Literature DB >> 22569643

The ins and outs of algal metal transport.

Crysten E Blaby-Haas1, Sabeeha S Merchant.   

Abstract

Metal transporters are a central component in the interaction of algae with their environment. They represent the first line of defense to cellular perturbations in metal concentration, and by analyzing algal metal transporter repertoires, we gain insight into a fundamental aspect of algal biology. The ability of individual algae to thrive in environments with unique geochemistry, compared to non-algal species commonly used as reference organisms for metal homeostasis, provides an opportunity to broaden our understanding of biological metal requirements, preferences and trafficking. Chlamydomonas reinhardtii is the best developed reference organism for the study of algal biology, especially with respect to metal metabolism; however, the diversity of algal niches necessitates a comparative genomic analysis of all sequenced algal genomes. A comparison between known and putative proteins in animals, plants, fungi and algae using protein similarity networks has revealed the presence of novel metal metabolism components in Chlamydomonas including new iron and copper transporters. This analysis also supports the concept that, in terms of metal metabolism, algae from similar niches are more related to one another than to algae from the same phylogenetic clade. This article is part of a Special Issue entitled: Cell Biology of Metals.
Copyright © 2012 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22569643      PMCID: PMC3408858          DOI: 10.1016/j.bbamcr.2012.04.010

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  205 in total

1.  Integration of biological networks and gene expression data using Cytoscape.

Authors:  Melissa S Cline; Michael Smoot; Ethan Cerami; Allan Kuchinsky; Nerius Landys; Chris Workman; Rowan Christmas; Iliana Avila-Campilo; Michael Creech; Benjamin Gross; Kristina Hanspers; Ruth Isserlin; Ryan Kelley; Sarah Killcoyne; Samad Lotia; Steven Maere; John Morris; Keiichiro Ono; Vuk Pavlovic; Alexander R Pico; Aditya Vailaya; Peng-Liang Wang; Annette Adler; Bruce R Conklin; Leroy Hood; Martin Kuiper; Chris Sander; Ilya Schmulevich; Benno Schwikowski; Guy J Warner; Trey Ideker; Gary D Bader
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

2.  Cloning and characterization of high-CO2-specific cDNAs from a marine microalga, Chlorococcum littorale, and effect of CO2 concentration and iron deficiency on the gene expression.

Authors:  T Sasaki; N Kurano; S Miyachi
Journal:  Plant Cell Physiol       Date:  1998-02       Impact factor: 4.927

3.  Divalent metal transport in the green microalga Chlamydomonas reinhardtii is mediated by a protein similar to prokaryotic Nramp homologues.

Authors:  Alexandra Rosakis; Wolfgang Köster
Journal:  Biometals       Date:  2005-02       Impact factor: 2.949

4.  Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.

Authors:  Christopher J Gobler; Dianna L Berry; Sonya T Dyhrman; Steven W Wilhelm; Asaf Salamov; Alexei V Lobanov; Yan Zhang; Jackie L Collier; Louie L Wurch; Adam B Kustka; Brian D Dill; Manesh Shah; Nathan C VerBerkmoes; Alan Kuo; Astrid Terry; Jasmyn Pangilinan; Erika A Lindquist; Susan Lucas; Ian T Paulsen; Theresa K Hattenrath-Lehmann; Stephanie C Talmage; Elyse A Walker; Florian Koch; Amanda M Burson; Maria Alejandra Marcoval; Ying-Zhong Tang; Gary R Lecleir; Kathryn J Coyne; Gry M Berg; Erin M Bertrand; Mak A Saito; Vadim N Gladyshev; Igor V Grigoriev
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-23       Impact factor: 11.205

5.  Proteolytic processing of CmPP36, a protein from the cytochrome b(5) reductase family, is required for entry into the phloem translocation pathway.

Authors:  B Xoconostle-Cázares; R Ruiz-Medrano; W J Lucas
Journal:  Plant J       Date:  2000-12       Impact factor: 6.417

6.  Iron-regulated DNA binding by the AFT1 protein controls the iron regulon in yeast.

Authors:  Y Yamaguchi-Iwai; R Stearman; A Dancis; R D Klausner
Journal:  EMBO J       Date:  1996-07-01       Impact factor: 11.598

Review 7.  Metal hyperaccumulation in plants.

Authors:  Ute Krämer
Journal:  Annu Rev Plant Biol       Date:  2010       Impact factor: 26.379

8.  Identification of the Escherichia coli K-12 Nramp orthologue (MntH) as a selective divalent metal ion transporter.

Authors:  H Makui; E Roig; S T Cole; J D Helmann; P Gros; M F Cellier
Journal:  Mol Microbiol       Date:  2000-03       Impact factor: 3.501

9.  FieF (YiiP) from Escherichia coli mediates decreased cellular accumulation of iron and relieves iron stress.

Authors:  Gregor Grass; Markus Otto; Beate Fricke; Christopher J Haney; Christopher Rensing; Dietrich H Nies; Doreen Munkelt
Journal:  Arch Microbiol       Date:  2004-11-11       Impact factor: 2.552

10.  Ongoing and future developments at the Universal Protein Resource.

Authors: 
Journal:  Nucleic Acids Res       Date:  2010-11-04       Impact factor: 16.971

View more
  45 in total

Review 1.  Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation.

Authors:  Sabeeha S Merchant; John D Helmann
Journal:  Adv Microb Physiol       Date:  2012       Impact factor: 3.517

2.  Copper economy in Chlamydomonas: prioritized allocation and reallocation of copper to respiration vs. photosynthesis.

Authors:  Janette Kropat; Sean D Gallaher; Eugen I Urzica; Stacie S Nakamoto; Daniela Strenkert; Stephen Tottey; Andrew Z Mason; Sabeeha S Merchant
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

3.  Transcriptional response to copper excess and identification of genes involved in heavy metal tolerance in the extremophilic microalga Chlamydomonas acidophila.

Authors:  Sanna Olsson; Fernando Puente-Sánchez; Manuel J Gómez; Angeles Aguilera
Journal:  Extremophiles       Date:  2015-04-05       Impact factor: 2.395

4.  Zinc deficiency impacts CO2 assimilation and disrupts copper homeostasis in Chlamydomonas reinhardtii.

Authors:  Davin Malasarn; Janette Kropat; Scott I Hsieh; Giovanni Finazzi; David Casero; Joseph A Loo; Matteo Pellegrini; Francis-André Wollman; Sabeeha S Merchant
Journal:  J Biol Chem       Date:  2013-02-25       Impact factor: 5.157

5.  Identification of Coq11, a new coenzyme Q biosynthetic protein in the CoQ-synthome in Saccharomyces cerevisiae.

Authors:  Christopher M Allan; Agape M Awad; Jarrett S Johnson; Dyna I Shirasaki; Charles Wang; Crysten E Blaby-Haas; Sabeeha S Merchant; Joseph A Loo; Catherine F Clarke
Journal:  J Biol Chem       Date:  2015-01-28       Impact factor: 5.157

6.  Early eukaryotic origins for cilia-associated bioactive peptide-amidating activity.

Authors:  Dhivya Kumar; Crysten E Blaby-Haas; Sabeeha S Merchant; Richard E Mains; Stephen M King; Betty A Eipper
Journal:  J Cell Sci       Date:  2016-01-19       Impact factor: 5.285

7.  Fe sparing and Fe recycling contribute to increased superoxide dismutase capacity in iron-starved Chlamydomonas reinhardtii.

Authors:  M Dudley Page; Michael D Allen; Janette Kropat; Eugen I Urzica; Steven J Karpowicz; Scott I Hsieh; Joseph A Loo; Sabeeha S Merchant
Journal:  Plant Cell       Date:  2012-06-08       Impact factor: 11.277

8.  The path to triacylglyceride obesity in the sta6 strain of Chlamydomonas reinhardtii.

Authors:  Ursula Goodenough; Ian Blaby; David Casero; Sean D Gallaher; Carrie Goodson; Shannon Johnson; Jae-Hyeok Lee; Sabeeha S Merchant; Matteo Pellegrini; Robyn Roth; Jannette Rusch; Manmilan Singh; James G Umen; Taylor L Weiss; Tuya Wulan
Journal:  Eukaryot Cell       Date:  2014-02-28

9.  Identification of Two Conserved Residues Involved in Copper Release from Chloroplast PIB-1-ATPases.

Authors:  Emeline Sautron; Cécile Giustini; ThuyVan Dang; Lucas Moyet; Daniel Salvi; Serge Crouzy; Norbert Rolland; Patrice Catty; Daphné Seigneurin-Berny
Journal:  J Biol Chem       Date:  2016-08-04       Impact factor: 5.157

10.  Systems and trans-system level analysis identifies conserved iron deficiency responses in the plant lineage.

Authors:  Eugen I Urzica; David Casero; Hiroaki Yamasaki; Scott I Hsieh; Lital N Adler; Steven J Karpowicz; Crysten E Blaby-Haas; Steven G Clarke; Joseph A Loo; Matteo Pellegrini; Sabeeha S Merchant
Journal:  Plant Cell       Date:  2012-10-05       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.