Literature DB >> 22561985

HPV 9G DNAChip: Based on the 9G DNAChip technology.

Keum-Soo Song1, Satish Balasaheb Nimse, Heejung An, Junghoon Kim, Van-Thuan Nguyen, Van-Thao Ta, Taisun Kim.   

Abstract

The novel HPV 9G DNAChips were developed for the detection and discrimination of the HPV genotypes in the clinical samples. The HPV 9G DNAChip established high SBR of 50-70 and 100% target-specific hybridization after 30min hybridization and 2×2min washing at 25°C. We compared the genotyping results of the 959 HPV positive and 82 HPV negative clinical samples by the HPV 9G DNAChip and the sequencing; the results are in 100% agreement. The HPV 9G DNAChip efficiently discriminate 19 HPV genotypes in the 959 HPV positive clinical samples. The results of HPV 9G DNAChip were 100% identical with the sequencing analysis in the detection and discrimination of HPV genotypes in the HPV negative clinical samples. The high SBR, 100% target-specific hybridization, and 25°C hybridization and washing makes the HPV 9G DNAChip a promising diagnostic tool for the accurate HPV genotyping.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22561985     DOI: 10.1016/j.jviromet.2012.04.003

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  6 in total

Review 1.  Immobilization techniques for microarray: challenges and applications.

Authors:  Satish Balasaheb Nimse; Keumsoo Song; Mukesh Digambar Sonawane; Danishmalik Rafiq Sayyed; Taisun Kim
Journal:  Sensors (Basel)       Date:  2014-11-25       Impact factor: 3.576

2.  HPV genotyping 9G membrane test: a point-of-care diagnostic platform.

Authors:  Keumsoo Song; Satish Balasaheb Nimse; Heejung An; Taisun Kim
Journal:  Sensors (Basel)       Date:  2014-10-15       Impact factor: 3.576

3.  Comparison of the Cobas 4800 HPV and HPV 9G DNA Chip Tests for Detection of High-Risk Human Papillomavirus in Cervical Specimens of Women with Consecutive Positive HPV Tests But Negative Pap Smears.

Authors:  Sun-Young Jun; Eun Su Park; Jiyoung Kim; Jun Kang; Jae Jun Lee; Yoonjin Bae; Sang-Il Kim; Lee-So Maeng
Journal:  PLoS One       Date:  2015-10-15       Impact factor: 3.240

4.  9G DNAChip Technology: Self-Assembled Monolayer (SAM) of ssDNA for Ultra-Sensitive Detection of Biomarkers.

Authors:  Satish Balasaheb Nimse; Keum-Soo Song; Junghoon Kim; Danishmalik Rafiq Sayyed; Taisun Kim
Journal:  Int J Mol Sci       Date:  2013-03-12       Impact factor: 5.923

5.  HPV genotyping 9G membrane test.

Authors:  Danishmalik Rafiq Sayyed; Keum-Soo Song; Satish Balasaheb Nimse; Heejung An; Junghoon Kim; Taisun Kim
Journal:  Viruses       Date:  2013-11-22       Impact factor: 5.048

6.  Analytic performance of PANArray HPV and HPV 9G DNA chip tests for genotyping of high-risk human papillomavirus in cervical ThinPrep PreservCyt samples.

Authors:  Jiyoung Kim; Sun-Young Jun
Journal:  PLoS One       Date:  2019-10-31       Impact factor: 3.240

  6 in total

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