Literature DB >> 22547198

Search for a diagnostic/prognostic biomarker for the brain cancer glioblastoma multiforme by 2D-DIGE-MS technique.

Hirendra Nath Banerjee1, Kelly Mahaffey, Eilena Riddick, Arnold Banerjee, Niladri Bhowmik, Manomita Patra.   

Abstract

The prognosis of patients with glioblastoma multiforme, the most malignant adult glial brain tumor, remains poor in spite of advances in treatment procedures, including surgical resection, irradiation, and chemotherapy. Genetic heterogeneity of glioblastoma warrants extensive studies to gain a thorough understanding of the biology of this tumor. While there have been several studies of global transcript profiling of glioma with the identification of gene signatures for diagnosis and disease management, translation into clinics is yet to happen. In the present study, we report a novel proteomic approach by using two-dimensional difference gel electrophoresis followed by spot picking and analysis of proteins/peptides by Mass spectrometry. We report at least ten different novel proteins/peptides as identified by this technique which are differentially expressed in this cancer and could be of further importance for diagnostic, therapeutic, and prognostic approaches.

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Year:  2012        PMID: 22547198     DOI: 10.1007/s11010-012-1319-6

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  21 in total

1.  Physiology and endocrinology symposium: a proteome-based model for sperm mobility phenotype.

Authors:  D P Froman; A J Feltmann; K Pendarvis; A M Cooksey; S C Burgess; D D Rhoads
Journal:  J Anim Sci       Date:  2010-10-29       Impact factor: 3.159

2.  Caveolin-1 overexpression enhances androgen-dependent growth and proliferation in the mouse prostate.

Authors:  Kelly G Bryant; Jeanette Camacho; Jean-François Jasmin; Chenguang Wang; Sankar Addya; Mathew C Casimiro; Paolo Fortina; Sucharitha Balasubramaniam; Karen E Knudsen; Roland Schwarting; Michael P Lisanti; Isabelle Mercier
Journal:  Int J Biochem Cell Biol       Date:  2011-05-12       Impact factor: 5.085

3.  ST101 induces a novel 17 kDa APP cleavage that precludes Aβ generation in vivo.

Authors:  Kim N Green; Hasan Khashwji; Tatiana Estrada; Frank M Laferla
Journal:  Ann Neurol       Date:  2011-03-17       Impact factor: 10.422

4.  Proteomic identification of biomarkers of vascular injury.

Authors:  Ngan F Huang; Kyle Kurpinski; Qizhi Fang; Randall J Lee; Song Li
Journal:  Am J Transl Res       Date:  2010-11-21       Impact factor: 4.060

5.  Chronic chorioamnionitis displays distinct alterations of the amniotic fluid proteome.

Authors:  Giovanna Oggé; Roberto Romero; Deug-Chan Lee; Francesca Gotsch; Nandor Gabor Than; Joonho Lee; Tinnakorn Chaiworapongsa; Zhong Dong; Pooja Mittal; Sonia S Hassan; Chong Jai Kim
Journal:  J Pathol       Date:  2010-12-24       Impact factor: 7.996

6.  Caveolin-1 and mitochondrial SOD2 (MnSOD) function as tumor suppressors in the stromal microenvironment: a new genetically tractable model for human cancer associated fibroblasts.

Authors:  Casey Trimmer; Federica Sotgia; Diana Whitaker-Menezes; Renee M Balliet; Gregory Eaton; Ubaldo E Martinez-Outschoorn; Stephanos Pavlides; Anthony Howell; Renato V Iozzo; Richard G Pestell; Philipp E Scherer; Franco Capozza; Michael P Lisanti
Journal:  Cancer Biol Ther       Date:  2011-02-15       Impact factor: 4.742

7.  Selenoprotein K is a novel target of m-calpain, and cleavage is regulated by Toll-like receptor-induced calpastatin in macrophages.

Authors:  Zhi Huang; Fukun W Hoffmann; Robert L Norton; Ann C Hashimoto; Peter R Hoffmann
Journal:  J Biol Chem       Date:  2011-08-17       Impact factor: 5.157

8.  Liver-specific loss of glucose-regulated protein 78 perturbs the unfolded protein response and exacerbates a spectrum of liver diseases in mice.

Authors:  Cheng Ji; Neil Kaplowitz; Mo Yin Lau; Eddy Kao; Lydia M Petrovic; Amy S Lee
Journal:  Hepatology       Date:  2011-07       Impact factor: 17.425

9.  Integrated hepatic transcriptome and proteome analysis of mice with high-fat diet-induced nonalcoholic fatty liver disease.

Authors:  Irina A Kirpich; Leila N Gobejishvili; Marjorie Bon Homme; Sabine Waigel; Matt Cave; Gavin Arteel; Shirish S Barve; Craig J McClain; Ion V Deaciuc
Journal:  J Nutr Biochem       Date:  2010-03-20       Impact factor: 6.048

10.  Identification of protein targets underlying dietary nitrate-induced protection against doxorubicin cardiotoxicity.

Authors:  Lei Xi; Shu-Guang Zhu; Daniel C Hobbs; Rakesh C Kukreja
Journal:  J Cell Mol Med       Date:  2011-11       Impact factor: 5.310

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  7 in total

Review 1.  Approaches for targeted proteomics and its potential applications in neuroscience.

Authors:  Sumit Sethi; Dipti Chourasia; Ishwar S Parhar
Journal:  J Biosci       Date:  2015-09       Impact factor: 1.826

2.  Comprehensive characterization of glioblastoma tumor tissues for biomarker identification using mass spectrometry-based label-free quantitative proteomics.

Authors:  Maxime S Heroux; Marla A Chesnik; Brian D Halligan; Mona Al-Gizawiy; Jennifer M Connelly; Wade M Mueller; Scott D Rand; Elizabeth J Cochran; Peter S LaViolette; Mark G Malkin; Kathleen M Schmainda; Shama P Mirza
Journal:  Physiol Genomics       Date:  2014-05-06       Impact factor: 3.107

3.  Multi-omics approaches to deciphering a hypervirulent strain of Campylobacter jejuni.

Authors:  Zuowei Wu; Orhan Sahin; Zhangqi Shen; Peng Liu; William G Miller; Qijing Zhang
Journal:  Genome Biol Evol       Date:  2013       Impact factor: 3.416

4.  Cluster and Principal Component Analysis of Human Glioblastoma Multiforme (GBM) Tumor Proteome.

Authors:  Mehdi Pooladi; Mostafa Rezaei-Tavirani; Mehrdad Hashemi; Saeed Hesami-Tackallou; Solmaz Khaghani-Razi-Abad; Afshin Moradi; Ali Reza Zali; Masoumeh Mousavi; Leila Firozi-Dalvand; Azadeh Rakhshan; Mona Zamanian Azodi
Journal:  Iran J Cancer Prev       Date:  2014

Review 5.  Mass spectrometry-based proteomics in molecular diagnostics: discovery of cancer biomarkers using tissue culture.

Authors:  Debasish Paul; Avinash Kumar; Akshada Gajbhiye; Manas K Santra; Rapole Srikanth
Journal:  Biomed Res Int       Date:  2013-03-17       Impact factor: 3.411

6.  Principal component analysis on LC‑MS/MS and 2DE‑MALDI‑TOF in glioblastoma cell lines reveals that mitochondria act as organelle sensors of the metabolic state in glioblastoma.

Authors:  Leopoldo Gómez-Caudillo; Ariadna J Ortega-Lozano; Ángel G Martínez-Batallar; Haydee Rosas-Vargas; Fernando Minauro-Sanmiguel; Sergio Encarnación-Guevara
Journal:  Oncol Rep       Date:  2020-05-27       Impact factor: 3.906

7.  Integration of RNA-Seq and proteomics data identifies glioblastoma multiforme surfaceome signature.

Authors:  Saiful Effendi Syafruddin; Wan Fahmi Wan Mohamad Nazarie; Nurshahirah Ashikin Moidu; Bee Hong Soon; M Aiman Mohtar
Journal:  BMC Cancer       Date:  2021-07-23       Impact factor: 4.430

  7 in total

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