Literature DB >> 22575655

Esre: a novel essential non-coding RNA in Escherichia coli.

Zhichao Chen1, Yi Wang, Yarong Li, Yue Li, Nan Fu, Jiang Ye, Huizhan Zhang.   

Abstract

YigP gene (GeneID: 948915) locates between ubiquinone biosynthetic genes ubiE and ubiB in Escherichia coli. GeneBank annotates yigP as a putative protein-coding gene. In this study, we found a new essential sRNA gene, esre, locates within the region of yigP. The E. coli strain with inactive esre must rely on a complementary plasmid to survive. Moreover, RACE experiments showed esre encodes an RNA molecule of 252 nt. Further experiments revealed esre gene is immune to frame shift mutations and the function of esre depends mostly on the RNA secondary structure, which are typical traits of sRNA. Since it is difficult to predict the target of an essential sRNA, more research is needed to reveal the function and mechanism of esre.
Copyright © 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22575655     DOI: 10.1016/j.febslet.2012.03.010

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  3 in total

1.  ubiJ, a new gene required for aerobic growth and proliferation in macrophage, is involved in coenzyme Q biosynthesis in Escherichia coli and Salmonella enterica serovar Typhimurium.

Authors:  Laurent Aussel; Laurent Loiseau; Mahmoud Hajj Chehade; Bérengère Pocachard; Marc Fontecave; Fabien Pierrel; Frédéric Barras
Journal:  J Bacteriol       Date:  2013-10-18       Impact factor: 3.490

2.  Chance and necessity in the genome evolution of endosymbiotic bacteria of insects.

Authors:  Beatriz Sabater-Muñoz; Christina Toft; David Alvarez-Ponce; Mario A Fares
Journal:  ISME J       Date:  2017-03-21       Impact factor: 10.302

3.  EsrE-A yigP Locus-Encoded Transcript-Is a 3' UTR sRNA Involved in the Respiratory Chain of E. coli.

Authors:  Hui Xia; Xichen Yang; Qiongwei Tang; Jiang Ye; Haizhen Wu; Huizhan Zhang
Journal:  Front Microbiol       Date:  2017-08-29       Impact factor: 5.640

  3 in total

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