Literature DB >> 22565340

Phylogenetic analysis and expression patterns of p16 and p19 in Paracentrotus lividus embryos.

Caterina Costa1, Konstantinos Karakostis, Francesca Zito, Valeria Matranga.   

Abstract

P16 and P19 are two small acidic proteins involved in the formation of the biomineralized skeleton of sea urchin embryos and adults. Here, we describe the cloning and the embryonic temporal and spatial expression profiles of p16 and p19 mRNAs, identified for the first time in Paracentrotus lividus. Phylogenetic analysis showed a high degree of similarity of the deduced Pl-P16 and Pl-P19 sequences with the Lytechinus variegatus and Strongylocentrotus purpuratus orthologs. While only a reduced similarity with other phyla, including mammals, was detected, their implication in biomineralized tissues calls for their conservation in evolution. By comparative quantitative PCR and in situ hybridization, we found that Pl-p16 and Pl-p19 expression was restricted to skeletogenic cells throughout embryogenesis, with transcript levels peaking at the late gastrula stage. Dissimilar Pl-p16 and Pl-p19 spatial expression within the primary mesenchyme cell syncytium at the gastrula and pluteus stages suggests the occurrence of a different regulation of gene transcription.

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Year:  2012        PMID: 22565340     DOI: 10.1007/s00427-012-0405-9

Source DB:  PubMed          Journal:  Dev Genes Evol        ISSN: 0949-944X            Impact factor:   0.900


  24 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  The dynamics and regulation of mesenchymal cell fusion in the sea urchin embryo.

Authors:  P G Hodor; C A Ettensohn
Journal:  Dev Biol       Date:  1998-07-01       Impact factor: 3.582

Review 3.  Dentin sialophosphoprotein in biomineralization.

Authors:  Monica Prasad; William T Butler; Chunlin Qin
Journal:  Connect Tissue Res       Date:  2010-10       Impact factor: 3.417

4.  Interactions between acidic proteins and crystals: stereochemical requirements in biomineralization.

Authors:  L Addadi; S Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

5.  Maternal and embryonic provenance of a sea urchin embryo transcription factor, SpZ12-1.

Authors:  D G Wang; R J Britten; E H Davidson
Journal:  Mol Mar Biol Biotechnol       Date:  1995-06

6.  Different forms of DMP1 play distinct roles in mineralization.

Authors:  A Gericke; C Qin; Y Sun; R Redfern; D Redfern; Y Fujimoto; H Taleb; W T Butler; A L Boskey
Journal:  J Dent Res       Date:  2010-03-03       Impact factor: 6.116

7.  CaCO3 biomineralization: acidic 8-kDa proteins isolated from aragonitic abalone shell nacre can specifically modify calcite crystal morphology.

Authors:  Germaine Fu; Suresh Valiyaveettil; Brigitte Wopenka; Daniel E Morse
Journal:  Biomacromolecules       Date:  2005 May-Jun       Impact factor: 6.988

8.  Phylogenetic analysis and homology modelling of Paracentrotus lividus nectin.

Authors:  Caterina Costa; Carmela Cavalcante; Francesca Zito; Yukio Yokota; Valeria Matranga
Journal:  Mol Divers       Date:  2009-11-12       Impact factor: 2.943

9.  Echinoderm phosphorylated matrix proteins UTMP16 and UTMP19 have different functions in sea urchin tooth mineralization.

Authors:  Keith Alvares; Saryu N Dixit; Elizabeth Lux; Arthur Veis
Journal:  J Biol Chem       Date:  2009-07-13       Impact factor: 5.157

10.  Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix.

Authors:  Karlheinz Mann; Fred H Wilt; Albert J Poustka
Journal:  Proteome Sci       Date:  2010-06-17       Impact factor: 2.480

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  17 in total

Review 1.  Mechanisms of the epithelial-to-mesenchymal transition in sea urchin embryos.

Authors:  Hideki Katow
Journal:  Tissue Barriers       Date:  2015-06-17

2.  Characterization of an Alpha Type Carbonic Anhydrase from Paracentrotus lividus Sea Urchin Embryos.

Authors:  Konstantinos Karakostis; Caterina Costa; Francesca Zito; Franz Brümmer; Valeria Matranga
Journal:  Mar Biotechnol (NY)       Date:  2016-05-26       Impact factor: 3.619

3.  MITF: an evolutionarily conserved transcription factor in the sea urchin Paracentrotus lividus.

Authors:  Roberta Russo; Marco Chiaramonte; Nadia Lampiasi; Francesca Zito
Journal:  Genetica       Date:  2019-10-17       Impact factor: 1.082

4.  Maternal Exposure to Cadmium and Manganese Impairs Reproduction and Progeny Fitness in the Sea Urchin Paracentrotus lividus.

Authors:  Oriana Migliaccio; Immacolata Castellano; Paola Cirino; Giovanna Romano; Anna Palumbo
Journal:  PLoS One       Date:  2015-06-30       Impact factor: 3.240

5.  Molecular response to toxic diatom-derived aldehydes in the sea urchin Paracentrotus lividus.

Authors:  Stefano Varrella; Giovanna Romano; Adrianna Ianora; Matt G Bentley; Nadia Ruocco; Maria Costantini
Journal:  Mar Drugs       Date:  2014-04-04       Impact factor: 5.118

6.  First Morphological and Molecular Evidence of the Negative Impact of Diatom-Derived Hydroxyacids on the Sea Urchin Paracentrotus lividus.

Authors:  Stefano Varrella; Giovanna Romano; Nadia Ruocco; Adrianna Ianora; Matt G Bentley; Maria Costantini
Journal:  Toxicol Sci       Date:  2016-03-16       Impact factor: 4.849

7.  Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks.

Authors:  David Viktor Dylus; Anna Czarkwiani; Josefine Stångberg; Olga Ortega-Martinez; Sam Dupont; Paola Oliveri
Journal:  Evodevo       Date:  2016-01-11       Impact factor: 2.250

8.  Titanium dioxide nanoparticles stimulate sea urchin immune cell phagocytic activity involving TLR/p38 MAPK-mediated signalling pathway.

Authors:  Annalisa Pinsino; Roberta Russo; Rosa Bonaventura; Andrea Brunelli; Antonio Marcomini; Valeria Matranga
Journal:  Sci Rep       Date:  2015-09-28       Impact factor: 4.379

9.  Heterologous expression of newly identified galectin-8 from sea urchin embryos produces recombinant protein with lactose binding specificity and anti-adhesive activity.

Authors:  Konstantinos Karakostis; Kostantinos Karakostis; Caterina Costa; Francesca Zito; Valeria Matranga
Journal:  Sci Rep       Date:  2015-12-07       Impact factor: 4.379

10.  Subtle reproductive impairment through nitric oxide-mediated mechanisms in sea urchins from an area affected by harmful algal blooms.

Authors:  Oriana Migliaccio; Immacolata Castellano; Davide Di Cioccio; Gabriella Tedeschi; Armando Negri; Paola Cirino; Giovanna Romano; Adriana Zingone; Anna Palumbo
Journal:  Sci Rep       Date:  2016-05-19       Impact factor: 4.379

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