Literature DB >> 22572457

Membrane protein structure determination by electron crystallography.

Iban Ubarretxena-Belandia1, David L Stokes.   

Abstract

During the past year, electron crystallography of membrane proteins has provided structural insights into the mechanism of several different transporters and into their interactions with lipid molecules within the bilayer. From a technical perspective there have been important advances in high-throughput screening of crystallization trials and in automated imaging of membrane crystals with the electron microscope. There have also been key developments in software, and in molecular replacement and phase extension methods designed to facilitate the process of structure determination.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22572457      PMCID: PMC3423591          DOI: 10.1016/j.sbi.2012.04.003

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  48 in total

1.  Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.

Authors:  S Subramaniam; R Henderson
Journal:  Nature       Date:  2000-08-10       Impact factor: 49.962

2.  Three-dimensional model of purple membrane obtained by electron microscopy.

Authors:  R Henderson; P N Unwin
Journal:  Nature       Date:  1975-09-04       Impact factor: 49.962

3.  Automated molecular microscopy: the new Leginon system.

Authors:  Christian Suloway; James Pulokas; Denis Fellmann; Anchi Cheng; Francisco Guerra; Joel Quispe; Scott Stagg; Clinton S Potter; Bridget Carragher
Journal:  J Struct Biol       Date:  2005-07       Impact factor: 2.867

Review 4.  Structure of rhodopsin and the metarhodopsin I photointermediate.

Authors:  Gebhard F X Schertler
Journal:  Curr Opin Struct Biol       Date:  2005-08       Impact factor: 6.809

Review 5.  MRC image processing programs.

Authors:  R A Crowther; R Henderson; J M Smith
Journal:  J Struct Biol       Date:  1996 Jan-Feb       Impact factor: 2.867

6.  Electron-crystallographic refinement of the structure of bacteriorhodopsin.

Authors:  N Grigorieff; T A Ceska; K H Downing; J M Baldwin; R Henderson
Journal:  J Mol Biol       Date:  1996-06-14       Impact factor: 5.469

7.  Trehalose embedding technique for high-resolution electron crystallography: application to structural study on bacteriorhodopsin.

Authors:  T Hirai; K Murata; K Mitsuoka; Y Kimura; Y Fujiyoshi
Journal:  J Electron Microsc (Tokyo)       Date:  1999

8.  Electron crystallography reveals the structure of metarhodopsin I.

Authors:  Jonathan J Ruprecht; Thorsten Mielke; Reiner Vogel; Claudio Villa; Gebhard F X Schertler
Journal:  EMBO J       Date:  2004-08-26       Impact factor: 11.598

9.  Lipid bilayer thickness varies linearly with acyl chain length in fluid phosphatidylcholine vesicles.

Authors:  B A Lewis; D M Engelman
Journal:  J Mol Biol       Date:  1983-05-15       Impact factor: 5.469

10.  Conformational changes in the multidrug transporter EmrE associated with substrate binding.

Authors:  Christopher G Tate; Iban Ubarretxena-Belandia; Joyce M Baldwin
Journal:  J Mol Biol       Date:  2003-09-05       Impact factor: 5.469

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  5 in total

1.  Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy.

Authors:  Nicolas Coudray; Salvatore Valvo; Minghui Hu; Ralph Lasala; Changki Kim; Martin Vink; Ming Zhou; Davide Provasi; Marta Filizola; Juoehi Tao; Jia Fang; Pawel A Penczek; Iban Ubarretxena-Belandia; David L Stokes
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-22       Impact factor: 11.205

2.  Sparse and incomplete factorial matrices to screen membrane protein 2D crystallization.

Authors:  R Lasala; N Coudray; A Abdine; Z Zhang; M Lopez-Redondo; R Kirshenbaum; J Alexopoulos; Z Zolnai; D L Stokes; I Ubarretxena-Belandia
Journal:  J Struct Biol       Date:  2014-12-03       Impact factor: 2.867

Review 3.  Life at the border: adaptation of proteins to anisotropic membrane environment.

Authors:  Irina D Pogozheva; Henry I Mosberg; Andrei L Lomize
Journal:  Protein Sci       Date:  2014-07-02       Impact factor: 6.725

4.  Monolayer-to-thin-film transition in supramolecular assemblies: the role of topological protection.

Authors:  Zachary P L Laker; Alexander J Marsden; Oreste De Luca; Ada Della Pia; Luís M A Perdigão; Giovanni Costantini; Neil R Wilson
Journal:  Nanoscale       Date:  2017-08-24       Impact factor: 7.790

5.  Structure of an E. coli integral membrane sulfurtransferase and its structural transition upon SCN(-) binding defined by EPR-based hybrid method.

Authors:  Shenglong Ling; Wei Wang; Lu Yu; Junhui Peng; Xiaoying Cai; Ying Xiong; Zahra Hayati; Longhua Zhang; Zhiyong Zhang; Likai Song; Changlin Tian
Journal:  Sci Rep       Date:  2016-01-28       Impact factor: 4.379

  5 in total

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