Literature DB >> 22559214

Conceptual approaches for lncRNA drug discovery and future strategies.

Deeksha Bhartiya1, Shruti Kapoor, Saakshi Jalali, Satish Sati, Kriti Kaushik, Chetana Sachidanandan, Sridhar Sivasubbu, Vinod Scaria.   

Abstract

INTRODUCTION: Long non-coding RNAs (lncRNAs) are a recently discovered class of non-coding functional RNA which has attracted immense research interest. The growing corpus of literature in the field provides ample evidence to suggest the important role of lncRNAs as regulators in a wide spectrum of biological processes. Recent evidence also suggests the role of lncRNAs in the pathophysiology of disease processes. AREAS COVERED: The authors discuss a conceptual framework for understanding lncRNA-mediated regulation as a function of its interaction with other biomolecules in the cell. They summarize the mechanisms of the known functions of lncRNAs in light of this conceptual framework, and suggest how this insight could help in discovering novel targets for drug discovery. They also argue how certain emerging technologies could be of immense utility, both in discovering potential therapeutic targets as well as in further therapeutic development. EXPERT OPINION: The authors propose how the field could immensely benefit from methodologies and technologies from six emerging fields in molecular and computational biology. They also suggest a futuristic area of lncRNAs design as a potential offshoot of synthetic biology, which would be an attractive field, both for discovery of targets as well as a therapeutic strategy.

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Year:  2012        PMID: 22559214     DOI: 10.1517/17460441.2012.682055

Source DB:  PubMed          Journal:  Expert Opin Drug Discov        ISSN: 1746-0441            Impact factor:   6.098


  24 in total

1.  Distinct patterns of epigenetic marks and transcription factor binding sites across promoters of sense-intronic long noncoding RNAs.

Authors:  Sourav Ghosh; Satish Sati; Shantanu Sengupta; Vinod Scaria
Journal:  J Genet       Date:  2015-03       Impact factor: 1.166

Review 2.  Primer in Genetics and Genomics, Article 2-Advancing Nursing Research With Genomic Approaches.

Authors:  Hyunhwa Lee; Jessica Gill; Taura Barr; Sijung Yun; Hyungsuk Kim
Journal:  Biol Res Nurs       Date:  2017-01-30       Impact factor: 2.522

Review 3.  Short stories on zebrafish long noncoding RNAs.

Authors:  Shadabul Haque; Kriti Kaushik; Vincent Elvin Leonard; Shruti Kapoor; Ambily Sivadas; Adita Joshi; Vinod Scaria; Sridhar Sivasubbu
Journal:  Zebrafish       Date:  2014-12       Impact factor: 1.985

4.  Identification and Functional Prediction of Large Intergenic Noncoding RNAs (lincRNAs) in Rainbow Trout (Oncorhynchus mykiss).

Authors:  Jian Wang; Liyuan Fu; Prasanthi P Koganti; Lei Wang; Jacqelyn M Hand; Hao Ma; Jianbo Yao
Journal:  Mar Biotechnol (NY)       Date:  2016-02-11       Impact factor: 3.619

Review 5.  MALAT1 lncRNA and Parkinson's Disease: The role in the Pathophysiology and Significance for Diagnostic and Therapeutic Approaches.

Authors:  M Abrishamdar; M S Jalali; M Rashno
Journal:  Mol Neurobiol       Date:  2022-06-04       Impact factor: 5.682

Review 6.  Long non-coding RNAs: novel targets for nervous system disease diagnosis and therapy.

Authors:  Irfan A Qureshi; Mark F Mehler
Journal:  Neurotherapeutics       Date:  2013-10       Impact factor: 7.620

7.  Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs.

Authors:  Saakshi Jalali; Gopal Gunanathan Jayaraj; Vinod Scaria
Journal:  Biol Direct       Date:  2012-08-07       Impact factor: 4.540

8.  zflncRNApedia: A Comprehensive Online Resource for Zebrafish Long Non-Coding RNAs.

Authors:  Heena Dhiman; Shruti Kapoor; Ambily Sivadas; Sridhar Sivasubbu; Vinod Scaria
Journal:  PLoS One       Date:  2015-06-11       Impact factor: 3.240

9.  Genome-wide analysis reveals distinct patterns of epigenetic features in long non-coding RNA loci.

Authors:  Satish Sati; Sourav Ghosh; Vaibhav Jain; Vinod Scaria; Shantanu Sengupta
Journal:  Nucleic Acids Res       Date:  2012-08-25       Impact factor: 16.971

10.  Systematic transcriptome wide analysis of lncRNA-miRNA interactions.

Authors:  Saakshi Jalali; Deeksha Bhartiya; Mukesh Kumar Lalwani; Sridhar Sivasubbu; Vinod Scaria
Journal:  PLoS One       Date:  2013-02-06       Impact factor: 3.240

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