Literature DB >> 22559263

Beyond homeostasis: a predictive-dynamic framework for understanding cellular behavior.

Peter L Freddolino1, Saeed Tavazoie.   

Abstract

Microbial regulatory strategies have long been understood in terms of the homeostatic framework, in which a response is interpreted as a restoring force counteracting the immediate intracellular consequences of a change in the environment. In this review, we summarize the breadth of recent discoveries of cellular behavior extending beyond the homeostatic framework. We argue that the nonrandom structure of native habitats makes environmental fluctuations inherently multidimensional. Beyond its utility for accurate perception of immediate events, the temporal regularity of this multidimensional correlation structure allows microbes to make predictions about the trajectory of their sensory environment. We describe recently discovered examples of such predictive behavior, their physiological benefits, and the underlying evolutionary forces shaping them. These observations compel us to go beyond homeostasis and consider a predictive-dynamic framework in which cellular behavior is orchestrated in response to the meaning of an environmental perturbation, not only its direct and immediate fitness consequences.

Mesh:

Year:  2012        PMID: 22559263     DOI: 10.1146/annurev-cellbio-092910-154129

Source DB:  PubMed          Journal:  Annu Rev Cell Dev Biol        ISSN: 1081-0706            Impact factor:   13.827


  19 in total

1.  Near-real-time analysis of the phenotypic responses of Escherichia coli to 1-butanol exposure using Raman Spectroscopy.

Authors:  Theresah N K Zu; Ahmad I M Athamneh; Robert S Wallace; Eva Collakova; Ryan S Senger
Journal:  J Bacteriol       Date:  2014-08-25       Impact factor: 3.490

2.  The theory of constructed emotion: an active inference account of interoception and categorization.

Authors:  Lisa Feldman Barrett
Journal:  Soc Cogn Affect Neurosci       Date:  2017-01-01       Impact factor: 3.436

3.  Distinct heterochromatin-like domains promote transcriptional memory and silence parasitic genetic elements in bacteria.

Authors:  Haley M Amemiya; Thomas J Goss; Taylor M Nye; Rebecca L Hurto; Lyle A Simmons; Peter L Freddolino
Journal:  EMBO J       Date:  2021-12-28       Impact factor: 11.598

4.  Escherichia coli YigI is a Conserved Gammaproteobacterial Acyl-CoA Thioesterase Permitting Metabolism of Unusual Fatty Acid Substrates.

Authors:  Michael Schmidt; Theresa Proctor; Rucheng Diao; Peter L Freddolino
Journal:  J Bacteriol       Date:  2022-07-25       Impact factor: 3.476

5.  The power of predictions: An emerging paradigm for psychological research.

Authors:  J Benjamin Hutchinson; Lisa Feldman Barrett
Journal:  Curr Dir Psychol Sci       Date:  2019-04-16

6.  Cognition, Information Fields and Hologenomic Entanglement: Evolution in Light and Shadow.

Authors:  William B Miller
Journal:  Biology (Basel)       Date:  2016-05-21

Review 7.  The cognitive cell: bacterial behavior reconsidered.

Authors:  Pamela Lyon
Journal:  Front Microbiol       Date:  2015-04-14       Impact factor: 5.640

8.  Bacterial adaptation through loss of function.

Authors:  Alison K Hottes; Peter L Freddolino; Anupama Khare; Zachary N Donnell; Julia C Liu; Saeed Tavazoie
Journal:  PLoS Genet       Date:  2013-07-11       Impact factor: 5.917

9.  Balanced trade-offs between alternative strategies shape the response of C. elegans reproduction to chronic heat stress.

Authors:  Erin Z Aprison; Ilya Ruvinsky
Journal:  PLoS One       Date:  2014-08-28       Impact factor: 3.240

Review 10.  On Having No Head: Cognition throughout Biological Systems.

Authors:  František Baluška; Michael Levin
Journal:  Front Psychol       Date:  2016-06-21
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