Literature DB >> 22549515

Imprints from genetic drift and mutation imply relative divergence times across marine transition zones in a pan-European small pelagic fish (Sprattus sprattus).

M T Limborg1, R Hanel, P V Debes, A K Ring, C André, C S Tsigenopoulos, D Bekkevold.   

Abstract

Geographic distributions of most temperate marine fishes are affected by postglacial recolonisation events, which have left complex genetic imprints on populations of marine species. This study investigated population structure and demographic history of European sprat (Sprattus sprattus L.) by combining inference from both mtDNA and microsatellite genetic markers throughout the species' distribution. We compared effects from genetic drift and mutation for both genetic markers in shaping genetic differentiation across four transition zones. Microsatellite markers revealed significant isolation by distance and a complex population structure across the species' distribution (overall θ(ST)=0.038, P<0.01). Across transition zones markers indicated larger effects of genetic drift over mutations in the northern distribution of sprat contrasting a stronger relative impact of mutation in the species' southern distribution in the Mediterranean region. These results were interpreted to reflect more recent divergence times between northern populations in accordance with previous findings. This study demonstrates the usefulness of comparing inference from different markers and estimators of divergence for phylogeographic and population genetic studies in species with weak genetic structure, as is the case in many marine species.

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Year:  2012        PMID: 22549515      PMCID: PMC3400746          DOI: 10.1038/hdy.2012.18

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  35 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Climate change and distribution shifts in marine fishes.

Authors:  Allison L Perry; Paula J Low; Jim R Ellis; John D Reynolds
Journal:  Science       Date:  2005-05-12       Impact factor: 47.728

3.  Life on the margin: genetic isolation and diversity loss in a peripheral marine ecosystem, the Baltic Sea.

Authors:  Kerstin Johannesson; Carl André
Journal:  Mol Ecol       Date:  2006-07       Impact factor: 6.185

Review 4.  Pillars of Hercules: is the Atlantic-Mediterranean transition a phylogeographical break?

Authors:  Tomaso Patarnello; Filip A M J Volckaert; Rita Castilho
Journal:  Mol Ecol       Date:  2007-10-01       Impact factor: 6.185

5.  Characterization of nine polymorphic microsatellite markers in sprat (Sprattus sprattus L.).

Authors:  T Dailianis; M Limborg; R Hanel; D Bekkevold; J Lagnel; A Magoulas; C S Tsigenopoulos
Journal:  Mol Ecol Resour       Date:  2008-07       Impact factor: 7.090

6.  A measure of population subdivision based on microsatellite allele frequencies.

Authors:  M Slatkin
Journal:  Genetics       Date:  1995-01       Impact factor: 4.562

7.  Evidence of microsatellite hitch-hiking selection in Atlantic cod (Gadus morhua L.): implications for inferring population structure in nonmodel organisms.

Authors:  Einar E Nielsen; Michael M Hansen; Dorte Meldrup
Journal:  Mol Ecol       Date:  2006-10       Impact factor: 6.185

8.  Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.

Authors:  K Tamura; M Nei
Journal:  Mol Biol Evol       Date:  1993-05       Impact factor: 16.240

9.  Sharp genetic break between Atlantic and English Channel populations of the polychaete Pectinaria koreni, along the North coast of France.

Authors:  M T Jolly; D Jollivet; F Gentil; E Thiébaut; F Viard
Journal:  Heredity (Edinb)       Date:  2005-01       Impact factor: 3.821

10.  Mitochondrial phylogeography of the European sprat (Sprattus sprattus L., Clupeidae) reveals isolated climatically vulnerable populations in the Mediterranean Sea and range expansion in the northeast Atlantic.

Authors:  P V Debes; F E Zachos; R Hanel
Journal:  Mol Ecol       Date:  2008-07-17       Impact factor: 6.185

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  5 in total

Review 1.  Challenges in analysis and interpretation of microsatellite data for population genetic studies.

Authors:  Alexander I Putman; Ignazio Carbone
Journal:  Ecol Evol       Date:  2014-10-30       Impact factor: 2.912

2.  Contrasted levels of genetic diversity in a benthic Mediterranean octocoral: Consequences of different demographic histories?

Authors:  Moutassem Billah Masmoudi; Lamya Chaoui; Nur Eda Topçu; Pachka Hammami; Mohamed Hichem Kara; Didier Aurelle
Journal:  Ecol Evol       Date:  2016-10-28       Impact factor: 2.912

3.  Chaotic genetic structure and past demographic expansion of the invasive gastropod Tritia neritea in its native range, the Mediterranean Sea.

Authors:  Emilie Boissin; Valentina Neglia; Sandra Baksay; Dragos Micu; Levent Bat; Bulent Topaloglu; Valentina Todorova; Marina Panayotova; Claudia Kruschel; Nataliya Milchakova; Emanuela Voutsinas; Sajmir Beqiraj; Ina Nasto; Giorgio Aglieri; Marco Taviani; Lorenzo Zane; Serge Planes
Journal:  Sci Rep       Date:  2020-12-10       Impact factor: 4.379

4.  Gene flow at major transitional areas in sea bass (Dicentrarchus labrax) and the possible emergence of a hybrid swarm.

Authors:  Nolwenn Quéré; Erick Desmarais; Costas S Tsigenopoulos; Khalid Belkhir; François Bonhomme; Bruno Guinand
Journal:  Ecol Evol       Date:  2012-11-08       Impact factor: 2.912

5.  Discovery of Genome-Wide Microsatellite Markers in Scombridae: A Pilot Study on Albacore Tuna.

Authors:  Natacha Nikolic; Stéphanie Duthoy; Antoine Destombes; Nathalie Bodin; Wendy West; Alexis Puech; Jérôme Bourjea
Journal:  PLoS One       Date:  2015-11-06       Impact factor: 3.240

  5 in total

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