Literature DB >> 22569255

Atomic resolution of the crystal structure of the hyperthermophilic family 12 endocellulase and stabilizing role of the DxDxDG calcium-binding motif in Pyrococcus furiosus.

Han-Woo Kim1, Misumi Kataoka, Kazuhiko Ishikawa.   

Abstract

Hyperthermophilic glycoside hydrolase family 12 endocellulase (EGPf) from the archaeon Pyrococcus furiosus catalyzes the hydrolytic cleavage of β-1,4-glucosidic linkage in β-glucan cellulose. A truncated EGPf (EGPfΔN30) mutant lacking the proline and hydroxyl-residue rich region at the N terminus was constructed, and its crystal structure was resolved at an atomic resolution of 1.07 Å. Our results indicate that the structure of EGPf, which consists of a β-jelly roll, exhibits structural similarity with the endocellulase of Thermotoga maritima. Additionally, we further determined that the thermostability of EGPf is maintained in part by the binding of Ca²⁺ in a DxDxDG Ca²⁺-binding motif, atypical of most archaeal proteins.
Copyright © 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22569255     DOI: 10.1016/j.febslet.2012.02.029

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  10 in total

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Authors:  Neal N Hengge; Sam J B Mallinson; Patthra Pason; Vladimir V Lunin; Markus Alahuhta; Daehwan Chung; Michael E Himmel; Janet Westpheling; Yannick J Bomble
Journal:  Int J Mol Sci       Date:  2022-05-28       Impact factor: 6.208

2.  Functional Screening of Hydrolytic Activities Reveals an Extremely Thermostable Cellulase from a Deep-Sea Archaeon.

Authors:  Benedikt Leis; Simon Heinze; Angel Angelov; Vu Thuy Trang Pham; Andrea Thürmer; Mohamed Jebbar; Peter N Golyshin; Wolfgang R Streit; Rolf Daniel; Wolfgang Liebl
Journal:  Front Bioeng Biotechnol       Date:  2015-07-01

3.  Heterologous expression of hyperthermophilic cellulases of archaea Pyrococcus sp. by fungus Talaromyces cellulolyticus.

Authors:  Seiichiro Kishishita; Tatsuya Fujii; Kazuhiko Ishikawa
Journal:  J Ind Microbiol Biotechnol       Date:  2014-11-12       Impact factor: 3.346

4.  Three glycoside hydrolase family 12 enzymes display diversity in substrate specificities and synergistic action between each other.

Authors:  Zhu Zhu; Jingyao Qu; Lele Yu; Xukai Jiang; Guodong Liu; Lushan Wang; Yinbo Qu; Yuqi Qin
Journal:  Mol Biol Rep       Date:  2019-07-29       Impact factor: 2.316

5.  Recombinant expression library of Pyrococcus furiosus constructed by high-throughput cloning: a useful tool for functional and structural genomics.

Authors:  Hui Yuan; Li Peng; Zhong Han; Juan-Juan Xie; Xi-Peng Liu
Journal:  Front Microbiol       Date:  2015-09-11       Impact factor: 5.640

6.  Secondary structure preferences of mn (2+) binding sites in bacterial proteins.

Authors:  Tatyana Aleksandrovna Khrustaleva
Journal:  Adv Bioinformatics       Date:  2014-03-17

7.  A new crystal form of a hyperthermophilic endocellulase.

Authors:  Misumi Kataoka; Kazuhiko Ishikawa
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-06-18       Impact factor: 1.056

8.  Isolation and Characterization of the First Xylanolytic Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1 and Its Unusual Multidomain Glycosidase.

Authors:  Sergey N Gavrilov; Christina Stracke; Kenneth Jensen; Peter Menzel; Verena Kallnik; Alexei Slesarev; Tatyana Sokolova; Kseniya Zayulina; Christopher Bräsen; Elizaveta A Bonch-Osmolovskaya; Xu Peng; Ilya V Kublanov; Bettina Siebers
Journal:  Front Microbiol       Date:  2016-05-03       Impact factor: 5.640

9.  Structural Insight of a Trimodular Halophilic Cellulase with a Family 46 Carbohydrate-Binding Module.

Authors:  Huaidong Zhang; Guimin Zhang; Chaoxiang Yao; Muhammad Junaid; Zhenghui Lu; Houjin Zhang; Yanhe Ma
Journal:  PLoS One       Date:  2015-11-12       Impact factor: 3.240

10.  Cloning, Expression, and Characterization of a Thermophilic Endoglucanase, AcCel12B from Acidothermus cellulolyticus 11B.

Authors:  Junling Wang; Gui Gao; Yuwei Li; Liangzhen Yang; Yanli Liang; Hanyong Jin; Weiwei Han; Yan Feng; Zuoming Zhang
Journal:  Int J Mol Sci       Date:  2015-10-22       Impact factor: 5.923

  10 in total

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