| Literature DB >> 22574178 |
Berta Luzón-Toro1, Ana Torroglosa, Rocío Núñez-Torres, María Valle Enguix-Riego, Raquel María Fernández, Juan Carlos de Agustín, Guillermo Antiñolo, Salud Borrego.
Abstract
Hirschsprung disease (HSCR, OMIM 142623) is a developmental disorder characterized by the absence of ganglion cells along variable lengths of the distal gastrointestinal tract, which results in tonic contraction of the aganglionic gut segment and functional intestinal obstruction. The RET proto-oncogene is the major gene for HSCR with differential contributions of its rare and common, coding and noncoding mutations to the multifactorial nature of this pathology. Many other genes have been described to be associated with the pathology, as NRG1 gene (8p12), encoding neuregulin 1, which is implicated in the development of the enteric nervous system (ENS), and seems to contribute by both common and rare variants. Here we present the results of a comprehensive analysis of the NRG1 gene in the context of the disease in a series of 207 Spanish HSCR patients, by both mutational screening of its coding sequence and evaluation of 3 common tag SNPs as low penetrance susceptibility factors, finding some potentially damaging variants which we have functionally characterized. All of them were found to be associated with a significant reduction of the normal NRG1 protein levels. The fact that those mutations analyzed alter NRG1 protein would suggest that they would be related with HSCR disease not only in Chinese but also in a Caucasian population, which reinforces the implication of NRG1 gene in this pathology.Entities:
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Year: 2012 PMID: 22574178 PMCID: PMC3344894 DOI: 10.1371/journal.pone.0036524
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Allelic distribution and frequency of NRG1 genotyped variants.
| Variant | Allele | HSCR (%) | Controls (%) |
| rs16879552 C>T | C | 267 (99.6%) | 262 (97.8%) |
| T | 1 (0.4%) | 6 (2.2%) | |
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| rs7835688 C>G | C | 131 (48.8%) | 114 (42.5%) |
| G | 137 (51.2%) | 154 (57.5%) | |
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| rs10088313 G>T | G | 265 (98.9%) | 263 (98.1%) |
| T | 3 (1.1%) | 5 (1.9%) | |
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Allelic distribution and frequency of the NRG1 genotyped variants in HSCR patients and controls and their statistical comparison through γ 2.
Sequence variants detected in our cohort of HSCR patients.
| Nucleotide Change | Amino acid Change | Reference |
| c.332T>C | p.M111T | – |
| c.417G>A | p.M139I | – |
| c.1313G>A | p.R438H | – |
| c.-97 C>A | – | rs7834206 |
| c.-266 T>C | – | rs7820838 |
| c.101–56_68del | – | – |
| c.113G>A | p.R38Q | rs3924999 |
| c.229T>C | p.L77L | – |
| c.400+5 G>C | – | – |
| c.401−50C>G | – | – |
| c.414C>T | p.G138G | rs79277882 |
| c.502+31230G>C | – | rs35641374 |
| c.502+31212G>C | – | rs34822181 |
| c.691+553A>G | – | rs79916768 |
| c.796G>T | p.V266L | rs74942016 |
| c.881T>C | p.M294T | rs10503929 |
| c.819–26delA | – | rs67120632 |
| c.1648C>T | p.R550W | rs80127039 |
Compilation of all the sequence variants obtained through our genetic analyses.
Candidate variants detected in HSCR patients.
| Nucleotide change | Amino Acid change | In silico prediction | LS | Inheritance | Other |
| c.332T>C | p.M111T | Probably damaging | S-HSCR | Father |
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| S-HSCR | Father |
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| S-HSCR | Mother | – | |||
| c.417G>A | p.M139I | Benign | S-HSCR |
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| c.1313G>A | p.R438H | Probably damaging | S-HSCR | NA | – |
| S-HSCR | NA | – |
List of details of the candidate variants in NRG1 isoform ß1 to be mutations associated with HSCR phenotype analyzed.
NA: Not available.
LS = Length segment.
Other = Mutations in other genes.
Figure 1Mutant NRG1 proteins.
Scheme of the main regions of NRG1 isoform ß1 protein and the location of the three variants analyzed.
Figure 2Immunoblot analysis of NRG1 mutants.
Human NRG1 wildtype (WT) and mutants (M111T, M139I and R438H) were overexpressed in COS7 cell line. A) The intracellular levels of NRG1 wild-type and M111T, M139I and R438H mutants were detected with anti-neuregulin 1α/ß1/2 (F-20) antibody. All three mutants showed a significant lower protein expression. Alpha-tubulin was used as the loading control for normalization. B) The bar chart represents the quantitative data of the relative protein expression levels normalized with alpha-tubulin in three independent assays. (**p<0.005). C) The release of the extracellular domain in the medium was detected using anti-FLAG M2 antibody. The mutations did not affect the release of that domain of the NRG-1 protein. D) The bar chart represents the quantitative data of the relative protein expression levels normalized in three independent assays.
Figure 3Analysis of cellular localization of NRG1 mutants.
Human NRG1 wildtype (WT) and mutants (M111T, M139I and R438H) were overexpressed in COS7 cell line. Cellular localization of NRG1 wild-type and mutants were analyzed using immunostaining with anti-neuregulin 1α/ß1/2 (F-20) antibody. Immunosignal for the three mutants was different in comparison with WT. Patchier and perinuclear distribution was observed in the three mutants in comparison with the punctuate at cytoplasmic membrane distribution of the WT protein.