Literature DB >> 22589785

Diaqua-bis-(propane-1,3-diamine)-nickel(II) bis-(propane-1,3-diamine)-disulfato-nickelate(II).

Julia A Rusanova1.   

Abstract

The ionic Ni(II) title complex, [Ni(C(3)H(10)N(2))(2)(H(2)O)(2)][Ni(SO(4))(2)(C(3)H(10)N(2))(2)], is built up of [Ni(dipr)(2)(H(2)O)(2)](2+) complex cations and [Ni(dipr)(2)(SO(4))(2)](2-) complex anions (dipr is propane-1,3-diamine). Both Ni(II) atoms display a slightly distorted octa-hedral coordination and are located on inversion centers. There are several types of hydrogen-bonding inter-actions, which connect complex cations and anions into a two-dimensional network parallel to (010). Hydrogen bonds formed by the axially coordinated water mol-ecule of the complex cation and one of the O atoms of the sulfate groups of the complex anion (first type) link them into chains along the c axis. These chains are linked to each other through hydrogen bonds formed by an O atom (second type) of the SO(4) groups and NH(2) groups of the ligand of the complex cations from neighboring chains, forming a two-dimensional hydrogen-bonded net perpendicular to the b axis. The third type of O atoms of the sulfate groups of the complex anion are also linked into chains by a combination of both previously described types of H-atom connections.

Entities:  

Year:  2012        PMID: 22589785      PMCID: PMC3343811          DOI: 10.1107/S1600536812009750

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to direct synthesis, see: Nesterov et al. (2004 ▶, 2006 ▶); Kovbasyuk et al. (1997 ▶, 1998 ▶); Vassilyeva et al. (1997 ▶). For the structures of related complexes, see: Clegg et al. (1992 ▶); Kim & Lee (2002 ▶); Fritsky et al. (2004 ▶); Nowicka et al. (2002 ▶); Stockner et al. (2007 ▶); Duesler & Raymond (1978 ▶); Jurnak & Raymond (1974 ▶); Solans et al. (1982 ▶).

Experimental

Crystal data

[Ni(C3H10N2)2(H2O)2][Ni(SO4)2(C3H10N2)2] M = 642.1 Triclinic, a = 6.7055 (1) Å b = 8.9098 (2) Å c = 11.9504 (4) Å α = 103.016 (2)° β = 103.795 (2)° γ = 105.729 (1)° V = 634.52 (3) Å3 Z = 1 Mo Kα radiation μ = 1.71 mm−1 T = 296 K 0.49 × 0.15 × 0.12 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: numerical (SADABS; Sheldrick, 2009 ▶) T min = 0.488, T max = 0.703 10425 measured reflections 3078 independent reflections 2728 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.063 S = 1.07 3078 reflections 197 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812009750/br2192sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009750/br2192Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C3H10N2)2(H2O)2][Ni(SO4)2(C3H10N2)2]Z = 1
Mr = 642.1F(000) = 340
Triclinic, P1Dx = 1.680 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.7055 (1) ÅCell parameters from 5917 reflections
b = 8.9098 (2) Åθ = 2.5–28.2°
c = 11.9504 (4) ŵ = 1.71 mm1
α = 103.016 (2)°T = 296 K
β = 103.795 (2)°Prism, light blue
γ = 105.729 (1)°0.49 × 0.15 × 0.12 mm
V = 634.52 (3) Å3
Bruker APEXII CCD area-detector diffractometer3078 independent reflections
Radiation source: fine-focus sealed tube2728 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
phi and ω scansθmax = 28.2°, θmin = 2.5°
Absorption correction: numerical (SADABS; Sheldrick, 2009)h = −8→7
Tmin = 0.488, Tmax = 0.703k = −11→10
10425 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.063H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0341P)2 + 0.0694P] where P = (Fo2 + 2Fc2)/3
3078 reflections(Δ/σ)max = 0.006
197 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.37 e Å3
12 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50001.00000.00000.01064 (8)
Ni20.50001.00000.50000.01320 (8)
S10.89097 (6)1.01326 (4)0.23292 (3)0.01404 (9)
O10.70097 (16)1.06228 (13)0.18226 (9)0.0155 (2)
O21.05971 (18)1.06347 (15)0.17662 (11)0.0263 (3)
O30.97660 (18)1.09600 (14)0.36389 (10)0.0240 (3)
O40.8164 (2)0.83460 (14)0.20784 (11)0.0287 (3)
O50.4535 (2)1.07096 (17)0.33786 (11)0.0246 (3)
N10.2544 (2)0.83826 (16)0.03946 (12)0.0175 (3)
N20.6059 (2)0.80081 (15)−0.05714 (12)0.0155 (3)
N30.6379 (2)0.82954 (16)0.43334 (13)0.0165 (3)
N40.1851 (2)0.82026 (17)0.43194 (13)0.0180 (3)
C10.1280 (2)0.67732 (18)−0.05413 (15)0.0203 (3)
H1A0.06030.6943−0.12940.024*
H1B0.01260.6173−0.02850.024*
C20.2734 (3)0.57695 (18)−0.07559 (15)0.0222 (3)
H2A0.18110.4660−0.12530.027*
H2B0.35240.57130.00180.027*
C30.4379 (3)0.64240 (18)−0.13651 (14)0.0200 (3)
H3A0.50840.5631−0.15700.024*
H3B0.36180.6566−0.21120.024*
C40.5382 (3)0.65484 (19)0.42206 (15)0.0226 (3)
H4A0.55510.64370.50240.027*
H4B0.61510.59210.38390.027*
C50.2966 (3)0.5844 (2)0.34818 (16)0.0264 (4)
H5A0.27740.61340.27380.032*
H5B0.24890.46570.32630.032*
C60.1537 (3)0.64477 (19)0.41474 (16)0.0246 (4)
H6A0.00170.58030.36960.030*
H6B0.18560.62750.49340.030*
H10.667 (3)0.788 (2)0.0068 (17)0.018 (5)*
H20.707 (3)0.830 (2)−0.0962 (16)0.018 (4)*
H30.319 (3)0.826 (2)0.1079 (18)0.030 (5)*
H40.165 (3)0.882 (2)0.0580 (18)0.031 (6)*
H50.765 (3)0.868 (2)0.4867 (18)0.023 (5)*
H60.663 (3)0.836 (2)0.3633 (18)0.029 (5)*
H70.127 (3)0.852 (2)0.490 (2)0.037 (6)*
H80.122 (3)0.828 (2)0.3723 (18)0.022 (5)*
H90.533 (4)1.078 (3)0.295 (2)0.041 (6)*
H100.357 (4)1.070 (3)0.299 (2)0.042 (7)*
U11U22U33U12U13U23
Ni10.00944 (13)0.01273 (13)0.01009 (13)0.00461 (10)0.00306 (10)0.00329 (10)
Ni20.01046 (13)0.01788 (14)0.01234 (14)0.00583 (10)0.00410 (10)0.00503 (10)
S10.01275 (17)0.02077 (18)0.01136 (17)0.00832 (14)0.00423 (14)0.00661 (14)
O10.0124 (5)0.0248 (5)0.0122 (5)0.0096 (4)0.0042 (4)0.0067 (4)
O20.0192 (6)0.0456 (7)0.0277 (6)0.0188 (5)0.0154 (5)0.0192 (6)
O30.0206 (6)0.0370 (6)0.0124 (5)0.0131 (5)0.0019 (5)0.0036 (5)
O40.0374 (7)0.0228 (6)0.0256 (6)0.0128 (5)0.0043 (6)0.0099 (5)
O50.0158 (6)0.0495 (8)0.0182 (6)0.0175 (6)0.0084 (5)0.0176 (5)
N10.0169 (6)0.0183 (6)0.0196 (7)0.0065 (5)0.0085 (6)0.0067 (5)
N20.0158 (6)0.0186 (6)0.0140 (6)0.0085 (5)0.0051 (5)0.0052 (5)
N30.0129 (6)0.0215 (6)0.0152 (7)0.0070 (5)0.0037 (6)0.0052 (5)
N40.0143 (6)0.0239 (7)0.0164 (7)0.0073 (5)0.0040 (6)0.0070 (5)
C10.0156 (7)0.0162 (7)0.0260 (8)0.0015 (6)0.0050 (7)0.0071 (6)
C20.0254 (8)0.0139 (7)0.0264 (9)0.0059 (6)0.0076 (7)0.0059 (6)
C30.0225 (8)0.0172 (7)0.0182 (8)0.0082 (6)0.0054 (7)0.0012 (6)
C40.0214 (8)0.0214 (8)0.0251 (8)0.0108 (6)0.0052 (7)0.0052 (6)
C50.0225 (8)0.0209 (8)0.0279 (9)0.0056 (6)0.0027 (7)0.0005 (7)
C60.0181 (8)0.0224 (8)0.0299 (9)0.0033 (6)0.0062 (7)0.0079 (7)
Ni1—N1i2.0978 (13)N2—H20.923 (19)
Ni1—N12.0978 (13)N3—C41.479 (2)
Ni1—N2i2.1187 (13)N3—H50.86 (2)
Ni1—N22.1187 (13)N3—H60.90 (2)
Ni1—O1i2.1257 (10)N4—C61.479 (2)
Ni1—O12.1257 (10)N4—H70.91 (2)
Ni2—N3ii2.0893 (13)N4—H80.76 (2)
Ni2—N32.0893 (13)C1—C21.518 (2)
Ni2—N4ii2.1083 (13)C1—H1A0.9700
Ni2—N42.1083 (13)C1—H1B0.9700
Ni2—O52.1499 (12)C2—C31.521 (2)
Ni2—O5ii2.1499 (12)C2—H2A0.9700
S1—O31.4645 (11)C2—H2B0.9700
S1—O41.4682 (12)C3—H3A0.9700
S1—O21.4688 (11)C3—H3B0.9700
S1—O11.4945 (10)C4—C51.521 (2)
O5—H90.82 (2)C4—H4A0.9700
O5—H100.70 (2)C4—H4B0.9700
N1—C11.4806 (19)C5—C61.514 (2)
N1—H30.88 (2)C5—H5A0.9700
N1—H40.84 (2)C5—H5B0.9700
N2—C31.4785 (19)C6—H6A0.9700
N2—H10.823 (19)C6—H6B0.9700
N1i—Ni1—N1180.0Ni1—N2—H2109.3 (11)
N1i—Ni1—N2i87.81 (5)H1—N2—H2109.5 (16)
N1—Ni1—N2i92.19 (5)C4—N3—Ni2120.00 (10)
N1i—Ni1—N292.19 (5)C4—N3—H5108.9 (13)
N1—Ni1—N287.81 (5)Ni2—N3—H5100.4 (12)
N2i—Ni1—N2180.0C4—N3—H6108.8 (12)
N1i—Ni1—O1i88.28 (5)Ni2—N3—H6112.6 (13)
N1—Ni1—O1i91.72 (5)H5—N3—H6104.8 (17)
N2i—Ni1—O1i92.13 (5)C6—N4—Ni2121.41 (10)
N2—Ni1—O1i87.87 (5)C6—N4—H7106.6 (13)
N1i—Ni1—O191.72 (5)Ni2—N4—H7101.2 (13)
N1—Ni1—O188.28 (5)C6—N4—H8107.8 (14)
N2i—Ni1—O187.87 (5)Ni2—N4—H8109.4 (14)
N2—Ni1—O192.13 (5)H7—N4—H8110 (2)
O1i—Ni1—O1180.00 (6)N1—C1—C2111.30 (13)
N3ii—Ni2—N3180.000 (1)N1—C1—H1A109.4
N3ii—Ni2—N4ii91.66 (5)C2—C1—H1A109.4
N3—Ni2—N4ii88.34 (5)N1—C1—H1B109.4
N3ii—Ni2—N488.34 (5)C2—C1—H1B109.4
N3—Ni2—N491.66 (5)H1A—C1—H1B108.0
N4ii—Ni2—N4180.00 (7)C1—C2—C3115.06 (13)
N3ii—Ni2—O587.79 (5)C1—C2—H2A108.5
N3—Ni2—O592.21 (5)C3—C2—H2A108.5
N4ii—Ni2—O587.84 (5)C1—C2—H2B108.5
N4—Ni2—O592.16 (5)C3—C2—H2B108.5
N3ii—Ni2—O5ii92.21 (5)H2A—C2—H2B107.5
N3—Ni2—O5ii87.79 (5)N2—C3—C2111.60 (13)
N4ii—Ni2—O5ii92.16 (5)N2—C3—H3A109.3
N4—Ni2—O5ii87.84 (5)C2—C3—H3A109.3
O5—Ni2—O5ii180.000 (1)N2—C3—H3B109.3
O3—S1—O4110.23 (7)C2—C3—H3B109.3
O3—S1—O2110.28 (7)H3A—C3—H3B108.0
O4—S1—O2109.99 (7)N3—C4—C5112.50 (13)
O3—S1—O1107.70 (6)N3—C4—H4A109.1
O4—S1—O1109.11 (7)C5—C4—H4A109.1
O2—S1—O1109.48 (6)N3—C4—H4B109.1
S1—O1—Ni1130.04 (6)C5—C4—H4B109.1
Ni2—O5—H9127.9 (16)H4A—C4—H4B107.8
Ni2—O5—H10128.6 (19)C6—C5—C4113.29 (14)
H9—O5—H10101 (2)C6—C5—H5A108.9
C1—N1—Ni1116.97 (10)C4—C5—H5A108.9
C1—N1—H3110.9 (12)C6—C5—H5B108.9
Ni1—N1—H3105.9 (13)C4—C5—H5B108.9
C1—N1—H4108.0 (13)H5A—C5—H5B107.7
Ni1—N1—H4111.9 (13)N4—C6—C5113.15 (13)
H3—N1—H4102.2 (18)N4—C6—H6A108.9
C3—N2—Ni1117.85 (10)C5—C6—H6A108.9
C3—N2—H1108.5 (12)N4—C6—H6B108.9
Ni1—N2—H1103.6 (12)C5—C6—H6B108.9
C3—N2—H2107.8 (11)H6A—C6—H6B107.8
D—H···AD—HH···AD···AD—H···A
O5—H9···O10.82 (2)1.96 (2)2.7739 (16)172 (2)
N2—H1···O40.823 (19)2.265 (19)3.0528 (18)160.4 (16)
N1—H4···O2iii0.84 (2)2.28 (2)3.0621 (18)154.9 (18)
O5—H10···O2iii0.70 (2)2.15 (3)2.8476 (18)179 (3)
N3—H5···O3iv0.86 (2)2.06 (2)2.8900 (17)161.4 (17)
N2—H2···O2v0.923 (19)2.145 (19)3.0600 (17)171.2 (15)
N4—H7···O3ii0.91 (2)2.03 (2)2.9269 (18)170 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H9⋯O10.82 (2)1.96 (2)2.7739 (16)172 (2)
N2—H1⋯O40.823 (19)2.265 (19)3.0528 (18)160.4 (16)
N1—H4⋯O2i0.84 (2)2.28 (2)3.0621 (18)154.9 (18)
O5—H10⋯O2i0.70 (2)2.15 (3)2.8476 (18)179 (3)
N3—H5⋯O3ii0.86 (2)2.06 (2)2.8900 (17)161.4 (17)
N2—H2⋯O2iii0.923 (19)2.145 (19)3.0600 (17)171.2 (15)
N4—H7⋯O3iv0.91 (2)2.03 (2)2.9269 (18)170 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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