Literature DB >> 22565834

Composite interval mapping and multiple interval mapping: procedures and guidelines for using Windows QTL Cartographer.

Luciano Da Costa E Silva1, Shengchu Wang, Zhao-Bang Zeng.   

Abstract

Tremendous progress has been made in recent years on developing statistical methods for mapping quantitative trait loci (QTL) from crosses of inbred lines. In this chapter, we provide an introduction of composite interval mapping and multiple interval mapping methods for mapping QTL from inbred line crosses and also detailed instructions to perform the analyses in Windows QTL Cartographer. For each method, we discuss the meaning of each option in the analysis procedures and how to understand and interpret the mapping results through a work-out example.

Mesh：

Year:  2012        PMID： 22565834     DOI： 10.1007/978-1-61779-785-9_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  44 in total

1.  Multi-location wheat stripe rust QTL analysis: genetic background and epistatic interactions.

Authors:  M Dolores Vazquez; Robert Zemetra; C James Peterson; Xianming M Chen; Adam Heesacker; Christopher C Mundt
Journal:  Theor Appl Genet       Date:  2015-04-07       Impact factor: 5.699

2.  Combined QTL mapping, physiological and transcriptomic analyses to identify candidate genes involved in Brassica napus seed aging.

Authors:  Tengyue Wang; Lintao Hou; Hongju Jian; Feifei Di; Jiana Li; Liezhao Liu
Journal:  Mol Genet Genomics       Date:  2018-07-04       Impact factor: 3.291

3.  A Large Transposon Insertion in the stiff1 Promoter Increases Stalk Strength in Maize.

Authors:  Zhihai Zhang; Xuan Zhang; Zhelong Lin; Jian Wang; Hangqin Liu; Leina Zhou; Shuyang Zhong; Yan Li; Can Zhu; Jinsheng Lai; Xianran Li; Jianming Yu; Zhongwei Lin
Journal:  Plant Cell       Date:  2019-11-04       Impact factor: 11.277

4.  Mapping resistance to the bird cherry-oat aphid and the greenbug in wheat using sequence-based genotyping.

Authors:  L A Crespo-Herrera; E Akhunov; L Garkava-Gustavsson; K W Jordan; C M Smith; R P Singh; I Ahman
Journal:  Theor Appl Genet       Date:  2014-08-12       Impact factor: 5.699

5.  Identification of Cephalosporium stripe resistance quantitative trait loci in two recombinant inbred line populations of winter wheat.

Authors:  M Dolores Vazquez; Robert Zemetra; C James Peterson; Christopher C Mundt
Journal:  Theor Appl Genet       Date:  2014-11-29       Impact factor: 5.699

6.  The Genetics of Leaf Flecking in Maize and Its Relationship to Plant Defense and Disease Resistance.

Authors:  Bode A Olukolu; Yang Bian; Brian De Vries; William F Tracy; Randall J Wisser; James B Holland; Peter J Balint-Kurti
Journal:  Plant Physiol       Date:  2016-09-26       Impact factor: 8.340

7.  Gene duplication confers enhanced expression of 27-kDa γ-zein for endosperm modification in quality protein maize.

Authors:  Hongjun Liu; Junpeng Shi; Chuanlong Sun; Hao Gong; Xingming Fan; Fazhan Qiu; Xuehui Huang; Qi Feng; Xixi Zheng; Ningning Yuan; Changsheng Li; Zhiyong Zhang; Yiting Deng; Jiechen Wang; Guangtang Pan; Bin Han; Jinsheng Lai; Yongrui Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

8.  Use of near-isogenic lines to precisely map and validate a major QTL for grain weight on chromosome 4AL in bread wheat (Triticum aestivum L.).

Authors:  Panfeng Guan; Na Di; Qing Mu; Xueyi Shen; Yongfa Wang; Xiaobo Wang; Kuohai Yu; Wanjun Song; Yongming Chen; Mingming Xin; Zhaorong Hu; Weilong Guo; Yingyin Yao; Zhongfu Ni; Qixin Sun; Huiru Peng
Journal:  Theor Appl Genet       Date:  2019-05-22       Impact factor: 5.699

9.  QTL mapping of pre-harvest sprouting resistance in a white wheat cultivar Danby.

Authors:  Mingqin Shao; Guihua Bai; Trevor W Rife; Jesse Poland; Meng Lin; Shubing Liu; Hui Chen; Tadele Kumssa; Allan Fritz; Harold Trick; Yan Li; Guorong Zhang
Journal:  Theor Appl Genet       Date:  2018-06-02       Impact factor: 5.699

10.  Fine mapping of a quantitative resistance gene for gray leaf spot of maize (Zea mays L.) derived from teosinte (Z. mays ssp. parviglumis).

Authors:  Xinye Zhang; Qin Yang; Elizabeth Rucker; Wade Thomason; Peter Balint-Kurti
Journal:  Theor Appl Genet       Date:  2017-03-24       Impact factor: 5.699
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.