| Literature DB >> 22589873 |
Tapashi G Roy, Debashis Palit, Babul Chandra Nath, Seik Weng Ng, Edward R T Tiekink.
Abstract
The complete cation in the title hydrated mol-ecular salt, [Ni(CH(3)CO(2))(C(16)H(36)N(4))]ClO(4)·H(2)O, is generated by the application of crystallographic twofold symmetry; the perchlorate anion and water mol-ecule are each disordered around a twofold axis. The Ni(II) atom exists within a cis-N(4)O(2) donor set based on a strongly distorted octa-hedron and defined by the four N atoms of the macrocyclic ligand and two O atoms of a symmetrically coordinating acetate ligand. In the crystal, hydrogen bonding (water-acetate/perchlorate O-H⋯O and amine-perchlorate N-H⋯O) leads to layers in the ab plane. The layers stack along the c axis, being connected by C-H⋯O(water) inter-actions. The crystal studied was found to be a non-merohedral twin; the minor component refined to 15.9 (6)%.Entities:
Year: 2012 PMID: 22589873 PMCID: PMC3343905 DOI: 10.1107/S1600536812013232
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C2H3O2)(C16H36N4]ClO4·H2O | |
| Monoclinic, | Cu |
| Hall symbol: -C 2yc | Cell parameters from 3218 reflections |
| θ = 5.5–76.4° | |
| µ = 2.58 mm−1 | |
| β = 96.534 (3)° | Prism, light-purple |
| 0.25 × 0.20 × 0.15 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 2480 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 2286 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 76.6°, θmin = 5.5° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 5502 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2480 reflections | (Δ/σ)max < 0.001 |
| 171 parameters | Δρmax = 0.60 e Å−3 |
| 45 restraints | Δρmin = −0.62 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Ni | 0.5000 | 0.56446 (4) | 0.7500 | 0.0300 (3) | |
| Cl1 | 0.4637 (3) | 0.86782 (11) | 0.71627 (15) | 0.0559 (6) | 0.50 |
| O2 | 0.6083 (10) | 0.8409 (9) | 0.7174 (9) | 0.197 (12) | 0.50 |
| O3 | 0.4105 (13) | 0.8372 (5) | 0.7910 (6) | 0.111 (5) | 0.50 |
| O4 | 0.4585 (9) | 0.9554 (3) | 0.7181 (5) | 0.085 (3) | 0.50 |
| O5 | 0.3800 (9) | 0.8336 (6) | 0.6466 (5) | 0.111 (3) | 0.50 |
| O1W | 0.7196 (13) | 0.8995 (10) | 0.8864 (7) | 0.147 (6) | 0.50 |
| H1W1 | 0.7967 | 0.9187 | 0.8726 | 0.220* | 0.50 |
| H1W2 | 0.6729 | 0.8794 | 0.8433 | 0.220* | 0.50 |
| O1 | 0.4508 (2) | 0.45087 (14) | 0.80858 (16) | 0.0318 (5) | |
| N1 | 0.5584 (4) | 0.64503 (18) | 0.6573 (2) | 0.0459 (9) | |
| H1 | 0.5406 | 0.6967 | 0.6721 | 0.069* | |
| N2 | 0.2798 (3) | 0.5692 (2) | 0.6999 (2) | 0.0412 (8) | |
| H2 | 0.2413 | 0.5227 | 0.7164 | 0.062* | |
| C1 | 0.5402 (7) | 0.6902 (4) | 0.5067 (4) | 0.085 (2) | |
| H1A | 0.6439 | 0.6833 | 0.5075 | 0.128* | |
| H1B | 0.5188 | 0.7483 | 0.5206 | 0.128* | |
| H1C | 0.4930 | 0.6766 | 0.4508 | 0.128* | |
| C2 | 0.4854 (5) | 0.6312 (3) | 0.5713 (3) | 0.0546 (12) | |
| H2A | 0.5042 | 0.5722 | 0.5546 | 0.066* | |
| C3 | 0.3231 (5) | 0.6426 (3) | 0.5688 (4) | 0.0681 (16) | |
| H3A | 0.2832 | 0.6489 | 0.5095 | 0.082* | |
| H3B | 0.3059 | 0.6961 | 0.5973 | 0.082* | |
| C4 | 0.2374 (5) | 0.5741 (3) | 0.6076 (3) | 0.0535 (12) | |
| C5 | 0.2620 (5) | 0.4882 (3) | 0.5708 (3) | 0.0554 (11) | |
| H5A | 0.3634 | 0.4733 | 0.5823 | 0.083* | |
| H5B | 0.2345 | 0.4895 | 0.5102 | 0.083* | |
| H5C | 0.2039 | 0.4465 | 0.5963 | 0.083* | |
| C6 | 0.0754 (5) | 0.5945 (4) | 0.5877 (4) | 0.0749 (17) | |
| H6A | 0.0558 | 0.6499 | 0.6102 | 0.112* | |
| H6B | 0.0190 | 0.5521 | 0.6134 | 0.112* | |
| H6C | 0.0493 | 0.5944 | 0.5269 | 0.112* | |
| C7 | 0.2205 (4) | 0.6372 (3) | 0.7477 (3) | 0.0534 (12) | |
| H7A | 0.1153 | 0.6310 | 0.7446 | 0.064* | |
| H7B | 0.2415 | 0.6920 | 0.7229 | 0.064* | |
| C8 | 0.2843 (4) | 0.6345 (3) | 0.8372 (3) | 0.0514 (11) | |
| H8A | 0.2428 | 0.6799 | 0.8689 | 0.062* | |
| H8B | 0.2614 | 0.5803 | 0.8624 | 0.062* | |
| C9 | 0.5000 | 0.4119 (3) | 0.7500 | 0.0312 (10) | |
| C10 | 0.5000 | 0.3177 (3) | 0.7500 | 0.0555 (16) | |
| H10A | 0.4629 | 0.2973 | 0.8008 | 0.083* | 0.50 |
| H10B | 0.5979 | 0.2973 | 0.7486 | 0.083* | 0.50 |
| H10C | 0.4392 | 0.2973 | 0.7006 | 0.083* | 0.50 |
| Ni | 0.0253 (4) | 0.0131 (4) | 0.0551 (6) | 0.000 | 0.0195 (4) | 0.000 |
| Cl1 | 0.0651 (14) | 0.0221 (8) | 0.0840 (16) | 0.0086 (8) | 0.0232 (11) | −0.0024 (8) |
| O2 | 0.201 (15) | 0.173 (14) | 0.218 (15) | 0.025 (9) | 0.034 (10) | −0.029 (9) |
| O3 | 0.150 (9) | 0.049 (5) | 0.131 (8) | −0.031 (5) | 0.013 (6) | 0.048 (5) |
| O4 | 0.104 (7) | 0.022 (3) | 0.141 (8) | 0.003 (3) | 0.063 (5) | −0.004 (3) |
| O5 | 0.117 (7) | 0.117 (7) | 0.093 (6) | 0.022 (6) | −0.005 (5) | −0.035 (5) |
| O1W | 0.122 (9) | 0.232 (15) | 0.087 (7) | −0.090 (10) | 0.017 (6) | −0.022 (8) |
| O1 | 0.0294 (12) | 0.0186 (11) | 0.0479 (14) | −0.0039 (9) | 0.0068 (10) | 0.0020 (9) |
| N1 | 0.0461 (19) | 0.0204 (14) | 0.079 (2) | 0.0067 (13) | 0.0404 (18) | 0.0113 (14) |
| N2 | 0.0320 (15) | 0.0318 (16) | 0.063 (2) | 0.0107 (13) | 0.0194 (14) | 0.0140 (14) |
| C1 | 0.090 (4) | 0.070 (4) | 0.106 (5) | 0.023 (3) | 0.058 (4) | 0.052 (3) |
| C2 | 0.059 (3) | 0.044 (2) | 0.067 (3) | 0.018 (2) | 0.034 (2) | 0.026 (2) |
| C3 | 0.061 (3) | 0.065 (3) | 0.083 (3) | 0.034 (2) | 0.029 (3) | 0.044 (3) |
| C4 | 0.038 (2) | 0.058 (3) | 0.066 (3) | 0.0198 (19) | 0.0136 (19) | 0.024 (2) |
| C5 | 0.041 (2) | 0.070 (3) | 0.054 (2) | 0.014 (2) | 0.0018 (19) | 0.010 (2) |
| C6 | 0.044 (3) | 0.094 (4) | 0.087 (4) | 0.032 (3) | 0.010 (3) | 0.031 (3) |
| C7 | 0.038 (2) | 0.038 (2) | 0.090 (3) | 0.0211 (17) | 0.033 (2) | 0.014 (2) |
| C8 | 0.042 (2) | 0.034 (2) | 0.086 (3) | 0.0081 (17) | 0.042 (2) | 0.002 (2) |
| C9 | 0.024 (2) | 0.019 (2) | 0.050 (3) | 0.000 | −0.001 (2) | 0.000 |
| C10 | 0.074 (4) | 0.017 (2) | 0.076 (4) | 0.000 | 0.010 (3) | 0.000 |
| Ni—O1 | 2.118 (2) | C2—H2A | 1.0000 |
| Ni—N1i | 2.089 (3) | C3—C4 | 1.532 (7) |
| Ni—N1 | 2.089 (3) | C3—H3A | 0.9900 |
| Ni—O1i | 2.118 (2) | C3—H3B | 0.9900 |
| Ni—N2 | 2.136 (3) | C4—C5 | 1.521 (7) |
| Ni—N2i | 2.136 (3) | C4—C6 | 1.556 (6) |
| Cl1—O4 | 1.400 (5) | C5—H5A | 0.9800 |
| Cl1—O5 | 1.404 (6) | C5—H5B | 0.9800 |
| Cl1—O2 | 1.424 (8) | C5—H5C | 0.9800 |
| Cl1—O3 | 1.439 (7) | C6—H6A | 0.9800 |
| O1W—H1W1 | 0.8400 | C6—H6B | 0.9800 |
| O1W—H1W2 | 0.8399 | C6—H6C | 0.9800 |
| O1—C9 | 1.259 (3) | C7—C8 | 1.495 (7) |
| N1—C8i | 1.481 (5) | C7—H7A | 0.9900 |
| N1—C2 | 1.488 (6) | C7—H7B | 0.9900 |
| N1—H1 | 0.8800 | C8—N1i | 1.481 (5) |
| N2—C7 | 1.475 (5) | C8—H8A | 0.9900 |
| N2—C4 | 1.493 (6) | C8—H8B | 0.9900 |
| N2—H2 | 0.8800 | C9—O1i | 1.259 (3) |
| C1—C2 | 1.534 (6) | C9—C10 | 1.503 (7) |
| C1—H1A | 0.9800 | C10—H10A | 0.9800 |
| C1—H1B | 0.9800 | C10—H10B | 0.9800 |
| C1—H1C | 0.9800 | C10—H10C | 0.9800 |
| C2—C3 | 1.532 (6) | ||
| N1i—Ni—N1 | 104.01 (18) | C3—C2—H2A | 108.2 |
| N1i—Ni—O1i | 158.84 (12) | C1—C2—H2A | 108.2 |
| N1—Ni—O1i | 96.96 (11) | C2—C3—C4 | 118.2 (3) |
| N1i—Ni—O1 | 96.96 (11) | C2—C3—H3A | 107.8 |
| N1—Ni—O1 | 158.84 (12) | C4—C3—H3A | 107.8 |
| O1i—Ni—O1 | 62.28 (13) | C2—C3—H3B | 107.8 |
| N1i—Ni—N2 | 85.68 (14) | C4—C3—H3B | 107.8 |
| N1—Ni—N2 | 91.80 (13) | H3A—C3—H3B | 107.1 |
| O1i—Ni—N2 | 96.56 (11) | N2—C4—C5 | 107.7 (3) |
| O1—Ni—N2 | 86.94 (11) | N2—C4—C3 | 110.4 (4) |
| N1i—Ni—N2i | 91.80 (13) | C5—C4—C3 | 112.0 (4) |
| N1—Ni—N2i | 85.68 (14) | N2—C4—C6 | 111.1 (4) |
| O1i—Ni—N2i | 86.94 (11) | C5—C4—C6 | 107.3 (5) |
| O1—Ni—N2i | 96.56 (11) | C3—C4—C6 | 108.4 (4) |
| N2—Ni—N2i | 175.92 (17) | C4—C5—H5A | 109.5 |
| O4—Cl1—O5 | 112.8 (5) | C4—C5—H5B | 109.5 |
| O4—Cl1—O2 | 109.7 (5) | H5A—C5—H5B | 109.5 |
| O5—Cl1—O2 | 109.9 (5) | C4—C5—H5C | 109.5 |
| O4—Cl1—O3 | 107.8 (4) | H5A—C5—H5C | 109.5 |
| O5—Cl1—O3 | 108.5 (5) | H5B—C5—H5C | 109.5 |
| O2—Cl1—O3 | 108.0 (5) | C4—C6—H6A | 109.5 |
| H1W1—O1W—H1W2 | 107.9 | C4—C6—H6B | 109.5 |
| C9—O1—Ni | 88.4 (2) | H6A—C6—H6B | 109.5 |
| C8i—N1—C2 | 113.0 (3) | C4—C6—H6C | 109.5 |
| C8i—N1—Ni | 103.3 (3) | H6A—C6—H6C | 109.5 |
| C2—N1—Ni | 116.1 (2) | H6B—C6—H6C | 109.5 |
| C8i—N1—H1 | 108.0 | N2—C7—C8 | 110.3 (3) |
| C2—N1—H1 | 108.0 | N2—C7—H7A | 109.6 |
| Ni—N1—H1 | 108.0 | C8—C7—H7A | 109.6 |
| C7—N2—C4 | 113.9 (3) | N2—C7—H7B | 109.6 |
| C7—N2—Ni | 103.7 (3) | C8—C7—H7B | 109.6 |
| C4—N2—Ni | 120.9 (2) | H7A—C7—H7B | 108.1 |
| C7—N2—H2 | 105.7 | N1i—C8—C7 | 110.0 (3) |
| C4—N2—H2 | 105.7 | N1i—C8—H8A | 109.7 |
| Ni—N2—H2 | 105.7 | C7—C8—H8A | 109.7 |
| C2—C1—H1A | 109.5 | N1i—C8—H8B | 109.7 |
| C2—C1—H1B | 109.5 | C7—C8—H8B | 109.7 |
| H1A—C1—H1B | 109.5 | H8A—C8—H8B | 108.2 |
| C2—C1—H1C | 109.5 | O1i—C9—O1 | 120.9 (4) |
| H1A—C1—H1C | 109.5 | O1i—C9—C10 | 119.6 (2) |
| H1B—C1—H1C | 109.5 | O1—C9—C10 | 119.6 (2) |
| N1—C2—C3 | 111.1 (4) | C9—C10—H10A | 109.5 |
| N1—C2—C1 | 112.4 (5) | C9—C10—H10B | 109.5 |
| C3—C2—C1 | 108.6 (4) | C9—C10—H10C | 109.5 |
| N1—C2—H2A | 108.2 | ||
| N1i—Ni—O1—C9 | −175.68 (14) | O1—Ni—N2—C4 | −123.0 (3) |
| N1—Ni—O1—C9 | 11.9 (4) | C8i—N1—C2—C3 | 180.0 (3) |
| O1i—Ni—O1—C9 | 0.0 | Ni—N1—C2—C3 | 60.9 (4) |
| N2—Ni—O1—C9 | 99.05 (14) | C8i—N1—C2—C1 | −58.0 (4) |
| N2i—Ni—O1—C9 | −83.05 (14) | Ni—N1—C2—C1 | −177.1 (3) |
| N1i—Ni—N1—C8i | 109.4 (3) | N1—C2—C3—C4 | −73.5 (6) |
| O1i—Ni—N1—C8i | −67.8 (3) | C1—C2—C3—C4 | 162.3 (5) |
| O1—Ni—N1—C8i | −78.4 (5) | C7—N2—C4—C5 | −161.4 (3) |
| N2—Ni—N1—C8i | −164.6 (3) | Ni—N2—C4—C5 | 74.0 (4) |
| N2i—Ni—N1—C8i | 18.6 (3) | C7—N2—C4—C3 | 76.1 (4) |
| N1i—Ni—N1—C2 | −126.3 (3) | Ni—N2—C4—C3 | −48.5 (4) |
| O1i—Ni—N1—C2 | 56.5 (3) | C7—N2—C4—C6 | −44.2 (5) |
| O1—Ni—N1—C2 | 45.9 (5) | Ni—N2—C4—C6 | −168.8 (3) |
| N2—Ni—N1—C2 | −40.3 (3) | C2—C3—C4—N2 | 65.0 (6) |
| N2i—Ni—N1—C2 | 142.9 (3) | C2—C3—C4—C5 | −55.0 (7) |
| N1i—Ni—N2—C7 | 10.5 (2) | C2—C3—C4—C6 | −173.1 (5) |
| N1—Ni—N2—C7 | −93.4 (2) | C4—N2—C7—C8 | −172.0 (3) |
| O1i—Ni—N2—C7 | 169.4 (2) | Ni—N2—C7—C8 | −38.6 (4) |
| O1—Ni—N2—C7 | 107.7 (2) | N2—C7—C8—N1i | 60.1 (4) |
| N1i—Ni—N2—C4 | 139.7 (3) | Ni—O1—C9—O1i | 0.0 |
| N1—Ni—N2—C4 | 35.8 (3) | Ni—O1—C9—C10 | 180.000 (1) |
| O1i—Ni—N2—C4 | −61.4 (3) |
| H··· | ||||
| N1—H1···O2 | 0.88 | 2.47 | 3.289 (14) | 154 |
| N1—H1···O3i | 0.88 | 2.35 | 3.181 (9) | 158 |
| N2—H2···O4ii | 0.88 | 2.50 | 3.276 (8) | 148 |
| O1w—H1w1···O1iii | 0.84 | 1.94 | 2.754 (11) | 163 |
| O1w—H1w2···O2 | 0.84 | 2.14 | 2.950 (18) | 163 |
| C3—H3 | 0.99 | 2.14 | 3.057 (13) | 153 |
| Ni—O1 | 2.118 (2) |
| Ni—N1 | 2.089 (3) |
| Ni—N2 | 2.136 (3) |
| O1i—Ni—O1 | 62.28 (13) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O2 | 0.88 | 2.47 | 3.289 (14) | 154 |
| N1—H1⋯O3i | 0.88 | 2.35 | 3.181 (9) | 158 |
| N2—H2⋯O4ii | 0.88 | 2.50 | 3.276 (8) | 148 |
| O1w—H1w1⋯O1iii | 0.84 | 1.94 | 2.754 (11) | 163 |
| O1w—H1w2⋯O2 | 0.84 | 2.14 | 2.950 (18) | 163 |
| C3—H3 | 0.99 | 2.14 | 3.057 (13) | 153 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .