Literature DB >> 22582377

Genome sequence of Pantoea sp. strain Sc 1, an opportunistic cotton pathogen.

Enrique G Medrano1, Alois A Bell.   

Abstract

Pantoea is comprised of a broad spectrum of species, including plant pathogens. Here, we provide an annotated genome sequence of Pantoea sp. strain Sc 1, which was isolated from a diseased cotton boll. This research provides the first genome sequence of a bona fide Pantoea sp. insect-vectored cotton pathogen.

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Year:  2012        PMID： 22582377      PMCID： PMC3370639          DOI： 10.1128/JB.00450-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Application of whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification and clustering analysis of pantoea species.

Authors:  Fabio Rezzonico; Guido Vogel; Brion Duffy; Mauro Tonolla
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepacia.

Authors:  Amanda S Engledow; Enrique G Medrano; Eshwar Mahenthiralingam; John J LiPuma; Carlos F Gonzalez
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

3.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

4.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Role of Pantoea agglomerans in opportunistic bacterial seed and boll rot of cotton (Gossypium hirsutum) grown in the field.

Authors:  E G Medrano; A A Bell
Journal:  J Appl Microbiol       Date:  2007-01       Impact factor: 3.772

7.  Transmission of cotton seed and boll rotting bacteria by the southern green stink bug (Nezara viridula L.).

Authors:  E G Medrano; J F Esquivel; A A Bell
Journal:  J Appl Microbiol       Date:  2007-08       Impact factor: 3.772

8.  Comparative genomics of the Type VI secretion systems of Pantoea and Erwinia species reveals the presence of putative effector islands that may be translocated by the VgrG and Hcp proteins.

Authors:  Pieter De Maayer; Stephanus N Venter; Tim Kamber; Brion Duffy; Teresa A Coutinho; Theo H M Smits
Journal:  BMC Genomics       Date:  2011-11-24       Impact factor: 3.969

9.  GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses.

Authors:  John Besemer; Mark Borodovsky
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

10.  Genotypic comparison of Pantoea agglomerans plant and clinical strains.

Authors:  Fabio Rezzonico; Theo H M Smits; Emilio Montesinos; Jürg E Frey; Brion Duffy
Journal:  BMC Microbiol       Date:  2009-09-22       Impact factor: 3.605
  10 in total
  3 in total

1.  Genome Sequence of Pantoea ananatis Strain CFH 7-1, Which Is Associated with a Vector-Borne Cotton Fruit Disease.

Authors:  Enrique G Medrano; Alois A Bell
Journal:  Genome Announc       Date:  2015-09-10

2.  Complete Genome Sequence of a Klebsiella pneumoniae Strain Isolated from a Known Cotton Insect Boll Vector.

Authors:  Enrique G Medrano; Marissa M Forray; Alois A Bell
Journal:  Genome Announc       Date:  2014-08-21

3.  The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.

Authors:  Pieter De Maayer; Wai-Yin Chan; Jochen Blom; Stephanus N Venter; Brion Duffy; Theo H M Smits; Teresa A Coutinho
Journal:  BMC Genomics       Date:  2012-11-15       Impact factor: 3.969
  3 in total

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