Literature DB >> 22589782

Tris(ethyl-enediamine-κ(2)N,N')cadmium hexa-fluoridogermanate.

Guo-Ming Wang, Zeng-Xin Li, Pei Wang.   

Abstract

In the title compound, [Cd(C(2)n class="Species">H(8)N(2))(3)](GeF(6)), the Cd(II) atom, lying on a 32 symmetry site, is coordinated by six N atoms from three ethyl-enediamine (en) ligands in a distorted octa-hedral geometry. The Ge atom also lies on a 32 symmetry site and is coordinated by six F atoms. The en ligand has a twofold rotation axis passing through the mid-point of the C-C bond. The F atom is disordered over two sites with equal occupancy factors. In the crystal, the [Cd(en)(3)](2+) cations and [GeF(6)](2-) anions are connected through N-H⋯F hydrogen bonds, forming a three-dimensional supra-molecular network.

Entities:  

Year:  2012        PMID: 22589782      PMCID: PMC3343808          DOI: 10.1107/S160053681200983X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the structures and applications of microporous materials, see: Cheetham et al. (1999 ▶); Jiang et al. (2010 ▶); Liang et al. (2006 ▶); Yu & Xu (2003 ▶); Zou et al. (2005 ▶). For related fluorides, see: Brauer et al. (1980 ▶, 1986 ▶); Dadachov et al. (2001 ▶); Lukevics et al. (1997 ▶); Tang et al. (2001a ▶,b ▶,c ▶,d ▶,e ▶,f ▶); Wang et al. (2004 ▶); Wang & Wang (2011 ▶); Zhang et al. (2003 ▶). For related structures containing chiral n class="Chemical">metal complexes, see: Stalder & Wilkinson (1997 ▶); Wang et al. (2003 ▶); Yu et al. (2001 ▶).

Experimental

Crystal data

[Cd(C2n class="Species">H8N2)3](GeF6) M = 479.33 Trigonal, a = 9.5422 (3) Å c = 9.9977 (5) Å V = 788.37 (7) Å3 Z = 2 Mo Kα radiation μ = 3.32 mm−1 T = 293 K 0.20 × 0.18 × 0.12 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.557, T max = 0.692 7348 measured reflections 549 independn class="Chemical">ent reflections 496 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.038 S = 1.16 549 reflections 42 parameters 12 restraints H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAIn class="Chemical">NT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681200983X/hy2520sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681200983X/hy2520Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd(C2H8N2)3](GeF6)Dx = 2.019 Mg m3
Mr = 479.33Mo Kα radiation, λ = 0.71073 Å
Trigonal, P31cCell parameters from 549 reflections
Hall symbol: -P 3 2cθ = 4.1–26.5°
a = 9.5422 (3) ŵ = 3.32 mm1
c = 9.9977 (5) ÅT = 293 K
V = 788.37 (7) Å3Block, colorless
Z = 20.20 × 0.18 × 0.12 mm
F(000) = 472
Bruker APEX CCD diffractometer549 independent reflections
Radiation source: fine-focus sealed tube496 reflections with I > 2σa(I)
Graphite monochromatorRint = 0.038
φ and ω scansθmax = 26.5°, θmin = 4.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.557, Tmax = 0.692k = −11→11
7348 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024H-atom parameters constrained
wR(F2) = 0.038w = 1/[σ2(Fo2) + (0.0048P)2 + 0.9629P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max < 0.001
549 reflectionsΔρmax = 0.23 e Å3
42 parametersΔρmin = −0.23 e Å3
12 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0045 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cd10.33330.66670.25000.03249 (17)
Ge10.66670.33330.25000.02960 (19)
N10.2829 (3)0.4387 (3)0.1196 (2)0.0444 (6)
H1C0.26370.45380.03410.053*
H1D0.36980.42540.12120.053*
C10.1425 (4)0.2956 (4)0.1743 (3)0.0504 (8)
H1A0.13810.19890.13880.060*
H1B0.04430.29490.14790.060*
F10.5391 (11)0.3708 (8)0.1387 (10)0.065 (2)0.50
F1'0.5004 (11)0.2974 (8)0.1521 (10)0.064 (2)0.50
U11U22U33U12U13U23
Cd10.0326 (2)0.0326 (2)0.0323 (3)0.01630 (10)0.0000.000
Ge10.0312 (3)0.0312 (3)0.0264 (4)0.01559 (13)0.0000.000
N10.0559 (17)0.0475 (16)0.0364 (13)0.0309 (14)−0.0008 (12)−0.0037 (12)
C10.056 (2)0.0397 (18)0.0518 (18)0.0214 (16)−0.0092 (16)−0.0112 (14)
F10.074 (5)0.092 (5)0.051 (3)0.058 (4)−0.012 (3)0.001 (4)
F1'0.049 (4)0.098 (5)0.049 (3)0.040 (4)−0.021 (3)−0.010 (4)
Cd1—N1i2.370 (2)Ge1—F1vi1.812 (9)
Cd1—N1ii2.370 (2)Ge1—F1viii1.812 (9)
Cd1—N1iii2.370 (2)Ge1—F1ix1.812 (9)
Cd1—N12.370 (2)Ge1—F1v1.812 (9)
Cd1—N1iv2.370 (2)Ge1—F11.812 (9)
Cd1—N1v2.370 (2)N1—C11.459 (4)
Ge1—F1'vi1.746 (9)N1—H1C0.9000
Ge1—F1'vii1.746 (9)N1—H1D0.9000
Ge1—F1'viii1.746 (9)C1—C1iii1.518 (6)
Ge1—F1'v1.746 (9)C1—H1A0.9700
Ge1—F1'ix1.746 (9)C1—H1B0.9700
Ge1—F1'1.746 (9)F1—F1'0.621 (10)
Ge1—F1vii1.812 (9)
N1i—Cd1—N1ii74.72 (12)F1'ix—Ge1—F1viii176.1 (7)
N1i—Cd1—N1iii92.62 (8)F1'—Ge1—F1viii91.4 (3)
N1ii—Cd1—N1iii103.54 (12)F1vii—Ge1—F1viii86.2 (5)
N1i—Cd1—N1159.72 (12)F1vi—Ge1—F1viii82.4 (6)
N1ii—Cd1—N192.62 (8)F1'vi—Ge1—F1ix73.7 (3)
N1iii—Cd1—N174.72 (12)F1'vii—Ge1—F1ix90.6 (2)
N1i—Cd1—N1iv103.54 (12)F1'viii—Ge1—F1ix176.1 (7)
N1ii—Cd1—N1iv92.62 (8)F1'v—Ge1—F1ix91.4 (3)
N1iii—Cd1—N1iv159.72 (12)F1'—Ge1—F1ix100.8 (2)
N1—Cd1—N1iv92.62 (8)F1vii—Ge1—F1ix82.4 (6)
N1i—Cd1—N1v92.62 (8)F1vi—Ge1—F1ix86.2 (5)
N1ii—Cd1—N1v159.72 (12)F1viii—Ge1—F1ix160.3 (5)
N1iii—Cd1—N1v92.62 (8)F1'vi—Ge1—F1v176.1 (7)
N1—Cd1—N1v103.54 (12)F1'vii—Ge1—F1v100.8 (2)
N1iv—Cd1—N1v74.72 (12)F1'viii—Ge1—F1v73.7 (3)
F1'vi—Ge1—F1'vii76.2 (6)F1'ix—Ge1—F1v91.4 (3)
F1'vi—Ge1—F1'viii103.8 (6)F1'—Ge1—F1v90.6 (2)
F1'vii—Ge1—F1'viii91.7 (5)F1vii—Ge1—F1v86.2 (5)
F1'vi—Ge1—F1'v160.4 (5)F1vi—Ge1—F1v160.3 (5)
F1'vii—Ge1—F1'v91.7 (5)F1viii—Ge1—F1v86.2 (5)
F1'viii—Ge1—F1'v91.7 (5)F1ix—Ge1—F1v108.8 (5)
F1'vi—Ge1—F1'ix91.7 (5)F1'vi—Ge1—F1100.8 (2)
F1'vii—Ge1—F1'ix103.8 (6)F1'vii—Ge1—F1176.1 (7)
F1'viii—Ge1—F1'ix160.4 (5)F1'viii—Ge1—F191.4 (3)
F1'v—Ge1—F1'ix76.2 (6)F1'v—Ge1—F190.6 (2)
F1'vi—Ge1—F1'91.7 (5)F1'ix—Ge1—F173.7 (3)
F1'vii—Ge1—F1'160.4 (5)F1vii—Ge1—F1160.3 (5)
F1'viii—Ge1—F1'76.2 (6)F1vi—Ge1—F186.2 (5)
F1'v—Ge1—F1'103.8 (6)F1viii—Ge1—F1108.8 (5)
F1'ix—Ge1—F1'91.7 (5)F1ix—Ge1—F186.2 (5)
F1'vi—Ge1—F1vii91.4 (3)F1v—Ge1—F182.4 (6)
F1'viii—Ge1—F1vii100.8 (2)C1—N1—Cd1108.83 (17)
F1'v—Ge1—F1vii73.7 (3)C1—N1—H1C109.9
F1'ix—Ge1—F1vii90.6 (2)Cd1—N1—H1C109.9
F1'—Ge1—F1vii176.1 (7)C1—N1—H1D109.9
F1'vii—Ge1—F1vi91.4 (3)Cd1—N1—H1D109.9
F1'viii—Ge1—F1vi90.6 (2)H1C—N1—H1D108.3
F1'v—Ge1—F1vi176.1 (7)N1—C1—C1iii110.1 (2)
F1'ix—Ge1—F1vi100.8 (2)N1—C1—H1A109.6
F1'—Ge1—F1vi73.7 (3)C1iii—C1—H1A109.6
F1vii—Ge1—F1vi108.8 (5)N1—C1—H1B109.6
F1'vi—Ge1—F1viii90.6 (2)C1iii—C1—H1B109.6
F1'vii—Ge1—F1viii73.7 (3)H1A—C1—H1B108.2
F1'v—Ge1—F1viii100.8 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1C···F1x0.902.283.135 (11)158
N1—H1C···F1′x0.902.062.959 (11)173
N1—H1D···F10.901.942.831 (11)172
N1—H1D···F1′0.902.163.005 (11)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1C⋯F1i0.902.283.135 (11)158
N1—H1C⋯F1′i0.902.062.959 (11)173
N1—H1D⋯F10.901.942.831 (11)172
N1—H1D⋯F1′0.902.163.005 (11)156

Symmetry code: (i) .

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