| Literature DB >> 22589870 |
Chen-Guang Sun1, Ji-Rong Song.
Abstract
In the title complex, [Zn(C(10)H(8)N(5))Cl](n), the Zn(II) ion is four-coordinated by one Cl atom and three N atoms from two in situ-generated deprotonated 5-(1-methyl-1H-benzimidazol-2-yl-κN(3))-1,2,3-triazol-1-ide ligands in a slightly distorted tetra-hedral geometry. The Zn(II) ions are bridged by the ligands, forming a helical chain along [001]. C-H⋯N and C-H⋯Cl hydrogen bonds and π-π inter-actions between the imidazole rings [centroid-centroid distance = 3.4244 (10) Å] assemble the chains into a three-dimensional supra-molecular network.Entities:
Year: 2012 PMID: 22589870 PMCID: PMC3343902 DOI: 10.1107/S1600536812012706
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C10H8N5)Cl] | |
| Melting point: 178 K | |
| Tetragonal, | Mo |
| Hall symbol: -P 4bc | Cell parameters from 3164 reflections |
| θ = 2.8–27.6° | |
| µ = 2.32 mm−1 | |
| Block, yellow | |
| 0.25 × 0.20 × 0.10 mm |
| Bruker APEXII CCD diffractometer | 2511 independent reflections |
| Radiation source: fine-focus sealed tube | 2242 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.0°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 6487 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2511 reflections | (Δ/σ)max = 0.001 |
| 155 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.885173 (13) | 0.359714 (13) | 0.23661 (2) | 0.01485 (8) | |
| Cl1 | 0.98564 (3) | 0.32498 (3) | 0.08256 (5) | 0.02279 (12) | |
| N4 | 0.86431 (9) | 0.22361 (10) | 0.63125 (16) | 0.0164 (3) | |
| N1 | 0.89656 (9) | 0.46000 (9) | 0.37457 (16) | 0.0150 (3) | |
| N3 | 0.87375 (10) | 0.29967 (9) | 0.43575 (16) | 0.0158 (3) | |
| C3 | 0.88790 (11) | 0.43874 (11) | 0.51738 (19) | 0.0143 (4) | |
| N2 | 0.88891 (9) | 0.50546 (9) | 0.60836 (16) | 0.0156 (3) | |
| N5 | 0.86571 (10) | 0.22235 (10) | 0.48211 (16) | 0.0174 (3) | |
| C9 | 0.89630 (11) | 0.57556 (11) | 0.5191 (2) | 0.0171 (4) | |
| C10 | 0.87849 (13) | 0.50517 (12) | 0.7694 (2) | 0.0224 (4) | |
| H10A | 0.8203 | 0.5044 | 0.7931 | 0.034* | |
| H10B | 0.9035 | 0.5542 | 0.8106 | 0.034* | |
| H10C | 0.9048 | 0.4567 | 0.8102 | 0.034* | |
| C2 | 0.87783 (11) | 0.35173 (11) | 0.5545 (2) | 0.0146 (4) | |
| C4 | 0.90207 (11) | 0.54619 (11) | 0.3728 (2) | 0.0164 (4) | |
| C8 | 0.89762 (13) | 0.65991 (12) | 0.5530 (2) | 0.0242 (4) | |
| H8 | 0.8937 | 0.6790 | 0.6501 | 0.029* | |
| C1 | 0.87145 (12) | 0.30313 (11) | 0.6796 (2) | 0.0175 (4) | |
| H1 | 0.8719 | 0.3212 | 0.7776 | 0.021* | |
| C7 | 0.90506 (14) | 0.71385 (13) | 0.4342 (2) | 0.0294 (5) | |
| H7 | 0.9049 | 0.7708 | 0.4519 | 0.035* | |
| C6 | 0.91287 (14) | 0.68529 (13) | 0.2877 (2) | 0.0269 (5) | |
| H6 | 0.9187 | 0.7237 | 0.2113 | 0.032* | |
| C5 | 0.91205 (12) | 0.60159 (12) | 0.2543 (2) | 0.0207 (4) | |
| H5 | 0.9179 | 0.5828 | 0.1573 | 0.025* |
| Zn1 | 0.01681 (12) | 0.01827 (12) | 0.00945 (12) | −0.00095 (8) | −0.00090 (8) | 0.00094 (8) |
| Cl1 | 0.0229 (2) | 0.0266 (2) | 0.0189 (2) | −0.0002 (2) | 0.00538 (18) | −0.00207 (19) |
| N4 | 0.0217 (8) | 0.0182 (8) | 0.0093 (7) | 0.0009 (7) | 0.0008 (6) | 0.0005 (6) |
| N1 | 0.0151 (7) | 0.0163 (7) | 0.0136 (7) | −0.0006 (6) | −0.0009 (6) | 0.0009 (6) |
| N3 | 0.0202 (8) | 0.0158 (8) | 0.0115 (7) | −0.0012 (6) | −0.0002 (6) | 0.0006 (6) |
| C3 | 0.0120 (8) | 0.0170 (9) | 0.0139 (8) | −0.0010 (7) | −0.0004 (7) | −0.0008 (7) |
| N2 | 0.0168 (7) | 0.0164 (7) | 0.0137 (8) | −0.0026 (6) | −0.0004 (6) | −0.0006 (6) |
| N5 | 0.0232 (8) | 0.0181 (8) | 0.0108 (7) | −0.0002 (7) | −0.0002 (6) | 0.0029 (6) |
| C9 | 0.0143 (9) | 0.0185 (9) | 0.0185 (9) | −0.0004 (7) | −0.0013 (7) | 0.0023 (7) |
| C10 | 0.0319 (11) | 0.0227 (10) | 0.0126 (9) | −0.0054 (9) | 0.0021 (8) | −0.0028 (7) |
| C2 | 0.0142 (8) | 0.0177 (9) | 0.0119 (9) | 0.0005 (7) | −0.0002 (7) | −0.0022 (7) |
| C4 | 0.0127 (8) | 0.0177 (9) | 0.0187 (9) | −0.0018 (7) | −0.0018 (7) | 0.0013 (7) |
| C8 | 0.0301 (11) | 0.0202 (10) | 0.0222 (10) | −0.0013 (9) | −0.0004 (9) | −0.0028 (8) |
| C1 | 0.0222 (9) | 0.0181 (9) | 0.0121 (8) | 0.0004 (8) | 0.0011 (7) | −0.0018 (7) |
| C7 | 0.0396 (13) | 0.0161 (10) | 0.0325 (12) | −0.0029 (9) | −0.0025 (10) | 0.0010 (9) |
| C6 | 0.0338 (12) | 0.0214 (10) | 0.0253 (11) | −0.0045 (9) | −0.0019 (9) | 0.0084 (9) |
| C5 | 0.0210 (10) | 0.0228 (10) | 0.0184 (10) | −0.0022 (8) | −0.0020 (8) | 0.0040 (8) |
| Zn1—N4i | 1.9920 (15) | C9—C8 | 1.391 (3) |
| Zn1—N1 | 2.0445 (15) | C9—C4 | 1.404 (3) |
| Zn1—N3 | 2.0461 (15) | C10—H10A | 0.9600 |
| Zn1—Cl1 | 2.2022 (5) | C10—H10B | 0.9600 |
| N4—N5 | 1.344 (2) | C10—H10C | 0.9600 |
| N4—C1 | 1.356 (2) | C2—C1 | 1.376 (3) |
| N4—Zn1ii | 1.9920 (15) | C4—C5 | 1.400 (3) |
| N1—C3 | 1.339 (2) | C8—C7 | 1.383 (3) |
| N1—C4 | 1.389 (2) | C8—H8 | 0.9300 |
| N3—N5 | 1.318 (2) | C1—H1 | 0.9300 |
| N3—C2 | 1.360 (2) | C7—C6 | 1.403 (3) |
| C3—N2 | 1.351 (2) | C7—H7 | 0.9300 |
| C3—C2 | 1.448 (2) | C6—C5 | 1.380 (3) |
| N2—C9 | 1.390 (2) | C6—H6 | 0.9300 |
| N2—C10 | 1.461 (2) | C5—H5 | 0.9300 |
| N4i—Zn1—N1 | 109.83 (6) | N2—C10—H10B | 109.5 |
| N4i—Zn1—N3 | 110.90 (6) | H10A—C10—H10B | 109.5 |
| N1—Zn1—N3 | 81.20 (6) | N2—C10—H10C | 109.5 |
| N4i—Zn1—Cl1 | 110.69 (5) | H10A—C10—H10C | 109.5 |
| N1—Zn1—Cl1 | 121.17 (4) | H10B—C10—H10C | 109.5 |
| N3—Zn1—Cl1 | 119.94 (5) | N3—C2—C1 | 106.92 (16) |
| N5—N4—C1 | 109.51 (15) | N3—C2—C3 | 114.77 (16) |
| N5—N4—Zn1ii | 117.63 (12) | C1—C2—C3 | 138.31 (17) |
| C1—N4—Zn1ii | 132.73 (12) | N1—C4—C5 | 130.65 (18) |
| C3—N1—C4 | 105.82 (15) | N1—C4—C9 | 108.71 (16) |
| C3—N1—Zn1 | 111.95 (12) | C5—C4—C9 | 120.64 (17) |
| C4—N1—Zn1 | 141.79 (12) | C7—C8—C9 | 116.31 (18) |
| N5—N3—C2 | 109.65 (14) | C7—C8—H8 | 121.8 |
| N5—N3—Zn1 | 137.05 (12) | C9—C8—H8 | 121.8 |
| C2—N3—Zn1 | 113.26 (12) | N4—C1—C2 | 106.21 (16) |
| N1—C3—N2 | 112.29 (16) | N4—C1—H1 | 126.9 |
| N1—C3—C2 | 118.70 (16) | C2—C1—H1 | 126.9 |
| N2—C3—C2 | 128.99 (16) | C8—C7—C6 | 122.04 (19) |
| C3—N2—C9 | 107.11 (15) | C8—C7—H7 | 119.0 |
| C3—N2—C10 | 126.80 (16) | C6—C7—H7 | 119.0 |
| C9—N2—C10 | 125.97 (16) | C5—C6—C7 | 121.60 (19) |
| N3—N5—N4 | 107.71 (14) | C5—C6—H6 | 119.2 |
| N2—C9—C8 | 131.72 (17) | C7—C6—H6 | 119.2 |
| N2—C9—C4 | 106.03 (16) | C6—C5—C4 | 117.12 (18) |
| C8—C9—C4 | 122.24 (17) | C6—C5—H5 | 121.4 |
| N2—C10—H10A | 109.5 | C4—C5—H5 | 121.4 |
| H··· | ||||
| C1—H1···N5iii | 0.93 | 2.49 | 3.274 (2) | 142 |
| C10—H10 | 0.96 | 2.81 | 3.744 (2) | 165 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1⋯N5i | 0.93 | 2.49 | 3.274 (2) | 142 |
| C10—H10 | 0.96 | 2.81 | 3.744 (2) | 165 |
Symmetry codes: (i) ; (ii) .