Literature DB >> 22544630

Mycobacterium thermoresistibile as a source of thermostable orthologs of Mycobacterium tuberculosis proteins.

Thomas E Edwards1, Reiling Liao, Isabelle Phan, Peter J Myler, Christoph Grundner.   

Abstract

The genus Mycobacterium comprises major human pathogens such as the causative agent of tuberculosis, Mycobacterium tuberculosis (Mtb), and many environmental species. Tuberculosis claims ~1.5 million lives every year, and drug resistant strains of Mtb are rapidly emerging. To aid the development of new tuberculosis drugs, major efforts are currently under way to determine crystal structures of Mtb drug targets and proteins involved in pathogenicity. However, a major obstacle to obtaining crystal structures is the generation of well-diffracting crystals. Proteins from thermophiles can have better crystallization and diffraction properties than proteins from mesophiles, but their sequences and structures are often divergent. Here, we establish a thermophilic mycobacterial model organism, Mycobacterium thermoresistibile (Mth), for the study of Mtb proteins. Mth tolerates higher temperatures than Mtb or other environmental mycobacteria such as M. smegmatis. Mth proteins are on average more soluble than Mtb proteins, and comparison of the crystal structures of two pairs of orthologous proteins reveals nearly identical folds, indicating that Mth structures provide good surrogates for Mtb structures. This study introduces a thermophile as a source of protein for the study of a closely related human pathogen and marks a new approach to solving challenging mycobacterial protein structures.
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 22544630      PMCID: PMC3403447          DOI: 10.1002/pro.2084

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  12 in total

1.  Elucidation of factors responsible for enhanced thermal stability of proteins: a structural genomics based study.

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Journal:  Biochemistry       Date:  2002-06-25       Impact factor: 3.162

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Review 3.  The impact of extremophiles on structural genomics (and vice versa).

Authors:  Francis E Jenney; Michael W W Adams
Journal:  Extremophiles       Date:  2007-06-13       Impact factor: 2.395

4.  Mycobacterium thermoresistibile infection in an immunocompromised host.

Authors:  F Liu; D Andrews; D N Wright
Journal:  J Clin Microbiol       Date:  1984-04       Impact factor: 5.948

Review 5.  The tuberculosis structural genomics consortium: a structural genomics approach to drug discovery.

Authors:  Tracey L Musa; Thomas R Ioerger; James C Sacchettini
Journal:  Adv Protein Chem Struct Biol       Date:  2009-11-28       Impact factor: 3.507

6.  Mycobacterium thermoresistibile: a new pathogen for humans.

Authors:  I Weitzman; D Osadczyi; M L Corrado; D Karp
Journal:  J Clin Microbiol       Date:  1981-11       Impact factor: 5.948

7.  Structure of nitrilotriacetate monooxygenase component B from Mycobacterium thermoresistibile.

Authors:  Y Zhang; T E Edwards; D W Begley; A Abramov; K B Thompkins; M Ferrell; W J Guo; I Phan; C Olsen; A Napuli; B Sankaran; R Stacy; W C Van Voorhis; L J Stewart; P J Myler
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-08-16

8.  High-throughput protein production and purification at the Seattle Structural Genomics Center for Infectious Disease.

Authors:  Cassie M Bryan; Janhavi Bhandari; Alberto J Napuli; David J Leibly; Ryan Choi; Angela Kelley; Wesley C Van Voorhis; Thomas E Edwards; Lance J Stewart
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-08-13

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  8 in total

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Journal:  J Struct Funct Genomics       Date:  2015-04-02

3.  Ab initio structure solution of a proteolytic fragment using ARCIMBOLDO.

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5.  Genome sequence of Mycobacterium hassiacum DSM 44199, a rare source of heat-stable mycobacterial proteins.

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Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

6.  Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.

Authors:  Tommaso Moschetti; Timothy Sharpe; Gerhard Fischer; May E Marsh; Hong Kin Ng; Matthew Morgan; Duncan E Scott; Tom L Blundell; Ashok R Venkitaraman; John Skidmore; Chris Abell; Marko Hyvönen
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7.  Combining functional and structural genomics to sample the essential Burkholderia structome.

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Journal:  PLoS One       Date:  2013-01-31       Impact factor: 3.240

8.  Decoding the similarities and differences among mycobacterial species.

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  8 in total

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