 0.027* | |
| H2B | −0.0209 | 0.7011 | 0.4080 | 0.027* | |
| C3 | 0.1071 (3) | 0.8567 (2) | 0.47558 (17) | 0.0230 (5) | |
| H3A | 0.1717 | 0.8516 | 0.4276 | 0.028* | |
| H3B | 0.0329 | 0.9244 | 0.4513 | 0.028* | |
| C4 | 0.1988 (2) | 0.8935 (2) | 0.58062 (16) | 0.0223 (5) | |
| H4A | 0.2484 | 0.9766 | 0.5762 | 0.027* | |
| H4B | 0.1332 | 0.9045 | 0.6275 | 0.027* | |
| C5 | 0.3141 (2) | 0.79111 (19) | 0.62255 (16) | 0.0186 (4) | |
| H5A | 0.3676 | 0.8158 | 0.6917 | 0.022* | |
| H5B | 0.3859 | 0.7867 | 0.5796 | 0.022* | |
| C6 | 0.2435 (2) | 0.65700 (19) | 0.62602 (15) | 0.0164 (4) | |
| C7 | 0.1608 (2) | 0.6485 (2) | 0.71120 (17) | 0.0235 (5) | |
| H7A | 0.1174 | 0.5628 | 0.7112 | 0.035* | |
| H7B | 0.0828 | 0.7134 | 0.7001 | 0.035* | |
| H7C | 0.2293 | 0.6640 | 0.7765 | 0.035* | |
| C8 | 0.3498 (2) | 0.54740 (18) | 0.62982 (15) | 0.0143 (4) | |
| C9 | 0.4757 (2) | 0.51408 (18) | 0.70010 (15) | 0.0147 (4) | |
| H9 | 0.5094 | 0.5633 | 0.7599 | 0.018* | |
| C10 | 0.5525 (2) | 0.40494 (18) | 0.68035 (15) | 0.0143 (4) | |
| C11 | 0.5027 (2) | 0.32996 (19) | 0.59393 (15) | 0.0176 (4) | |
| H11 | 0.5554 | 0.2552 | 0.5834 | 0.021* | |
| C12 | 0.3755 (2) | 0.36502 (18) | 0.52309 (16) | 0.0168 (4) | |
| H12 | 0.3402 | 0.3151 | 0.4639 | 0.020* | |
| C13 | 0.3022 (2) | 0.47451 (19) | 0.54154 (15) | 0.0157 (4) | |
| H1 | 0.847 (3) | 0.474 (2) | 0.683 (2) | 0.032 (7)* | |
| H2 | 0.816 (3) | 0.549 (3) | 0.764 (2) | 0.030 (7)* |
| S1 | 0.0175 (3) | 0.0139 (3) | 0.0143 (3) | 0.00338 (19) | 0.00238 (19) | 0.00179 (18) |
| O1 | 0.0226 (8) | 0.0133 (7) | 0.0235 (8) | 0.0049 (6) | 0.0049 (6) | 0.0014 (6) |
| N2 | 0.0192 (9) | 0.0167 (9) | 0.0180 (10) | −0.0003 (7) | 0.0025 (7) | −0.0014 (7) |
| N1 | 0.0159 (8) | 0.0189 (8) | 0.0160 (9) | 0.0011 (7) | 0.0009 (7) | −0.0010 (7) |
| O2 | 0.0280 (8) | 0.0262 (8) | 0.0137 (8) | 0.0064 (7) | 0.0048 (6) | 0.0038 (6) |
| C1 | 0.0135 (9) | 0.0201 (10) | 0.0175 (10) | −0.0014 (8) | 0.0037 (8) | −0.0002 (8) |
| C2 | 0.0194 (10) | 0.0282 (11) | 0.0179 (11) | 0.0073 (9) | −0.0014 (8) | −0.0030 (9) |
| C3 | 0.0285 (12) | 0.0216 (11) | 0.0185 (11) | 0.0103 (9) | 0.0043 (9) | 0.0015 (8) |
| C4 | 0.0269 (11) | 0.0200 (10) | 0.0196 (11) | 0.0057 (9) | 0.0050 (9) | −0.0009 (9) |
| C5 | 0.0226 (11) | 0.0159 (10) | 0.0172 (10) | 0.0030 (9) | 0.0046 (8) | −0.0006 (8) |
| C6 | 0.0176 (10) | 0.0180 (10) | 0.0136 (10) | 0.0039 (8) | 0.0038 (8) | 0.0016 (8) |
| C7 | 0.0232 (11) | 0.0281 (11) | 0.0208 (11) | 0.0069 (9) | 0.0084 (9) | 0.0025 (9) |
| C8 | 0.0160 (9) | 0.0138 (9) | 0.0145 (10) | −0.0001 (8) | 0.0061 (8) | 0.0006 (7) |
| C9 | 0.0178 (10) | 0.0148 (9) | 0.0120 (9) | −0.0006 (8) | 0.0043 (8) | −0.0007 (7) |
| C10 | 0.0142 (9) | 0.0146 (9) | 0.0144 (10) | 0.0012 (8) | 0.0040 (7) | 0.0035 (8) |
| C11 | 0.0208 (10) | 0.0143 (9) | 0.0191 (11) | 0.0007 (8) | 0.0078 (8) | −0.0011 (8) |
| C12 | 0.0198 (10) | 0.0153 (10) | 0.0155 (10) | −0.0036 (8) | 0.0043 (8) | −0.0032 (8) |
| C13 | 0.0150 (9) | 0.0179 (10) | 0.0145 (10) | −0.0024 (8) | 0.0038 (8) | 0.0005 (8) |
| S1—O2 | 1.4398 (15) | C4—H4B | 0.9900 |
| S1—O1 | 1.4442 (14) | C5—C6 | 1.549 (3) |
| S1—N2 | 1.6197 (19) | C5—H5A | 0.9900 |
| S1—C10 | 1.764 (2) | C5—H5B | 0.9900 |
| N2—H1 | 0.86 (3) | C6—C8 | 1.507 (3) |
| N2—H2 | 0.86 (3) | C6—C7 | 1.539 (3) |
| N1—C1 | 1.297 (3) | C7—H7A | 0.9800 |
| N1—C13 | 1.432 (3) | C7—H7B | 0.9800 |
| C1—C2 | 1.484 (3) | C7—H7C | 0.9800 |
| C1—C6 | 1.522 (3) | C8—C9 | 1.377 (3) |
| C2—C3 | 1.536 (3) | C8—C13 | 1.401 (3) |
| C2—H2A | 0.9900 | C9—C10 | 1.403 (3) |
| C2—H2B | 0.9900 | C9—H9 | 0.9500 |
| C3—C4 | 1.533 (3) | C10—C11 | 1.396 (3) |
| C3—H3A | 0.9900 | C11—C12 | 1.395 (3) |
| C3—H3B | 0.9900 | C11—H11 | 0.9500 |
| C4—C5 | 1.529 (3) | C12—C13 | 1.383 (3) |
| C4—H4A | 0.9900 | C12—H12 | 0.9500 |
| O2—S1—O1 | 118.92 (9) | C4—C5—H5B | 109.3 |
| O2—S1—N2 | 107.89 (10) | C6—C5—H5B | 109.3 |
| O1—S1—N2 | 106.72 (10) | H5A—C5—H5B | 107.9 |
| O2—S1—C10 | 108.08 (9) | C8—C6—C1 | 99.28 (16) |
| O1—S1—C10 | 107.50 (9) | C8—C6—C7 | 112.08 (16) |
| N2—S1—C10 | 107.21 (9) | C1—C6—C7 | 111.62 (17) |
| S1—N2—H1 | 111.6 (17) | C8—C6—C5 | 113.55 (16) |
| S1—N2—H2 | 109.5 (17) | C1—C6—C5 | 108.06 (16) |
| H1—N2—H2 | 112 (2) | C7—C6—C5 | 111.58 (17) |
| C1—N1—C13 | 106.40 (17) | C6—C7—H7A | 109.5 |
| N1—C1—C2 | 124.71 (19) | C6—C7—H7B | 109.5 |
| N1—C1—C6 | 115.23 (18) | H7A—C7—H7B | 109.5 |
| C2—C1—C6 | 119.57 (18) | C6—C7—H7C | 109.5 |
| C1—C2—C3 | 107.61 (17) | H7A—C7—H7C | 109.5 |
| C1—C2—H2A | 110.2 | H7B—C7—H7C | 109.5 |
| C3—C2—H2A | 110.2 | C9—C8—C13 | 120.48 (18) |
| C1—C2—H2B | 110.2 | C9—C8—C6 | 131.77 (18) |
| C3—C2—H2B | 110.2 | C13—C8—C6 | 107.74 (17) |
| H2A—C2—H2B | 108.5 | C8—C9—C10 | 117.72 (18) |
| C4—C3—C2 | 111.61 (18) | C8—C9—H9 | 121.1 |
| C4—C3—H3A | 109.3 | C10—C9—H9 | 121.1 |
| C2—C3—H3A | 109.3 | C11—C10—C9 | 121.85 (18) |
| C4—C3—H3B | 109.3 | C11—C10—S1 | 119.82 (15) |
| C2—C3—H3B | 109.3 | C9—C10—S1 | 118.23 (15) |
| H3A—C3—H3B | 108.0 | C12—C11—C10 | 119.89 (18) |
| C5—C4—C3 | 111.52 (17) | C12—C11—H11 | 120.1 |
| C5—C4—H4A | 109.3 | C10—C11—H11 | 120.1 |
| C3—C4—H4A | 109.3 | C13—C12—C11 | 118.07 (19) |
| C5—C4—H4B | 109.3 | C13—C12—H12 | 121.0 |
| C3—C4—H4B | 109.3 | C11—C12—H12 | 121.0 |
| H4A—C4—H4B | 108.0 | C12—C13—C8 | 121.94 (18) |
| C4—C5—C6 | 111.71 (17) | C12—C13—N1 | 126.75 (18) |
| C4—C5—H5A | 109.3 | C8—C13—N1 | 111.29 (17) |
| C6—C5—H5A | 109.3 | ||
| C13—N1—C1—C2 | 172.04 (19) | C13—C8—C9—C10 | −0.6 (3) |
| C13—N1—C1—C6 | 0.1 (2) | C6—C8—C9—C10 | −179.19 (19) |
| N1—C1—C2—C3 | −117.4 (2) | C8—C9—C10—C11 | −1.4 (3) |
| C6—C1—C2—C3 | 54.2 (2) | C8—C9—C10—S1 | 174.85 (15) |
| C1—C2—C3—C4 | −54.0 (2) | O2—S1—C10—C11 | −139.60 (16) |
| C2—C3—C4—C5 | 58.2 (2) | O1—S1—C10—C11 | −10.09 (19) |
| C3—C4—C5—C6 | −56.1 (2) | N2—S1—C10—C11 | 104.33 (17) |
| N1—C1—C6—C8 | 1.3 (2) | O2—S1—C10—C9 | 44.03 (18) |
| C2—C1—C6—C8 | −171.03 (18) | O1—S1—C10—C9 | 173.54 (15) |
| N1—C1—C6—C7 | −117.0 (2) | N2—S1—C10—C9 | −72.03 (17) |
| C2—C1—C6—C7 | 70.6 (2) | C9—C10—C11—C12 | 1.8 (3) |
| N1—C1—C6—C5 | 119.95 (19) | S1—C10—C11—C12 | −174.46 (15) |
| C2—C1—C6—C5 | −52.4 (2) | C10—C11—C12—C13 | 0.0 (3) |
| C4—C5—C6—C8 | 159.10 (17) | C11—C12—C13—C8 | −2.0 (3) |
| C4—C5—C6—C1 | 50.0 (2) | C11—C12—C13—N1 | 176.45 (19) |
| C4—C5—C6—C7 | −73.1 (2) | C9—C8—C13—C12 | 2.3 (3) |
| C1—C6—C8—C9 | 176.5 (2) | C6—C8—C13—C12 | −178.76 (18) |
| C7—C6—C8—C9 | −65.5 (3) | C9—C8—C13—N1 | −176.32 (18) |
| C5—C6—C8—C9 | 62.1 (3) | C6—C8—C13—N1 | 2.6 (2) |
| C1—C6—C8—C13 | −2.2 (2) | C1—N1—C13—C12 | 179.7 (2) |
| C7—C6—C8—C13 | 115.73 (19) | C1—N1—C13—C8 | −1.7 (2) |
| C5—C6—C8—C13 | −116.70 (19) |
| H··· | ||||
| N2—H1···N1i | 0.86 (3) | 2.13 (3) | 2.986 (3) | 170 (2) |
| N2—H2···O1ii | 0.86 (3) | 2.20 (3) | 3.039 (2) | 164 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1⋯N1i | 0.86 (3) | 2.13 (3) | 2.986 (3) | 170 (2) |
| N2—H2⋯O1ii | 0.86 (3) | 2.20 (3) | 3.039 (2) | 164 (2) |
Symmetry codes: (i) ; (ii) .