Literature DB >> 22589897

2-[(E)-(Naphthalen-2-yl-imino)-meth-yl]-4-(trifluoro-meth-oxy)phenol.

Merve Pekdemir, Zarife Sibel Sahin, Samil Işık, Ayşen Alaman Ağar, Sema Oztürk Yıldırım, Ray J Butcher.   

Abstract

In the title compound, C(18)H(12)F(3)NO(2), the planes of the benzene ring and the naphthalene system form a dihedral angle of 47.21 (3)°. The hy-droxy group is involved in an intra-molecular O-H⋯N hydrogen bond. In the crystal, weak C-H⋯O and C-H⋯F inter-actions link the mol-ecules related by translations along the c and a axes, respectively, into sheets.

Entities:  

Year:  2012        PMID: 22589897      PMCID: PMC3343988          DOI: 10.1107/S1600536812009361

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to photochromic and thermochromic characteristics and tautomerism of Schiff bases, see: Cohen et al. (1964 ▶); Hadjoudis et al. (1987 ▶). For related structures, see: Gül et al. (2007 ▶); Yüce et al. (2004 ▶). For classification of hydrogen-bonding patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C18H12F3NO2 M = 331.29 Monoclinic, a = 17.0813 (10) Å b = 14.1248 (8) Å c = 6.1900 (5) Å β = 99.669 (6)° V = 1472.25 (17) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 123 K 0.50 × 0.40 × 0.18 mm

Data collection

Oxford Diffraction Gemini-R diffractometer Absorption correction: analytical [CrysAlis RED (Oxford Diffraction, 2007 ▶) based on Clark & Reid (1995 ▶) T min = 0.941, T max = 0.978 15270 measured reflections 2892 independent reflections 2497 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.130 S = 1.09 2892 reflections 221 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis PRO (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis PRO (Oxford Diffraction, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812009361/cv5250sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009361/cv5250Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812009361/cv5250Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H12F3NO2F(000) = 680
Mr = 331.29Dx = 1.495 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5076 reflections
a = 17.0813 (10) Åθ = 3.1–34.9°
b = 14.1248 (8) ŵ = 0.12 mm1
c = 6.1900 (5) ÅT = 123 K
β = 99.669 (6)°Plate, yellow
V = 1472.25 (17) Å30.50 × 0.40 × 0.18 mm
Z = 4
Oxford Diffraction Gemini-R diffractometer2892 independent reflections
Radiation source: Enhance (Mo) X-ray Source2497 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.050
Detector resolution: 10.5081 pixels mm-1θmax = 26.0°, θmin = 3.1°
ω scansh = −20→21
Absorption correction: analytical [CrysAlis RED (Oxford Diffraction, 2007) based on Clark & Reid (1995)k = −17→17
Tmin = 0.941, Tmax = 0.978l = −7→6
15270 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.062P)2 + 0.5277P] where P = (Fo2 + 2Fc2)/3
2892 reflections(Δ/σ)max < 0.001
221 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.52707 (9)0.88417 (11)0.3403 (3)0.0225 (4)
C20.59465 (10)0.90836 (11)0.2604 (3)0.0225 (3)
H20.59030.93380.12030.027*
C30.67071 (9)0.89512 (10)0.3876 (3)0.0222 (3)
C40.74184 (10)0.91509 (11)0.3061 (3)0.0268 (4)
H40.73900.94130.16720.032*
C50.81420 (10)0.89635 (12)0.4287 (3)0.0313 (4)
H50.86010.91030.37290.038*
C60.82014 (11)0.85608 (12)0.6391 (3)0.0320 (4)
H60.86980.84240.72010.038*
C70.75296 (10)0.83705 (11)0.7244 (3)0.0275 (4)
H70.75730.81140.86420.033*
C80.67680 (10)0.85604 (11)0.6021 (3)0.0232 (4)
C90.60574 (10)0.83457 (11)0.6822 (3)0.0246 (4)
H90.60890.81100.82370.029*
C100.53290 (10)0.84767 (11)0.5564 (3)0.0244 (4)
H100.48710.83270.61210.029*
C110.38798 (10)0.90319 (11)0.2662 (3)0.0241 (4)
H110.38940.92150.41120.029*
C120.31186 (10)0.89349 (11)0.1221 (3)0.0236 (4)
C130.24206 (10)0.92206 (11)0.1940 (3)0.0246 (4)
H130.24430.94750.33340.030*
C140.17025 (10)0.91238 (11)0.0580 (3)0.0265 (4)
C150.16428 (10)0.87238 (12)−0.1487 (3)0.0285 (4)
H150.11500.8661−0.23810.034*
C160.23260 (10)0.84183 (12)−0.2206 (3)0.0279 (4)
H160.22900.8130−0.35700.034*
C170.30663 (10)0.85398 (11)−0.0901 (3)0.0248 (4)
C180.05121 (10)0.89134 (14)0.1960 (3)0.0335 (4)
F10.08590 (7)0.83013 (9)0.3436 (2)0.0551 (4)
F2−0.00045 (7)0.94076 (10)0.2849 (2)0.0537 (4)
F30.01029 (7)0.84060 (11)0.0357 (2)0.0614 (4)
N10.45326 (8)0.88684 (9)0.1961 (2)0.0241 (3)
O10.37203 (7)0.82747 (9)−0.1701 (2)0.0301 (3)
O20.10202 (7)0.95092 (8)0.1277 (2)0.0328 (3)
H10.4140 (16)0.8422 (18)−0.067 (5)0.066 (8)*
U11U22U33U12U13U23
C10.0276 (8)0.0185 (8)0.0218 (8)0.0017 (6)0.0051 (7)−0.0016 (6)
C20.0325 (9)0.0176 (7)0.0184 (8)0.0003 (6)0.0072 (7)0.0002 (6)
C30.0282 (8)0.0162 (7)0.0228 (8)0.0003 (6)0.0060 (7)−0.0030 (6)
C40.0327 (9)0.0225 (8)0.0268 (9)−0.0017 (7)0.0095 (7)−0.0011 (7)
C50.0279 (9)0.0273 (9)0.0402 (10)−0.0031 (7)0.0102 (8)−0.0038 (8)
C60.0299 (9)0.0266 (9)0.0370 (10)0.0026 (7)−0.0018 (8)−0.0041 (8)
C70.0349 (9)0.0205 (8)0.0256 (9)0.0014 (6)0.0013 (7)−0.0025 (6)
C80.0317 (9)0.0158 (7)0.0220 (8)0.0005 (6)0.0043 (7)−0.0026 (6)
C90.0345 (9)0.0215 (8)0.0185 (8)0.0009 (6)0.0070 (7)0.0011 (6)
C100.0282 (8)0.0223 (8)0.0253 (9)−0.0004 (6)0.0118 (7)−0.0016 (6)
C110.0304 (9)0.0207 (8)0.0222 (8)0.0005 (6)0.0069 (7)−0.0012 (6)
C120.0292 (8)0.0191 (8)0.0231 (8)−0.0001 (6)0.0063 (7)0.0026 (6)
C130.0323 (9)0.0191 (8)0.0235 (8)0.0006 (6)0.0076 (7)−0.0003 (6)
C140.0277 (8)0.0224 (8)0.0303 (9)0.0020 (6)0.0080 (7)0.0031 (7)
C150.0291 (9)0.0270 (8)0.0282 (9)−0.0026 (7)0.0014 (7)0.0036 (7)
C160.0350 (9)0.0264 (8)0.0221 (8)−0.0016 (7)0.0041 (7)0.0003 (7)
C170.0303 (9)0.0213 (8)0.0245 (9)−0.0010 (6)0.0092 (7)0.0010 (6)
C180.0257 (9)0.0413 (11)0.0330 (10)0.0012 (7)0.0035 (8)−0.0022 (8)
F10.0503 (7)0.0630 (8)0.0554 (8)0.0110 (6)0.0188 (6)0.0264 (6)
F20.0386 (7)0.0587 (8)0.0701 (9)0.0065 (5)0.0274 (6)−0.0067 (6)
F30.0440 (7)0.0829 (10)0.0581 (8)−0.0267 (7)0.0108 (6)−0.0259 (7)
N10.0275 (7)0.0215 (7)0.0236 (7)−0.0009 (5)0.0052 (6)0.0006 (5)
O10.0299 (7)0.0375 (7)0.0244 (6)0.0001 (5)0.0085 (5)−0.0058 (5)
O20.0283 (6)0.0289 (7)0.0428 (8)0.0036 (5)0.0103 (5)−0.0008 (5)
C1—C21.373 (2)C11—N11.284 (2)
C1—N11.417 (2)C11—C121.454 (2)
C1—C101.421 (2)C11—H110.9300
C2—C31.414 (2)C12—C131.400 (2)
C2—H20.9300C12—C171.416 (2)
C3—C41.420 (2)C13—C141.373 (2)
C3—C81.425 (2)C13—H130.9300
C4—C51.363 (2)C14—C151.387 (2)
C4—H40.9300C14—O21.4176 (19)
C5—C61.409 (3)C15—C161.386 (2)
C5—H50.9300C15—H150.9300
C6—C71.368 (3)C16—C171.392 (2)
C6—H60.9300C16—H160.9300
C7—C81.416 (2)C17—O11.349 (2)
C7—H70.9300C18—F21.316 (2)
C8—C91.419 (2)C18—F11.324 (2)
C9—C101.365 (2)C18—F31.324 (2)
C9—H90.9300C18—O21.328 (2)
C10—H100.9300O1—H10.90 (3)
C2—C1—N1118.63 (14)N1—C11—C12120.90 (15)
C2—C1—C10119.94 (15)N1—C11—H11119.5
N1—C1—C10121.10 (14)C12—C11—H11119.5
C1—C2—C3121.05 (15)C13—C12—C17118.92 (15)
C1—C2—H2119.5C13—C12—C11119.96 (15)
C3—C2—H2119.5C17—C12—C11121.11 (15)
C2—C3—C4122.47 (15)C14—C13—C12119.83 (15)
C2—C3—C8119.10 (14)C14—C13—H13120.1
C4—C3—C8118.35 (15)C12—C13—H13120.1
C5—C4—C3120.90 (16)C13—C14—C15121.73 (15)
C5—C4—H4119.6C13—C14—O2118.08 (15)
C3—C4—H4119.6C15—C14—O2120.04 (15)
C4—C5—C6120.71 (16)C16—C15—C14119.18 (16)
C4—C5—H5119.6C16—C15—H15120.4
C6—C5—H5119.6C14—C15—H15120.4
C7—C6—C5120.07 (16)C15—C16—C17120.49 (16)
C7—C6—H6120.0C15—C16—H16119.8
C5—C6—H6120.0C17—C16—H16119.8
C6—C7—C8120.76 (16)O1—C17—C16118.72 (15)
C6—C7—H7119.6O1—C17—C12121.51 (15)
C8—C7—H7119.6C16—C17—C12119.77 (15)
C7—C8—C9122.39 (15)F2—C18—F1108.15 (15)
C7—C8—C3119.20 (15)F2—C18—F3107.09 (14)
C9—C8—C3118.38 (15)F1—C18—F3106.41 (17)
C10—C9—C8121.55 (15)F2—C18—O2108.49 (16)
C10—C9—H9119.2F1—C18—O2113.14 (14)
C8—C9—H9119.2F3—C18—O2113.28 (15)
C9—C10—C1119.93 (15)C11—N1—C1121.55 (14)
C9—C10—H10120.0C17—O1—H1106.7 (17)
C1—C10—H10120.0C18—O2—C14117.93 (13)
N1—C1—C2—C3−171.57 (13)C17—C12—C13—C14−0.7 (2)
C10—C1—C2—C31.8 (2)C11—C12—C13—C14−179.68 (14)
C1—C2—C3—C4176.90 (14)C12—C13—C14—C151.8 (2)
C1—C2—C3—C80.0 (2)C12—C13—C14—O2−173.65 (14)
C2—C3—C4—C5−176.17 (15)C13—C14—C15—C16−0.4 (2)
C8—C3—C4—C50.8 (2)O2—C14—C15—C16174.97 (14)
C3—C4—C5—C60.4 (3)C14—C15—C16—C17−2.1 (2)
C4—C5—C6—C7−1.3 (3)C15—C16—C17—O1−176.85 (14)
C5—C6—C7—C81.0 (3)C15—C16—C17—C123.2 (2)
C6—C7—C8—C9178.00 (15)C13—C12—C17—O1178.27 (14)
C6—C7—C8—C30.2 (2)C11—C12—C17—O1−2.7 (2)
C2—C3—C8—C7175.98 (14)C13—C12—C17—C16−1.8 (2)
C4—C3—C8—C7−1.1 (2)C11—C12—C17—C16177.22 (14)
C2—C3—C8—C9−1.9 (2)C12—C11—N1—C1−171.85 (13)
C4—C3—C8—C9−178.95 (14)C2—C1—N1—C11−151.42 (15)
C7—C8—C9—C10−175.68 (15)C10—C1—N1—C1135.3 (2)
C3—C8—C9—C102.1 (2)F2—C18—O2—C14170.19 (14)
C8—C9—C10—C1−0.4 (2)F1—C18—O2—C1450.2 (2)
C2—C1—C10—C9−1.6 (2)F3—C18—O2—C14−71.0 (2)
N1—C1—C10—C9171.60 (14)C13—C14—O2—C18−105.77 (18)
N1—C11—C12—C13−172.63 (14)C15—C14—O2—C1878.7 (2)
N1—C11—C12—C178.4 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.90 (3)1.77 (3)2.5904 (18)150 (2)
C10—H10···O1i0.932.573.473 (2)165
C5—H5···F2ii0.932.573.487 (2)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.90 (3)1.77 (3)2.5904 (18)150 (2)
C10—H10⋯O1i0.932.573.473 (2)165
C5—H5⋯F2ii0.932.573.487 (2)170

Symmetry codes: (i) ; (ii) .

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Authors:  George M Sheldrick
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1.  5-Diethyl-amino-2-{(E)-[(3-iodo-phen-yl)imino]-meth-yl}phenol.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-31
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