Literature DB >> 22589874

Dibromidobis(pyrazine-2-carboxamide-κN(4))zinc.

Sadif A Shirvan1, Sara Haydari Dezfuli.   

Abstract

The title complex, [ZnBr(2)(C(5)H(5)N(3)O)(2)], shows crystallographic mirror symmetry with the Zn atom and the two bromine ligands located on the mirror plane. The Zn atom is four-coordinated in a distorted tetra-hedral fashion by two N atoms from two pyrazine-2-carboxamide ligands and two Br atoms. Only one of the amino H atoms is involved in an N-H⋯O hydrogen bond. The crystal packing is further stabilized by weak N-H⋯N and C-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 22589874      PMCID: PMC3343906          DOI: 10.1107/S1600536812013335

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Abu-Youssef et al. (2006 ▶); Azhdari Tehrani et al. (2010 ▶); Goher & Mautner (2000 ▶); Kristiansson (2002 ▶); Mir Mohammad Sadegh et al. (2010 ▶); Munakata et al. (1997 ▶); Pacigova et al. (2008 ▶).

Experimental

Crystal data

[ZnBr2(C5H5N3O)2] M = 471.43 Monoclinic, a = 5.6042 (4) Å b = 19.5147 (19) Å c = 7.0656 (5) Å β = 106.835 (5)° V = 739.61 (10) Å3 Z = 2 Mo Kα radiation μ = 7.08 mm−1 T = 298 K 0.25 × 0.24 × 0.20 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.205, T max = 0.250 3935 measured reflections 1495 independent reflections 1247 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.111 S = 1.10 1495 reflections 100 parameters H-atom parameters constrained Δρmax = 0.77 e Å−3 Δρmin = −1.19 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812013335/bt5863sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812013335/bt5863Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnBr2(C5H5N3O)2]F(000) = 456
Mr = 471.43Dx = 2.117 Mg m3
Monoclinic, P21/mMo Kα radiation, λ = 0.71073 Å
a = 5.6042 (4) ÅCell parameters from 3935 reflections
b = 19.5147 (19) Åθ = 3.0–26.0°
c = 7.0656 (5) ŵ = 7.08 mm1
β = 106.835 (5)°T = 298 K
V = 739.61 (10) Å3Block, colorless
Z = 20.25 × 0.24 × 0.20 mm
Bruker APEXII CCD area-detector diffractometer1495 independent reflections
Radiation source: fine-focus sealed tube1247 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.053
ω scansθmax = 26.0°, θmin = 3.0°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −6→6
Tmin = 0.205, Tmax = 0.250k = −21→24
3935 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0663P)2] where P = (Fo2 + 2Fc2)/3
1495 reflections(Δ/σ)max = 0.003
100 parametersΔρmax = 0.77 e Å3
0 restraintsΔρmin = −1.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5931 (9)0.6363 (3)1.0284 (7)0.0268 (10)
H10.73060.64661.13500.032*
C20.3658 (9)0.6512 (3)0.7068 (8)0.0322 (11)
H20.34290.67170.58390.039*
C30.1931 (10)0.6034 (3)0.7302 (8)0.0360 (12)
H30.05500.59360.62370.043*
C40.4230 (9)0.5883 (3)1.0503 (7)0.0264 (10)
C50.4616 (10)0.5526 (3)1.2446 (8)0.0320 (11)
N10.5632 (7)0.6684 (2)0.8557 (6)0.0256 (9)
N20.2205 (7)0.5714 (2)0.9018 (7)0.0334 (10)
N30.2721 (10)0.5171 (3)1.2679 (8)0.0532 (15)
H3B0.28500.49631.37780.064*
H3C0.13550.51471.17320.064*
O10.6621 (7)0.5585 (2)1.3724 (6)0.0469 (11)
Zn10.79117 (14)0.75000.82766 (12)0.0244 (2)
Br10.79321 (15)0.75000.49867 (12)0.0392 (2)
Br21.13911 (12)0.75001.10460 (11)0.0351 (2)
U11U22U33U12U13U23
C10.025 (2)0.029 (3)0.023 (2)−0.0022 (18)0.0017 (19)0.001 (2)
C20.035 (3)0.035 (3)0.023 (3)−0.001 (2)0.002 (2)0.002 (2)
C30.033 (3)0.043 (3)0.026 (3)−0.011 (2)−0.001 (2)0.003 (2)
C40.025 (2)0.026 (2)0.027 (3)−0.0027 (19)0.0062 (19)0.001 (2)
C50.036 (3)0.032 (3)0.026 (3)−0.009 (2)0.006 (2)0.001 (2)
N10.0247 (18)0.028 (2)0.024 (2)−0.0028 (17)0.0075 (16)−0.0010 (17)
N20.027 (2)0.037 (3)0.033 (2)−0.0069 (18)0.0033 (18)0.001 (2)
N30.044 (3)0.074 (4)0.034 (3)−0.028 (3)0.000 (2)0.017 (3)
O10.043 (2)0.055 (3)0.032 (2)−0.0183 (19)−0.0068 (17)0.0147 (19)
Zn10.0224 (4)0.0275 (4)0.0247 (4)0.0000.0088 (3)0.000
Br10.0424 (4)0.0536 (5)0.0242 (4)0.0000.0138 (3)0.000
Br20.0222 (4)0.0511 (5)0.0302 (4)0.0000.0049 (3)0.000
C1—N11.338 (6)C4—C51.499 (7)
C1—C41.377 (7)C5—O11.226 (6)
C1—H10.9300C5—N31.317 (7)
C2—N11.331 (7)N1—Zn12.086 (4)
C2—C31.388 (8)N3—H3B0.8600
C2—H20.9300N3—H3C0.8600
C3—N21.333 (7)Zn1—N1i2.086 (4)
C3—H30.9300Zn1—Br12.3278 (11)
C4—N21.345 (6)Zn1—Br22.3283 (11)
N1—C1—C4120.8 (5)N3—C5—C4116.8 (5)
N1—C1—H1119.6C2—N1—C1117.3 (4)
C4—C1—H1119.6C2—N1—Zn1120.6 (4)
N1—C2—C3121.6 (5)C1—N1—Zn1121.7 (3)
N1—C2—H2119.2C3—N2—C4116.3 (4)
C3—C2—H2119.2C5—N3—H3B120.0
N2—C3—C2121.6 (5)C5—N3—H3C120.0
N2—C3—H3119.2H3B—N3—H3C120.0
C2—C3—H3119.2N1—Zn1—N1i99.5 (2)
N2—C4—C1122.4 (5)N1—Zn1—Br1105.96 (12)
N2—C4—C5117.7 (4)N1i—Zn1—Br1105.96 (12)
C1—C4—C5119.9 (4)N1—Zn1—Br2107.88 (12)
O1—C5—N3123.9 (5)N1i—Zn1—Br2107.88 (12)
O1—C5—C4119.3 (5)Br1—Zn1—Br2126.45 (4)
N1—C2—C3—N2−1.7 (9)C4—C1—N1—Zn1172.0 (4)
N1—C1—C4—N2−0.1 (8)C2—C3—N2—C40.5 (8)
N1—C1—C4—C5179.4 (5)C1—C4—N2—C30.4 (8)
N2—C4—C5—O1168.4 (5)C5—C4—N2—C3−179.2 (5)
C1—C4—C5—O1−11.2 (8)C2—N1—Zn1—N1i75.8 (4)
N2—C4—C5—N3−12.6 (8)C1—N1—Zn1—N1i−97.0 (4)
C1—C4—C5—N3167.8 (5)C2—N1—Zn1—Br1−33.9 (4)
C3—C2—N1—C11.9 (8)C1—N1—Zn1—Br1153.3 (4)
C3—C2—N1—Zn1−171.2 (4)C2—N1—Zn1—Br2−171.8 (4)
C4—C1—N1—C2−1.0 (7)C1—N1—Zn1—Br215.4 (4)
D—H···AD—HH···AD···AD—H···A
N3—H3B···O1ii0.862.012.869 (7)175
N3—H3C···N20.862.382.732 (7)105
N3—H3C···N2iii0.862.543.182 (7)132
C3—H3···O1iv0.932.493.414 (7)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3B⋯O1i0.862.012.869 (7)175
N3—H3C⋯N20.862.382.732 (7)105
N3—H3C⋯N2ii0.862.543.182 (7)132
C3—H3⋯O1iii0.932.493.414 (7)172

Symmetry codes: (i) ; (ii) ; (iii) .

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