Literature DB >> 22580308

Analysis of expressed sequence tags from the antarctic psychrophilic green algae, Pyramimonas gelidicola.

Woongsic Jung1, Sung Gu Lee, Se Won Kang, Yong Seok Lee, Jun Hyuck Lee, Sung-Ho Kang, Eon Seon Jin, Hak Jun Kim.   

Abstract

Expressed sequence tags (ESTs) from the Antarctic green algae Pyramimonas gelidicola were analyzed to obtain molecular information on cold acclimation of psychrophilic microorganisms. A total of 2,112 EST clones were sequenced, generating 222 contigs and 219 singletons, and 200 contigs and 391 singletons from control (4 degrees C) and cold-shock conditions (-2 degrees C), respectively. The complete EST sequences were deposited to the DDBJ EST database (http:// www.ddbj.nig.ac.jp/index-e.html) and the nucleotide sequences reported in this study are available in the DDBJ/EMBL/ GenBank. These EST databases of Antarctic green algae can be used in a wide range of studies on psychrophilic genes expressed by polar microorganisms.

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Year:  2012        PMID: 22580308     DOI: 10.4014/jmb.1201.01002

Source DB:  PubMed          Journal:  J Microbiol Biotechnol        ISSN: 1017-7825            Impact factor:   2.351


  2 in total

1.  Isolation and characterization of antifreeze proteins from the antarctic marine microalga Pyramimonas gelidicola.

Authors:  Woongsic Jung; Yunho Gwak; Peter L Davies; Hak Jun Kim; EonSeon Jin
Journal:  Mar Biotechnol (NY)       Date:  2014-03-08       Impact factor: 3.619

2.  Draft Genome Sequence of Pseudomonas pelagia CL-AP6, a Psychrotolerant Bacterium Isolated from Culture of Antarctic Green Alga Pyramimonas gelidicola.

Authors:  Hye Yeon Koh; Woongsic Jung; Hackwon Do; Sung Gu Lee; Jun Hyuck Lee; Hak Jun Kim
Journal:  Genome Announc       Date:  2013-09-05
  2 in total

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