Literature DB >> 22564717

Towards an integrated venomics approach for accelerated conopeptide discovery.

Jutty Rajan Prashanth1, Richard J Lewis, Sébastien Dutertre.   

Abstract

Conopeptides and conotoxins are small peptides produced by cone snails as a part of their predatory/defense strategies that target key ion channels and receptors in the nervous system. Some of these peptides also potently target mammalian ion channels involved in pain pathways. As a result, these venoms are a source of valuable pharmacological and therapeutic agents. The traditional approach towards conopeptide discovery relied on activity-guided fractionation, which is time consuming and resource-intensive. In this review, we discuss the advances in the fields of transcriptomics, proteomics and bioinformatics that now allow researchers to integrate these three platforms towards a more efficient discovery strategy. In this review, we also highlight the challenges associated with the wealth of data generated with this integrated approach and briefly discuss the impact these methods could have on the field of toxinology.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22564717     DOI: 10.1016/j.toxicon.2012.04.340

Source DB:  PubMed          Journal:  Toxicon        ISSN: 0041-0101            Impact factor:   3.033


  25 in total

Review 1.  Hormone-like conopeptides - new tools for pharmaceutical design.

Authors:  Ashlin Turner; Quentin Kaas; David J Craik
Journal:  RSC Med Chem       Date:  2020-09-24

2.  Combined transcriptomic and proteomic analysis reveals a diversity of venom-related and toxin-like peptides expressed in the mat anemone Zoanthus natalensis (Cnidaria, Hexacorallia).

Authors:  Qiwen Liao; Guiyi Gong; Terence C W Poon; Irene L Ang; Kate M K Lei; Shirley Weng In Siu; Clarence Tsun Ting Wong; Gandhi Rádis-Baptista; Simon Ming-Yuen Lee
Journal:  Arch Toxicol       Date:  2019-06-15       Impact factor: 5.153

Review 3.  Structure and function of μ-conotoxins, peptide-based sodium channel blockers with analgesic activity.

Authors:  Brad R Green; Grzegorz Bulaj; Raymond S Norton
Journal:  Future Med Chem       Date:  2014-10       Impact factor: 3.808

4.  Deep venomics reveals the mechanism for expanded peptide diversity in cone snail venom.

Authors:  Sébastien Dutertre; Ai-hua Jin; Quentin Kaas; Alun Jones; Paul F Alewood; Richard J Lewis
Journal:  Mol Cell Proteomics       Date:  2012-11-14       Impact factor: 5.911

Review 5.  Bioinformatics-Aided Venomics.

Authors:  Quentin Kaas; David J Craik
Journal:  Toxins (Basel)       Date:  2015-06-11       Impact factor: 4.546

Review 6.  Natural compounds interacting with nicotinic acetylcholine receptors: from low-molecular weight ones to peptides and proteins.

Authors:  Denis Kudryavtsev; Irina Shelukhina; Catherine Vulfius; Tatyana Makarieva; Valentin Stonik; Maxim Zhmak; Igor Ivanov; Igor Kasheverov; Yuri Utkin; Victor Tsetlin
Journal:  Toxins (Basel)       Date:  2015-05-14       Impact factor: 4.546

7.  Sample limited characterization of a novel disulfide-rich venom peptide toxin from terebrid marine snail Terebra variegata.

Authors:  Prachi Anand; Alexandre Grigoryan; Mohammed H Bhuiyan; Beatrix Ueberheide; Victoria Russell; Jose Quinoñez; Patrick Moy; Brian T Chait; Sébastien F Poget; Mandë Holford
Journal:  PLoS One       Date:  2014-04-08       Impact factor: 3.240

8.  Easy and rapid binding assay for functional analysis of disulfide-containing peptides by a pull-down method using a puromycin-linker and a cell-free translation system.

Authors:  Yutaro Tanemura; Yuki Mochizuki; Shigefumi Kumachi; Naoto Nemoto
Journal:  Biology (Basel)       Date:  2015-03-02

9.  Prediction of Toxin Genes from Chinese Yellow Catfish Based on Transcriptomic and Proteomic Sequencing.

Authors:  Bing Xie; Xiaofeng Li; Zhilong Lin; Zhiqiang Ruan; Min Wang; Jie Liu; Ting Tong; Jia Li; Yu Huang; Bo Wen; Ying Sun; Qiong Shi
Journal:  Int J Mol Sci       Date:  2016-04-13       Impact factor: 5.923

Review 10.  Glycosylation of conotoxins.

Authors:  Gerrit J Gerwig; Henry G Hocking; Reto Stöcklin; Johannis P Kamerling; Rolf Boelens
Journal:  Mar Drugs       Date:  2013-03-01       Impact factor: 5.118

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