| Literature DB >> 22589865 |
Siti Kamilah Che Soh, Mustaffa Shamsuddin, Mohd Mustaqim Rosli, Hoong-Kun Fun.
Abstract
In the title compound, [Pd(C(21)H(24)N(2)O(4))], the complete mol-ecule is generated by crystallographic mirror symmetry with the Pd and three C atoms lying on the mirror plane. The Pd-O and Pd-N distances are 1.9932 (6) and 2.0029 (7) Å, respectively. The dihedral angle between two benzene rings of the ligand is 79.21 (4)°. In the crystal, C-H⋯O hydrogen bonds link the mol-ecules into layers parallel to the ab plane. These planes are further connected by C-H⋯O inter-actions, forming a three-dimensional network.Entities:
Year: 2012 PMID: 22589865 PMCID: PMC3343897 DOI: 10.1107/S1600536812013128
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Pd(C21H24N2O4)] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2n | Cell parameters from 9824 reflections |
| θ = 3.3–35.1° | |
| µ = 1.00 mm−1 | |
| Block, yellow | |
| 0.27 × 0.24 × 0.18 mm |
| Bruker APEX DUO CCD area-detector diffractometer | 4296 independent reflections |
| Radiation source: fine-focus sealed tube | 4134 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 35.1°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 30756 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4296 reflections | (Δ/σ)max = 0.003 |
| 134 parameters | Δρmax = 0.50 e Å−3 |
| 0 restraints | Δρmin = −0.62 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Pd1 | 0.535617 (6) | 0.2500 | 0.088830 (10) | 0.00982 (2) | |
| O1 | 0.42276 (5) | 0.31425 (3) | 0.17501 (8) | 0.01411 (10) | |
| O2 | 0.12833 (5) | 0.45403 (3) | −0.02329 (9) | 0.01723 (11) | |
| N1 | 0.63494 (6) | 0.31998 (3) | −0.00483 (9) | 0.01240 (11) | |
| C1 | 0.39331 (7) | 0.36205 (4) | 0.07712 (9) | 0.01203 (11) | |
| C2 | 0.27757 (7) | 0.38427 (4) | 0.08646 (10) | 0.01310 (12) | |
| H2A | 0.2251 | 0.3651 | 0.1642 | 0.016* | |
| C3 | 0.24037 (7) | 0.43360 (4) | −0.01673 (10) | 0.01370 (12) | |
| C4 | 0.31792 (7) | 0.46562 (4) | −0.12613 (11) | 0.01645 (13) | |
| H4A | 0.2924 | 0.5004 | −0.1939 | 0.020* | |
| C5 | 0.43136 (7) | 0.44543 (4) | −0.13264 (11) | 0.01566 (13) | |
| H5A | 0.4844 | 0.4675 | −0.2038 | 0.019* | |
| C6 | 0.47127 (6) | 0.39285 (4) | −0.03651 (10) | 0.01282 (12) | |
| C7 | 0.59049 (7) | 0.37365 (4) | −0.05364 (10) | 0.01349 (12) | |
| H7A | 0.6415 | 0.4033 | −0.1059 | 0.016* | |
| C8 | 0.76027 (6) | 0.31049 (4) | −0.02515 (11) | 0.01447 (13) | |
| H8A | 0.7964 | 0.3083 | 0.0887 | 0.017* | |
| H8B | 0.7932 | 0.3479 | −0.0847 | 0.017* | |
| C9 | 0.79183 (9) | 0.2500 | −0.12444 (14) | 0.01195 (16) | |
| C10 | 0.73574 (10) | 0.2500 | −0.29972 (15) | 0.01630 (19) | |
| H10A | 0.7594 | 0.2874 | −0.3609 | 0.024* | |
| H10B | 0.6530 | 0.2500 | −0.2876 | 0.024* | |
| C11 | 0.92430 (10) | 0.2500 | −0.14109 (16) | 0.01623 (19) | |
| H11A | 0.9487 | 0.2874 | −0.2017 | 0.024* | |
| H11B | 0.9584 | 0.2500 | −0.0299 | 0.024* | |
| C12 | 0.04407 (7) | 0.41728 (5) | 0.06862 (13) | 0.01862 (15) | |
| H12A | −0.0332 | 0.4353 | 0.0496 | 0.028* | |
| H12B | 0.0622 | 0.4185 | 0.1902 | 0.028* | |
| H12C | 0.0457 | 0.3730 | 0.0288 | 0.028* |
| Pd1 | 0.00822 (4) | 0.01192 (4) | 0.00933 (4) | 0.000 | 0.00093 (2) | 0.000 |
| O1 | 0.0140 (2) | 0.0151 (2) | 0.0133 (2) | 0.00348 (18) | 0.00348 (19) | 0.00199 (19) |
| O2 | 0.0125 (2) | 0.0189 (3) | 0.0203 (3) | 0.0032 (2) | 0.0008 (2) | 0.0040 (2) |
| N1 | 0.0097 (2) | 0.0144 (3) | 0.0131 (3) | −0.0006 (2) | 0.0015 (2) | −0.0015 (2) |
| C1 | 0.0122 (3) | 0.0127 (3) | 0.0112 (3) | 0.0005 (2) | 0.0008 (2) | −0.0011 (2) |
| C2 | 0.0122 (3) | 0.0141 (3) | 0.0130 (3) | 0.0013 (2) | 0.0015 (2) | 0.0002 (2) |
| C3 | 0.0129 (3) | 0.0144 (3) | 0.0137 (3) | 0.0016 (2) | −0.0001 (2) | −0.0007 (2) |
| C4 | 0.0165 (3) | 0.0157 (3) | 0.0172 (3) | 0.0016 (2) | 0.0013 (3) | 0.0036 (3) |
| C5 | 0.0163 (3) | 0.0145 (3) | 0.0162 (3) | 0.0001 (2) | 0.0027 (3) | 0.0021 (2) |
| C6 | 0.0121 (3) | 0.0128 (3) | 0.0135 (3) | 0.0000 (2) | 0.0017 (2) | 0.0001 (2) |
| C7 | 0.0126 (3) | 0.0138 (3) | 0.0140 (3) | −0.0013 (2) | 0.0020 (2) | −0.0007 (2) |
| C8 | 0.0089 (3) | 0.0173 (3) | 0.0171 (3) | −0.0012 (2) | 0.0013 (2) | −0.0035 (3) |
| C9 | 0.0088 (4) | 0.0152 (4) | 0.0119 (4) | 0.000 | 0.0012 (3) | 0.000 |
| C10 | 0.0142 (4) | 0.0232 (5) | 0.0115 (4) | 0.000 | 0.0000 (3) | 0.000 |
| C11 | 0.0097 (4) | 0.0200 (5) | 0.0189 (5) | 0.000 | 0.0025 (4) | 0.000 |
| C12 | 0.0132 (3) | 0.0195 (4) | 0.0232 (4) | 0.0009 (3) | 0.0012 (3) | 0.0018 (3) |
| Pd1—O1i | 1.9932 (6) | C5—H5A | 0.9500 |
| Pd1—O1 | 1.9932 (6) | C6—C7 | 1.4406 (11) |
| Pd1—N1i | 2.0029 (7) | C7—H7A | 0.9500 |
| Pd1—N1 | 2.0029 (7) | C8—C9 | 1.5337 (10) |
| O1—C1 | 1.3092 (9) | C8—H8A | 0.9900 |
| O2—C3 | 1.3637 (10) | C8—H8B | 0.9900 |
| O2—C12 | 1.4366 (11) | C9—C10 | 1.5244 (16) |
| N1—C7 | 1.2951 (10) | C9—C8i | 1.5336 (10) |
| N1—C8 | 1.4695 (10) | C9—C11 | 1.5353 (15) |
| C1—C2 | 1.4172 (11) | C10—H10A | 0.9600 |
| C1—C6 | 1.4239 (11) | C10—H10B | 0.9600 |
| C2—C3 | 1.3835 (11) | C11—H11A | 0.9599 |
| C2—H2A | 0.9500 | C11—H11B | 0.9600 |
| C3—C4 | 1.4122 (12) | C12—H12A | 0.9800 |
| C4—C5 | 1.3776 (12) | C12—H12B | 0.9800 |
| C4—H4A | 0.9500 | C12—H12C | 0.9800 |
| C5—C6 | 1.4144 (11) | ||
| O1i—Pd1—O1 | 85.03 (3) | C1—C6—C7 | 122.43 (7) |
| O1i—Pd1—N1i | 90.27 (3) | N1—C7—C6 | 126.41 (7) |
| O1—Pd1—N1i | 174.10 (3) | N1—C7—H7A | 116.8 |
| O1i—Pd1—N1 | 174.10 (3) | C6—C7—H7A | 116.8 |
| O1—Pd1—N1 | 90.27 (3) | N1—C8—C9 | 113.67 (7) |
| N1i—Pd1—N1 | 94.20 (4) | N1—C8—H8A | 108.8 |
| C1—O1—Pd1 | 119.13 (5) | C9—C8—H8A | 108.8 |
| C3—O2—C12 | 117.06 (7) | N1—C8—H8B | 108.8 |
| C7—N1—C8 | 118.40 (7) | C9—C8—H8B | 108.8 |
| C7—N1—Pd1 | 121.25 (5) | H8A—C8—H8B | 107.7 |
| C8—N1—Pd1 | 120.32 (5) | C10—C9—C8i | 111.13 (6) |
| O1—C1—C2 | 117.78 (7) | C10—C9—C8 | 111.13 (6) |
| O1—C1—C6 | 123.55 (7) | C8i—C9—C8 | 111.56 (9) |
| C2—C1—C6 | 118.67 (7) | C10—C9—C11 | 110.24 (9) |
| C3—C2—C1 | 120.53 (7) | C8i—C9—C11 | 106.28 (6) |
| C3—C2—H2A | 119.7 | C8—C9—C11 | 106.28 (6) |
| C1—C2—H2A | 119.7 | C9—C10—H10A | 109.5 |
| O2—C3—C2 | 123.47 (7) | C9—C10—H10B | 109.5 |
| O2—C3—C4 | 115.41 (7) | H10A—C10—H10B | 109.5 |
| C2—C3—C4 | 121.11 (7) | C9—C11—H11A | 109.6 |
| C5—C4—C3 | 118.66 (7) | C9—C11—H11B | 109.3 |
| C5—C4—H4A | 120.7 | H11A—C11—H11B | 109.5 |
| C3—C4—H4A | 120.7 | O2—C12—H12A | 109.5 |
| C4—C5—C6 | 121.96 (7) | O2—C12—H12B | 109.5 |
| C4—C5—H5A | 119.0 | H12A—C12—H12B | 109.5 |
| C6—C5—H5A | 119.0 | O2—C12—H12C | 109.5 |
| C5—C6—C1 | 118.93 (7) | H12A—C12—H12C | 109.5 |
| C5—C6—C7 | 118.62 (7) | H12B—C12—H12C | 109.5 |
| O1i—Pd1—O1—C1 | −132.69 (5) | C3—C4—C5—C6 | 1.59 (13) |
| N1—Pd1—O1—C1 | 43.75 (6) | C4—C5—C6—C1 | −3.42 (13) |
| O1—Pd1—N1—C7 | −29.00 (6) | C4—C5—C6—C7 | 178.41 (8) |
| N1i—Pd1—N1—C7 | 147.14 (5) | O1—C1—C6—C5 | −177.99 (7) |
| O1—Pd1—N1—C8 | 153.13 (6) | C2—C1—C6—C5 | 1.59 (11) |
| N1i—Pd1—N1—C8 | −30.72 (7) | O1—C1—C6—C7 | 0.11 (12) |
| Pd1—O1—C1—C2 | 144.53 (6) | C2—C1—C6—C7 | 179.69 (7) |
| Pd1—O1—C1—C6 | −35.88 (10) | C8—N1—C7—C6 | −176.76 (8) |
| O1—C1—C2—C3 | −178.41 (7) | Pd1—N1—C7—C6 | 5.33 (11) |
| C6—C1—C2—C3 | 1.98 (11) | C5—C6—C7—N1 | −164.51 (8) |
| C12—O2—C3—C2 | −6.96 (12) | C1—C6—C7—N1 | 17.38 (13) |
| C12—O2—C3—C4 | 171.91 (8) | C7—N1—C8—C9 | −125.73 (8) |
| C1—C2—C3—O2 | 174.91 (7) | Pd1—N1—C8—C9 | 52.19 (9) |
| C1—C2—C3—C4 | −3.90 (12) | N1—C8—C9—C10 | 57.06 (10) |
| O2—C3—C4—C5 | −176.79 (8) | N1—C8—C9—C8i | −67.56 (11) |
| C2—C3—C4—C5 | 2.11 (13) | N1—C8—C9—C11 | 177.01 (7) |
| H··· | ||||
| C8—H8 | 0.99 | 2.37 | 3.3355 (10) | 166 |
| C12—H12 | 0.98 | 2.58 | 3.3719 (12) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8 | 0.99 | 2.37 | 3.3355 (10) | 166 |
| C12—H12 | 0.98 | 2.58 | 3.3719 (12) | 138 |
Symmetry codes: (i) ; (ii) .